CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0493
SER 770.0149
PRO 780.0157
VAL 790.0155
ALA 800.0174
GLY 810.0160
GLN 820.0120
LYS 830.0030
TYR 840.0081
ASP 850.0123
TYR 860.0078
ILE 870.0084
LEU 880.0112
VAL 890.0050
GLY 900.0041
GLY 910.0031
GLY 920.0026
THR 930.0041
ALA 940.0028
ALA 950.0028
CYS 960.0028
VAL 970.0030
LEU 980.0056
ALA 990.0065
ASN 1000.0068
ARG 1010.0069
LEU 1020.0103
SER 1030.0100
ALA 1040.0165
ASP 1050.0289
GLY 1060.0308
SER 1070.0328
LYS 1080.0162
ARG 1090.0033
VAL 1100.0065
LEU 1110.0086
VAL 1120.0089
LEU 1130.0054
GLU 1140.0039
ALA 1150.0028
GLY 1160.0029
PRO 1170.0023
ASP 1180.0024
ASN 1190.0063
THR 1200.0068
SER 1210.0087
ARG 1220.0115
ASP 1230.0119
VAL 1240.0119
LYS 1250.0078
ILE 1260.0061
PRO 1270.0055
ALA 1280.0070
ALA 1290.0097
ILE 1300.0105
THR 1310.0087
ARG 1320.0094
LEU 1330.0099
PHE 1340.0055
ARG 1350.0087
SER 1360.0106
PRO 1370.0095
LEU 1380.0077
ASP 1390.0047
TRP 1400.0059
ASN 1410.0078
LEU 1420.0098
PHE 1430.0121
SER 1440.0128
GLU 1450.0126
LEU 1460.0182
GLN 1470.0078
GLU 1480.0163
GLN 1490.0100
LEU 1500.0106
ALA 1510.0155
GLU 1520.0089
ARG 1530.0086
GLN 1540.0180
ILE 1550.0088
TYR 1560.0080
MET 1570.0079
ALA 1580.0058
ARG 1590.0038
GLY 1600.0034
ARG 1610.0063
LEU 1620.0043
LEU 1630.0041
GLY 1640.0043
GLY 1650.0044
SER 1660.0065
SER 1670.0099
ALA 1680.0076
THR 1690.0100
ASN 1700.0099
ALA 1710.0076
THR 1720.0073
LEU 1730.0024
TYR 1740.0022
HISD 1750.0018
ARG 1760.0070
GLY 1770.0077
ALA 1780.0074
ALA 1790.0138
GLY 1800.0162
ASP 1810.0125
TYR 1820.0090
ASP 1830.0110
ALA 1840.0179
TRP 1850.0107
GLY 1860.0092
VAL 1870.0114
GLU 1880.0122
GLY 1890.0106
TRP 1900.0101
SER 1910.0127
SER 1920.0078
GLU 1930.0189
ASP 1940.0134
VAL 1950.0094
LEU 1960.0113
SER 1970.0092
TRP 1980.0064
PHE 1990.0052
VAL 2000.0074
GLN 2010.0041
ALA 2020.0052
GLU 2030.0070
THR 2040.0052
ASN 2050.0042
ALA 2060.0059
ASP 2070.0052
PHE 2080.0050
GLY 2090.0040
PRO 2100.0128
GLY 2110.0193
ALA 2120.0120
TYR 2130.0099
HISH 2140.0090
GLY 2150.0094
SER 2160.0087
GLY 2170.0077
GLY 2180.0079
PRO 2190.0083
MET 2200.0086
ARG 2210.0089
VAL 2220.0051
GLU 2230.0033
ASN 2240.0041
PRO 2250.0059
ARG 2260.0119
TYR 2270.0122
THR 2280.0098
ASN 2290.0066
LYS 2300.0123
GLN 2310.0176
LEU 2320.0126
HISE 2330.0102
THR 2340.0127
ALA 2350.0139
PHE 2360.0099
PHE 2370.0109
LYS 2380.0100
ALA 2390.0074
ALA 2400.0044
GLU 2410.0064
GLU 2420.0150
VAL 2430.0133
GLY 2440.0124
LEU 2450.0070
THR 2460.0081
PRO 2470.0080
ASN 2480.0043
SER 2490.0068
ASP 2500.0051
PHE 2510.0032
ASN 2520.0039
ASP 2530.0035
TRP 2540.0085
SER 2550.0088
HISE 2560.0087
ASP 2570.0046
HISE 2580.0053
ALA 2590.0033
GLY 2600.0046
TYR 2610.0042
GLY 2620.0056
THR 2630.0032
PHE 2640.0024
GLN 2650.0029
VAL 2660.0038
