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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2188
ARG 100.0098
VAL 110.0098
LYS 120.0099
ILE 130.0097
GLY 140.0111
HIS 150.0109
TYR 160.0091
ILE 170.0088
LEU 180.0073
GLY 190.0062
ASP 200.0046
THR 210.0044
LEU 220.0032
GLY 230.0033
VAL 240.0040
GLY 250.0039
THR 260.0045
PHE 270.0058
GLY 280.0057
LYS 290.0051
VAL 300.0043
LYS 310.0047
VAL 320.0050
GLY 330.0065
LYS 340.0077
HIS 350.0094
GLU 360.0105
LEU 370.0118
THR 380.0110
GLY 390.0092
HIS 400.0086
LYS 410.0068
VAL 420.0061
ALA 430.0047
VAL 440.0052
LYS 450.0048
ILE 460.0062
LEU 470.0070
ASN 480.0086
ARG 490.0096
GLN 500.0105
LYS 510.0093
ILE 520.0085
ARG 530.0099
SER 540.0107
LEU 550.0095
ASP 560.0087
VAL 570.0070
VAL 580.0071
GLY 590.0059
LYS 600.0050
ILE 610.0047
ARG 620.0050
ARG 630.0037
GLU 640.0032
ILE 650.0040
GLN 660.0039
ASN 670.0029
LEU 680.0033
LYS 690.0045
LEU 700.0046
PHE 710.0043
ARG 720.0054
HIS 730.0054
PRO 740.0060
HIS 750.0052
ILE 760.0042
ILE 770.0039
LYS 780.0047
LEU 790.0049
TYR 800.0064
GLN 810.0069
VAL 820.0070
ILE 830.0085
SER 840.0093
THR 850.0106
PRO 860.0117
SER 870.0109
ASP 880.0092
ILE 890.0079
PHE 900.0071
MET 910.0056
VAL 920.0059
MET 930.0050
GLU 940.0051
TYR 950.0047
VAL 960.0047
SER 970.0045
GLY 980.0045
GLY 990.0034
GLU 1000.0038
LEU 1010.0049
PHE 1020.0049
ASP 1030.0049
TYR 1040.0058
ILE 1050.0064
CYS 1060.0066
LYS 1070.0066
ASN 1080.0077
GLY 1090.0085
ARG 1100.0082
LEU 1110.0083
ASP 1120.0093
GLU 1130.0095
LYS 1140.0095
GLU 1150.0084
SER 1160.0078
ARG 1170.0080
ARG 1180.0078
LEU 1190.0067
PHE 1200.0066
GLN 1210.0068
GLN 1220.0062
ILE 1230.0054
LEU 1240.0056
SER 1250.0057
GLY 1260.0047
VAL 1270.0043
ASP 1280.0048
TYR 1290.0044
CYS 1300.0034
HIS 1310.0035
ARG 1320.0039
HIS 1330.0032
MET 1340.0026
VAL 1350.0024
VAL 1360.0027
HIS 1370.0027
ARG 1380.0033
ASP 1390.0036
LEU 1400.0038
LYS 1410.0043
PRO 1420.0045
GLU 1430.0036
ASN 1440.0030
VAL 1450.0038
LEU 1460.0038
LEU 1470.0049
ASP 1480.0055
ALA 1490.0064
HIS 1500.0073
MET 1510.0065
ASN 1520.0062
ALA 1530.0053
LYS 1540.0044
ILE 1550.0035
ALA 1560.0026
ASP 1570.0022
PHE 1580.0022
GLY 1590.0028
LEU 1600.0030
SER 1610.0024
ASN 1620.0024
MET 1630.0020
MET 1640.0024
SER 1650.0024
ASP 1660.0025
GLY 1670.0024
GLU 1680.0025
PHE 1690.0026
LEU 1700.0029
ARG 1710.0037
SER 1730.0045
CYS 1740.0041
