CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0645
SER 770.0165
PRO 780.0119
VAL 790.0056
ALA 800.0084
GLY 810.0093
GLN 820.0064
LYS 830.0026
TYR 840.0054
ASP 850.0057
TYR 860.0047
ILE 870.0058
LEU 880.0061
VAL 890.0029
GLY 900.0028
GLY 910.0033
GLY 920.0039
THR 930.0052
ALA 940.0062
ALA 950.0069
CYS 960.0067
VAL 970.0073
LEU 980.0079
ALA 990.0095
ASN 1000.0111
ARG 1010.0100
LEU 1020.0103
SER 1030.0132
ALA 1040.0203
ASP 1050.0193
GLY 1060.0198
SER 1070.0164
LYS 1080.0099
ARG 1090.0101
VAL 1100.0058
LEU 1110.0055
VAL 1120.0053
LEU 1130.0005
GLU 1140.0039
ALA 1150.0067
GLY 1160.0128
PRO 1170.0140
ASP 1180.0140
ASN 1190.0126
THR 1200.0154
SER 1210.0107
ARG 1220.0174
ASP 1230.0105
VAL 1240.0072
LYS 1250.0064
ILE 1260.0050
PRO 1270.0043
ALA 1280.0033
ALA 1290.0044
ILE 1300.0069
THR 1310.0074
ARG 1320.0090
LEU 1330.0126
PHE 1340.0193
ARG 1350.0209
SER 1360.0221
PRO 1370.0158
LEU 1380.0157
ASP 1390.0162
TRP 1400.0133
ASN 1410.0135
LEU 1420.0111
PHE 1430.0073
SER 1440.0045
GLU 1450.0048
LEU 1460.0152
GLN 1470.0072
GLU 1480.0115
GLN 1490.0050
LEU 1500.0032
ALA 1510.0034
GLU 1520.0083
ARG 1530.0076
GLN 1540.0081
ILE 1550.0060
TYR 1560.0095
MET 1570.0102
ALA 1580.0120
ARG 1590.0121
GLY 1600.0129
ARG 1610.0087
LEU 1620.0082
LEU 1630.0085
GLY 1640.0032
GLY 1650.0041
SER 1660.0065
SER 1670.0064
ALA 1680.0069
THR 1690.0060
ASN 1700.0072
ALA 1710.0073
THR 1720.0078
LEU 1730.0060
TYR 1740.0062
HISD 1750.0065
ARG 1760.0042
GLY 1770.0037
ALA 1780.0032
ALA 1790.0088
GLY 1800.0077
ASP 1810.0073
TYR 1820.0084
ASP 1830.0092
ALA 1840.0077
TRP 1850.0073
GLY 1860.0076
VAL 1870.0071
GLU 1880.0059
GLY 1890.0039
TRP 1900.0060
SER 1910.0100
SER 1920.0107
GLU 1930.0134
ASP 1940.0087
VAL 1950.0082
LEU 1960.0086
SER 1970.0058
TRP 1980.0065
PHE 1990.0042
VAL 2000.0032
GLN 2010.0041
ALA 2020.0066
GLU 2030.0094
THR 2040.0074
ASN 2050.0062
ALA 2060.0061
ASP 2070.0035
PHE 2080.0084
GLY 2090.0068
PRO 2100.0106
GLY 2110.0133
ALA 2120.0115
TYR 2130.0110
HISH 2140.0104
GLY 2150.0087
SER 2160.0066
GLY 2170.0074
GLY 2180.0095
PRO 2190.0101
MET 2200.0102
ARG 2210.0157
VAL 2220.0111
GLU 2230.0072
ASN 2240.0067
PRO 2250.0065
ARG 2260.0152
TYR 2270.0090
THR 2280.0082
ASN 2290.0072
LYS 2300.0084
GLN 2310.0044
LEU 2320.0056
HISE 2330.0053
THR 2340.0037
ALA 2350.0041
PHE 2360.0055
PHE 2370.0037
LYS 2380.0081
ALA 2390.0110
ALA 2400.0084
GLU 2410.0120
GLU 2420.0199
VAL 2430.0179
GLY 2440.0193
LEU 2450.0111
THR 2460.0097
PRO 2470.0063
ASN 2480.0051
SER 2490.0062
ASP 2500.0074
PHE 2510.0054
ASN 2520.0060
ASP 2530.0066
TRP 2540.0041
SER 2550.0043
HISE 2560.0052
ASP 2570.0048
HISE 2580.0037
ALA 2590.0038
GLY 2600.0056
TYR 2610.0033
GLY 2620.0028
THR 2630.0039
PHE 2640.0037
GLN 2650.0041
VAL 2660.0077