MET 2670.0057
GLN 2680.0043
ASP 2690.0033
LYS 2700.0074
GLY 2710.0108
THR 2720.0056
ARG 2730.0083
ALA 2740.0108
ASP 2750.0102
MET 2760.0080
TYR 2770.0052
ARG 2780.0125
GLN 2790.0116
TYR 2800.0098
LEU 2810.0094
LYS 2820.0152
PRO 2830.0221
VAL 2840.0119
LEU 2850.0119
GLY 2860.0132
ARG 2870.0179
ARG 2880.0191
ASN 2890.0145
LEU 2900.0057
GLN 2910.0097
VAL 2920.0103
LEU 2930.0091
THR 2940.0056
GLY 2950.0037
ALA 2960.0044
ALA 2970.0039
VAL 2980.0014
THR 2990.0033
LYS 3000.0019
VAL 3010.0028
ASN 3020.0075
ILE 3030.0088
ASP 3040.0148
GLN 3050.0172
ALA 3060.0157
ALA 3070.0166
GLY 3080.0100
LYS 3090.0081
ALA 3100.0100
GLN 3110.0088
ALA 3120.0062
LEU 3130.0092
GLY 3140.0025
VAL 3150.0015
GLU 3160.0006
PHE 3170.0085
SER 3180.0102
THR 3190.0100
ASP 3200.0131
GLY 3210.0139
PRO 3220.0169
THR 3230.0271
GLY 3240.0240
GLU 3250.0336
ARG 3260.0123
LEU 3270.0071
SER 3280.0067
ALA 3290.0083
GLU 3300.0066
LEU 3310.0063
ALA 3320.0166
PRO 3330.0354
GLY 3340.0422
GLY 3350.0094
GLU 3360.0085
VAL 3370.0079
ILE 3380.0055
MET 3390.0060
CYS 3400.0064
ALA 3410.0075
GLY 3420.0065
ALA 3430.0054
VAL 3440.0046
HISD 3450.0065
THR 3460.0059
PRO 3470.0026
PHE 3480.0036
LEU 3490.0056
LEU 3500.0032
LYS 3510.0017
HISE 3520.0041
SER 3530.0045
GLY 3540.0032
VAL 3550.0024
GLY 3560.0048
PRO 3570.0126
SER 3580.0143
ALA 3590.0181
GLU 3600.0146
LEU 3610.0044
LYS 3620.0015
GLU 3630.0130
PHE 3640.0118
GLY 3650.0094
ILE 3660.0086
PRO 3670.0114
VAL 3680.0062
VAL 3690.0081
SER 3700.0035
ASN 3710.0096
LEU 3720.0072
ALA 3730.0151
GLY 3740.0115
VAL 3750.0096
GLY 3760.0109
GLN 3770.0112
ASN 3780.0139
LEU 3790.0116
GLN 3800.0076
ASP 3810.0048
GLN 3820.0033
PRO 3830.0010
ALA 3840.0011
CYS 3850.0014
LEU 3860.0031
THR 3870.0038
ALA 3880.0043
ALA 3890.0038
PRO 3900.0034
VAL 3910.0037
LYS 3920.0053
GLU 3930.0056
LYS 3940.0046
TYR 3950.0043
ASP 3960.0037
GLY 3970.0038
ILE 3980.0036
ALA 3990.0046
ILE 4000.0053
SER 4010.0041
ASP 4020.0047
HISE 4030.0052
ILE 4040.0023
TYR 4050.0032
ASN 4060.0037
GLU 4070.0073
LYS 4080.0094
GLY 4090.0070
GLN 4100.0024
ILE 4110.0056
ARG 4120.0081
LYS 4130.0172
ARG 4140.0182
ALA 4150.0193
ILE 4160.0126
ALA 4170.0110
SER 4180.0070
TYR 4190.0044
LEU 4200.0071
LEU 4210.0035
GLY 4220.0192
GLY 4230.0200
ARG 4240.0098
GLY 4250.0058
GLY 4260.0068
LEU 4270.0078
THR 4280.0089
SER 4290.0062
THR 4300.0063
GLY 4310.0029
CYS 4320.0020
ASP 4330.0020
ARG 4340.0034
GLY 4350.0036
ALA 4360.0041
PHE 4370.0055
VAL 4380.0065
ARG 4390.0070
THR 4400.0050
ALA 4410.0070
GLY 4420.0111
GLN 4430.0158
ALA 4440.0137
LEU 4450.0147
PRO 4460.0082
ASP 4470.0058
LEU 4480.0058
GLN 4490.0033
VAL 4500.0039
ARG 4510.0037
PHE 4520.0077
VAL 4530.0065
PRO 4540.0056
GLY 4550.0021
MET 4560.0009
ALA 4570.0027
LEU 4580.0044
ASP 4590.0043
PRO 4600.0041