GLY 1750.0043
SER 1760.0049
PRO 1770.0061
ASN 1780.0062
TYR 1790.0056
ALA 1800.0054
ALA 1810.0058
PRO 1820.0065
GLU 1830.0058
VAL 1840.0052
ILE 1850.0063
SER 1860.0065
GLY 1870.0054
ARG 1880.0045
LEU 1890.0036
TYR 1900.0037
ALA 1910.0033
GLY 1920.0034
PRO 1930.0040
GLU 1940.0048
VAL 1950.0046
ASP 1960.0044
ILE 1970.0054
TRP 1980.0059
SER 1990.0053
SER 2000.0056
GLY 2010.0067
VAL 2020.0067
ILE 2030.0061
LEU 2040.0071
TYR 2050.0078
ALA 2060.0071
LEU 2070.0072
LEU 2080.0085
CYS 2090.0087
GLY 2100.0078
THR 2110.0078
LEU 2120.0076
PRO 2130.0084
PHE 2140.0082
ASP 2150.0083
ASP 2160.0091
ASP 2170.0092
HIS 2180.0098
VAL 2190.0087
PRO 2200.0094
THR 2210.0100
LEU 2220.0089
PHE 2230.0083
LYS 2240.0094
LYS 2250.0094
ILE 2260.0083
CYS 2270.0085
ASP 2280.0095
GLY 2290.0093
ILE 2300.0101
PHE 2310.0099
TYR 2320.0106
THR 2330.0105
PRO 2340.0112
GLN 2350.0120
TYR 2360.0116
LEU 2370.0108
ASN 2380.0111
PRO 2390.0113
SER 2400.0107
VAL 2410.0096
ILE 2420.0099
SER 2430.0099
LEU 2440.0087
LEU 2450.0085
LYS 2460.0090
HIS 2470.0083
MET 2480.0073
LEU 2490.0076
GLN 2500.0078
VAL 2510.0076
ASP 2520.0071
PRO 2530.0059
MET 2540.0058
LYS 2550.0072
ARG 2560.0069
ALA 2570.0069
THR 2580.0061
ILE 2590.0059
LYS 2600.0065
ASP 2610.0072
ILE 2620.0072
ARG 2630.0071
GLU 2640.0083
HIS 2650.0088
GLU 2660.0100
TRP 2670.0096
PHE 2680.0086
LYS 2690.0092
GLN 2700.0098
ASP 2710.0097
LEU 2720.0082
PRO 2730.0082
LYS 2740.0077
TYR 2750.0077
LEU 2760.0070
PHE 2770.0061
PRO 2780.0062
GLU 2790.0032
ASP 2800.0052
ALA 3210.2188
VAL 3220.1733
ALA 3230.1367
TYR 3240.1228
HIS 3250.1006
LEU 3260.0764
ILE 3270.0703
ILE 3280.0587
ASP 3290.0348
ASN 3300.0269
ARG 3310.0170
ARG 3320.0132
ILE 3330.0014
MET 3340.0006
ASN 3350.0058
GLU 3360.0062
ALA 3370.0054
LYS 3380.0052
ASP 3390.0046
PHE 3400.0039
TYR 3410.0038
LEU 3420.0040
ALA 3430.0030
THR 3440.0020
SER 3450.0038
PRO 3460.0088
PRO 3470.0142
ASP 3480.0190
SER 3490.0270
PHE 3500.0332
LEU 3510.0403
ASP 3520.0393
ASP 3530.0462
HIS 3540.0406
HIS 3550.0317
LEU 3560.0317
THR 3570.0233
ARG 3580.0231
PRO 3590.0191
HIS 3600.0173
PRO 3610.0211
GLU 3620.0170
ARG 3630.0138
VAL 3640.0196
PRO 3650.0191
PHE 3660.0139
LEU 3670.0182
VAL 3680.0268
ALA 3690.0266
GLU 3700.0259
THR 3710.0299
PRO 3720.0394
ARG 3730.0470
ALA 3740.0427
ALA 3940.0036
LYS 3950.0034
TRP 3960.0030
HIS 3970.0028
LEU 3980.0024