MET 2670.0105
GLN 2680.0104
ASP 2690.0178
LYS 2700.0199
GLY 2710.0152
THR 2720.0074
ARG 2730.0080
ALA 2740.0098
ASP 2750.0071
MET 2760.0055
TYR 2770.0034
ARG 2780.0086
GLN 2790.0088
TYR 2800.0089
LEU 2810.0064
LYS 2820.0074
PRO 2830.0079
VAL 2840.0098
LEU 2850.0091
GLY 2860.0067
ARG 2870.0062
ARG 2880.0080
ASN 2890.0097
LEU 2900.0048
GLN 2910.0041
VAL 2920.0051
LEU 2930.0021
THR 2940.0063
GLY 2950.0079
ALA 2960.0044
ALA 2970.0041
VAL 2980.0025
THR 2990.0030
LYS 3000.0019
VAL 3010.0021
ASN 3020.0034
ILE 3030.0033
ASP 3040.0046
GLN 3050.0067
ALA 3060.0114
ALA 3070.0170
GLY 3080.0168
LYS 3090.0090
ALA 3100.0056
GLN 3110.0065
ALA 3120.0065
LEU 3130.0066
GLY 3140.0049
VAL 3150.0041
GLU 3160.0030
PHE 3170.0050
SER 3180.0062
THR 3190.0068
ASP 3200.0069
GLY 3210.0059
PRO 3220.0072
THR 3230.0141
GLY 3240.0099
GLU 3250.0145
ARG 3260.0070
LEU 3270.0055
SER 3280.0043
ALA 3290.0041
GLU 3300.0038
LEU 3310.0048
ALA 3320.0027
PRO 3330.0063
GLY 3340.0118
GLY 3350.0054
GLU 3360.0052
VAL 3370.0055
ILE 3380.0041
MET 3390.0040
CYS 3400.0041
ALA 3410.0034
GLY 3420.0035
ALA 3430.0037
VAL 3440.0028
HISD 3450.0023
THR 3460.0027
PRO 3470.0041
PHE 3480.0043
LEU 3490.0041
LEU 3500.0041
LYS 3510.0047
HISE 3520.0053
SER 3530.0039
GLY 3540.0044
VAL 3550.0053
GLY 3560.0086
PRO 3570.0083
SER 3580.0111
ALA 3590.0157
GLU 3600.0097
LEU 3610.0059
LYS 3620.0118
GLU 3630.0126
PHE 3640.0079
GLY 3650.0063
ILE 3660.0106
PRO 3670.0159
VAL 3680.0084
VAL 3690.0068
SER 3700.0060
ASN 3710.0088
LEU 3720.0095
ALA 3730.0113
GLY 3740.0080
VAL 3750.0077
GLY 3760.0080
GLN 3770.0060
ASN 3780.0058
LEU 3790.0059
GLN 3800.0037
ASP 3810.0035
GLN 3820.0033
PRO 3830.0023
ALA 3840.0013
CYS 3850.0017
LEU 3860.0044
THR 3870.0036
ALA 3880.0030
ALA 3890.0062
PRO 3900.0063
VAL 3910.0085
LYS 3920.0120
GLU 3930.0106
LYS 3940.0102
TYR 3950.0087
ASP 3960.0088
GLY 3970.0096
ILE 3980.0070
ALA 3990.0069
ILE 4000.0059
SER 4010.0073
ASP 4020.0070
HISE 4030.0055
ILE 4040.0060
TYR 4050.0085
ASN 4060.0109
GLU 4070.0124
LYS 4080.0207
GLY 4090.0146
GLN 4100.0050
ILE 4110.0057
ARG 4120.0081
LYS 4130.0106
ARG 4140.0106
ALA 4150.0081
ILE 4160.0075
ALA 4170.0106
SER 4180.0064
TYR 4190.0074
LEU 4200.0219
LEU 4210.0232
GLY 4220.0312
GLY 4230.0289
ARG 4240.0179
GLY 4250.0050
GLY 4260.0028
LEU 4270.0058
THR 4280.0070
SER 4290.0031
THR 4300.0031
GLY 4310.0032
CYS 4320.0044
ASP 4330.0037
ARG 4340.0037
GLY 4350.0030
ALA 4360.0023
PHE 4370.0034
VAL 4380.0036
ARG 4390.0036
THR 4400.0065
ALA 4410.0097
GLY 4420.0103
GLN 4430.0154
ALA 4440.0090
LEU 4450.0061
PRO 4460.0048
ASP 4470.0048
LEU 4480.0043
GLN 4490.0029
VAL 4500.0031
ARG 4510.0035
PHE 4520.0057
VAL 4530.0053
PRO 4540.0058
GLY 4550.0045
MET 4560.0027
ALA 4570.0029
LEU 4580.0128
ASP 4590.0128
PRO 4600.0075