ASP 4610.0045
GLY 4620.0049
VAL 4630.0057
SER 4640.0057
THR 4650.0053
TYR 4660.0063
VAL 4670.0063
ARG 4680.0065
PHE 4690.0064
ALA 4700.0081
LYS 4710.0090
PHE 4720.0083
GLN 4730.0078
SER 4740.0125
GLN 4750.0123
GLY 4760.0027
LEU 4770.0027
LYS 4780.0029
TRP 4790.0043
PRO 4800.0037
SER 4810.0032
GLY 4820.0041
ILE 4830.0048
THR 4840.0050
MET 4850.0039
GLN 4860.0032
LEU 4870.0033
ILE 4880.0028
ALA 4890.0026
CYS 4900.0033
ARG 4910.0046
PRO 4920.0007
GLN 4930.0041
SER 4940.0044
THR 4950.0106
GLY 4960.0123
SER 4970.0130
VAL 4980.0074
GLY 4990.0077
LEU 5000.0094
LYS 5010.0194
SER 5020.0187
ALA 5030.0055
ASP 5040.0104
PRO 5050.0130
PHE 5060.0174
ALA 5070.0167
PRO 5080.0247
PRO 5090.0136
LYS 5100.0131
LEU 5110.0089
SER 5120.0091
PRO 5130.0091
GLY 5140.0080
TYR 5150.0037
LEU 5160.0036
THR 5170.0050
ASP 5180.0167
LYS 5190.0080
ASP 5200.0229
GLY 5210.0151
ALA 5220.0102
ASP 5230.0055
LEU 5240.0052
ALA 5250.0080
THR 5260.0034
LEU 5270.0026
ARG 5280.0066
LYS 5290.0078
GLY 5300.0054
ILE 5310.0068
HISE 5320.0083
TRP 5330.0086
ALA 5340.0081
ARG 5350.0079
ASP 5360.0097
VAL 5370.0051
ALA 5380.0041
ARG 5390.0068
SER 5400.0099
SER 5410.0192
ALA 5420.0143
LEU 5430.0108
SER 5440.0088
GLU 5450.0106
TYR 5460.0105
LEU 5470.0059
ASP 5480.0018
GLY 5490.0026
GLU 5500.0052
LEU 5510.0044
PHE 5520.0041
PRO 5530.0037
GLY 5540.0069
SER 5550.0042
GLY 5560.0041
VAL 5570.0042
VAL 5580.0056
SER 5590.0063
ASP 5600.0075
ASP 5610.0068
GLN 5620.0058
ILE 5630.0037
ASP 5640.0041
GLU 5650.0062
TYR 5660.0046
ILE 5670.0045
ARG 5680.0057
ARG 5690.0063
SER 5700.0057
ILE 5710.0055
HISD 5720.0028
SER 5730.0018
SER 5740.0018
ASN 5750.0031
ALA 5760.0045
ILE 5770.0046
THR 5780.0101
GLY 5790.0116
THR 5800.0103
CYS 5810.0105
LYS 5820.0108
MET 5830.0111
GLY 5840.0118
ASN 5850.0214
ALA 5860.0493
GLY 5870.0185
ASP 5880.0157
SER 5890.0150
SER 5900.0099
SER 5910.0115
VAL 5920.0098
VAL 5930.0086
ASP 5940.0088
ASN 5950.0106
GLN 5960.0055
LEU 5970.0055
ARG 5980.0058
VAL 5990.0072
HISE 6000.0076
GLY 6010.0069
VAL 6020.0068
GLU 6030.0042
GLY 6040.0025
LEU 6050.0037
ARG 6060.0036
VAL 6070.0041
VAL 6080.0036
ASP 6090.0044
ALA 6100.0054
SER 6110.0079
VAL 6120.0086
VAL 6130.0098
PRO 6140.0144
LYS 6150.0108
ILE 6160.0072
PRO 6170.0058
GLY 6180.0067
GLY 6190.0059
GLN 6200.0032
THR 6210.0039
GLY 6220.0055
ALA 6230.0041
PRO 6240.0039
VAL 6250.0046
VAL 6260.0041
MET 6270.0037
ILE 6280.0042
ALA 6290.0030
GLU 6300.0017
ARG 6310.0038
ALA 6320.0079
ALA 6330.0073
ALA 6340.0081
LEU 6350.0115
LEU 6360.0120
THR 6370.0118
GLY 6380.0170
LYS 6390.0143
ALA 6400.0141
THR 6410.0024
ILE 6420.0039
GLY 6430.0058
ALA 6440.0189
SER 6450.0046
ALA 6460.0047
ALA 6470.0043
ALA 6480.0150
PRO 6490.0053

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.