GLY 3990.0021
ILE 4000.0023
ARG 4010.0023
SER 4020.0023
GLN 4030.0024
SER 4040.0022
ARG 4050.0020
PRO 4060.0019
ASN 4070.0022
ASP 4080.0024
ILE 4090.0022
MET 4100.0023
ALA 4110.0028
GLU 4120.0028
VAL 4130.0026
CYS 4140.0029
ARG 4150.0034
ALA 4160.0032
ILE 4170.0031
LYS 4180.0037
GLN 4190.0038
LEU 4200.0036
ASP 4210.0038
TYR 4220.0033
GLU 4230.0034
TRP 4240.0031
LYS 4250.0032
VAL 4260.0031
VAL 4270.0031
ASN 4280.0029
PRO 4290.0027
TYR 4300.0023
TYR 4310.0023
LEU 4320.0024
ARG 4330.0026
VAL 4340.0026
ARG 4350.0028
ARG 4360.0029
LYS 4370.0032
ASN 4380.0031
PRO 4390.0037
VAL 4400.0035
THR 4410.0031
SER 4420.0034
THR 4430.0029
PHE 4440.0029
SER 4450.0024
LYS 4460.0023
MET 4470.0021
SER 4480.0020
LEU 4490.0019
GLN 4500.0020
LEU 4510.0019
TYR 4520.0021
GLN 4530.0022
VAL 4540.0025
ASP 4550.0028
SER 4560.0026
ARG 4570.0023
THR 4580.0023
TYR 4590.0020
LEU 4600.0020
LEU 4610.0018
ASP 4620.0019
PHE 4630.0019
ARG 4640.0019
SER 4650.0019
ILE 4660.0022
ASP 4670.0024
ASP 4680.0028
GLU 4690.0032
ILE 4700.0038
LYS 2030.0030
SER 2040.0024
PRO 2050.0023
PRO 2060.0026
ILE 2070.0028
LEU 2080.0027
PRO 2090.0030
PRO 2100.0033
HIS 2110.0032
LEU 2120.0024
LEU 2130.0026
GLN 2140.0028
VAL 2150.0028
ILE 2160.0028
LEU 2170.0027
ASN 2180.0025
LYS 2190.0025
ASP 2200.0028
THR 2210.0036
ASN 2220.0073
ILE 2230.0110
SER 2240.0124
CYS 2250.0093
ASP 2260.0105
PRO 2270.0079
ALA 2280.0079
LEU 2290.0060
LEU 2300.0032
PRO 2310.0028
GLU 2320.0034
PRO 2330.0030
ASN 2340.0030
HIS 2350.0029
VAL 2360.0027
MET 2370.0026
LEU 2380.0025
ASN 2390.0022
HIS 2400.0022
LEU 2410.0021
TYR 2420.0024
ALA 2430.0027
LEU 2440.0031
SER 2450.0035
ILE 2460.0036
LYS 2470.0042
ASP 2480.0046
SER 2490.0042
VAL 2500.0038
MET 2510.0032
VAL 2520.0030
LEU 2530.0025
SER 2540.0024
ALA 2550.0023
THR 2560.0025
HIS 2570.0024
ARG 2580.0027
TYR 2590.0029
LYS 2600.0036
LYS 2610.0034
LYS 2620.0032
TYR 2630.0029
VAL 2640.0028
THR 2650.0027
THR 2660.0024
LEU 2670.0026
LEU 2680.0026
TYR 2690.0031
LYS 2700.0032
PRO 2710.0037
PRO 5280.0024
GLY 5290.0022
SER 5300.0020
HIS 5310.0020
THR 5320.0020
ILE 5330.0021
GLU 5340.0022
PHE 5350.0020
PHE 5360.0022
GLU 5370.0025
MET 5380.0024
CYS 5390.0023
ALA 5400.0027
ASN 5410.0030
LEU 5420.0027
ILE 5430.0027
LYS 5440.0033
ILE 5450.0033
LEU 5460.0029
ALA 5470.0032
GLN 5480.0037

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.