ASP 4610.0110
GLY 4620.0127
VAL 4630.0145
SER 4640.0187
THR 4650.0155
TYR 4660.0160
VAL 4670.0218
ARG 4680.0194
PHE 4690.0124
ALA 4700.0094
LYS 4710.0123
PHE 4720.0106
GLN 4730.0135
SER 4740.0248
GLN 4750.0293
GLY 4760.0117
LEU 4770.0059
LYS 4780.0051
TRP 4790.0083
PRO 4800.0092
SER 4810.0077
GLY 4820.0061
ILE 4830.0065
THR 4840.0055
MET 4850.0041
GLN 4860.0039
LEU 4870.0036
ILE 4880.0030
ALA 4890.0032
CYS 4900.0034
ARG 4910.0052
PRO 4920.0052
GLN 4930.0061
SER 4940.0059
THR 4950.0068
GLY 4960.0070
SER 4970.0067
VAL 4980.0064
GLY 4990.0067
LEU 5000.0076
LYS 5010.0074
SER 5020.0066
ALA 5030.0096
ASP 5040.0077
PRO 5050.0068
PHE 5060.0061
ALA 5070.0075
PRO 5080.0075
PRO 5090.0061
LYS 5100.0068
LEU 5110.0047
SER 5120.0056
PRO 5130.0052
GLY 5140.0050
TYR 5150.0041
LEU 5160.0043
THR 5170.0057
ASP 5180.0063
LYS 5190.0043
ASP 5200.0064
GLY 5210.0061
ALA 5220.0065
ASP 5230.0059
LEU 5240.0041
ALA 5250.0042
THR 5260.0053
LEU 5270.0028
ARG 5280.0019
LYS 5290.0028
GLY 5300.0012
ILE 5310.0015
HISE 5320.0028
TRP 5330.0028
ALA 5340.0034
ARG 5350.0054
ASP 5360.0089
VAL 5370.0069
ALA 5380.0087
ARG 5390.0103
SER 5400.0119
SER 5410.0161
ALA 5420.0081
LEU 5430.0068
SER 5440.0088
GLU 5450.0055
TYR 5460.0067
LEU 5470.0075
ASP 5480.0064
GLY 5490.0051
GLU 5500.0047
LEU 5510.0034
PHE 5520.0023
PRO 5530.0027
GLY 5540.0023
SER 5550.0015
GLY 5560.0019
VAL 5570.0030
VAL 5580.0060
SER 5590.0034
ASP 5600.0040
ASP 5610.0057
GLN 5620.0033
ILE 5630.0036
ASP 5640.0042
GLU 5650.0059
TYR 5660.0039
ILE 5670.0028
ARG 5680.0037
ARG 5690.0038
SER 5700.0022
ILE 5710.0010
HISD 5720.0023
SER 5730.0026
SER 5740.0029
ASN 5750.0040
ALA 5760.0048
ILE 5770.0040
THR 5780.0037
GLY 5790.0043
THR 5800.0049
CYS 5810.0049
LYS 5820.0059
MET 5830.0050
GLY 5840.0096
ASN 5850.0101
ALA 5860.0169
GLY 5870.0486
ASP 5880.0244
SER 5890.0289
SER 5900.0149
SER 5910.0103
VAL 5920.0071
VAL 5930.0039
ASP 5940.0037
ASN 5950.0040
GLN 5960.0066
LEU 5970.0058
ARG 5980.0102
VAL 5990.0033
HISE 6000.0027
GLY 6010.0045
VAL 6020.0062
GLU 6030.0075
GLY 6040.0085
LEU 6050.0052
ARG 6060.0038
VAL 6070.0034
VAL 6080.0036
ASP 6090.0039
ALA 6100.0037
SER 6110.0036
VAL 6120.0031
VAL 6130.0042
PRO 6140.0045
LYS 6150.0040
ILE 6160.0045
PRO 6170.0037
GLY 6180.0031
GLY 6190.0040
GLN 6200.0031
THR 6210.0036
GLY 6220.0034
ALA 6230.0044
PRO 6240.0035
VAL 6250.0042
VAL 6260.0056
MET 6270.0045
ILE 6280.0035
ALA 6290.0046
GLU 6300.0057
ARG 6310.0042
ALA 6320.0022
ALA 6330.0067
ALA 6340.0083
LEU 6350.0047
LEU 6360.0043
THR 6370.0109
GLY 6380.0141
LYS 6390.0209
ALA 6400.0181
THR 6410.0177
ILE 6420.0191
GLY 6430.0335
ALA 6440.0645
SER 6450.0171
ALA 6460.0242
ALA 6470.0175
ALA 6480.0241
PRO 6490.0186

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.