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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0535
ARG 100.0222
VAL 110.0131
LYS 120.0057
ILE 130.0087
GLY 140.0245
HIS 150.0172
TYR 160.0041
ILE 170.0048
LEU 180.0118
GLY 190.0248
ASP 200.0415
THR 210.0420
LEU 220.0331
GLY 230.0302
VAL 240.0440
GLY 250.0148
THR 260.0121
PHE 270.0132
GLY 280.0163
LYS 290.0167
VAL 300.0095
LYS 310.0121
VAL 320.0091
GLY 330.0113
LYS 340.0143
HIS 350.0094
GLU 360.0138
LEU 370.0136
THR 380.0345
GLY 390.0328
HIS 400.0208
LYS 410.0180
VAL 420.0139
ALA 430.0070
VAL 440.0098
LYS 450.0087
ILE 460.0105
LEU 470.0093
ASN 480.0107
ARG 490.0092
GLN 500.0064
LYS 510.0092
ILE 520.0112
ARG 530.0080
SER 540.0202
LEU 550.0088
ASP 560.0143
VAL 570.0265
VAL 580.0235
GLY 590.0266
LYS 600.0300
ILE 610.0236
ARG 620.0334
ARG 630.0251
GLU 640.0154
ILE 650.0169
GLN 660.0201
ASN 670.0163
LEU 680.0154
LYS 690.0155
LEU 700.0159
PHE 710.0155
ARG 720.0183
HIS 730.0098
PRO 740.0097
HIS 750.0089
ILE 760.0124
ILE 770.0142
LYS 780.0153
LEU 790.0187
TYR 800.0168
GLN 810.0177
VAL 820.0170
ILE 830.0094
SER 840.0054
THR 850.0088
PRO 860.0139
SER 870.0161
ASP 880.0117
ILE 890.0085
PHE 900.0095
MET 910.0097
VAL 920.0110
MET 930.0133
GLU 940.0123
TYR 950.0107
VAL 960.0091
SER 970.0134
GLY 980.0146
GLY 990.0156
GLU 1000.0158
LEU 1010.0158
PHE 1020.0164
ASP 1030.0192
TYR 1040.0197
ILE 1050.0169
CYS 1060.0223
LYS 1070.0331
ASN 1080.0338
GLY 1090.0195
ARG 1100.0163
LEU 1110.0182
ASP 1120.0146
GLU 1130.0061
LYS 1140.0112
GLU 1150.0119
SER 1160.0114
ARG 1170.0096
ARG 1180.0096
LEU 1190.0081
PHE 1200.0085
GLN 1210.0086
GLN 1220.0081
ILE 1230.0083
LEU 1240.0119
SER 1250.0083
GLY 1260.0098
VAL 1270.0118
ASP 1280.0106
TYR 1290.0102
CYS 1300.0125
HIS 1310.0124
ARG 1320.0111
HIS 1330.0141
MET 1340.0154
VAL 1350.0149
VAL 1360.0115
HIS 1370.0079
ARG 1380.0072
ASP 1390.0033
LEU 1400.0052
LYS 1410.0078
PRO 1420.0111
GLU 1430.0122
ASN 1440.0113
VAL 1450.0069
LEU 1460.0089
LEU 1470.0103
ASP 1480.0160
ALA 1490.0201
HIS 1500.0269
MET 1510.0102
ASN 1520.0071
ALA 1530.0053
LYS 1540.0082
ILE 1550.0075
ALA 1560.0090
ASP 1570.0117
PHE 1580.0089
GLY 1590.0097
LEU 1600.0086
SER 1610.0101
ASN 1620.0137
MET 1630.0160
MET 1640.0157
SER 1650.0155
ASP 1660.0103
GLY 1670.0094
GLU 1680.0102
PHE 1690.0103
LEU 1700.0112
ARG 1710.0103
SER 1730.0048
CYS 1740.0048
GLY 1750.0062
SER 1760.0072
PRO 1770.0094
ASN 1780.0117
TYR 1790.0090
ALA 1800.0090
ALA 1810.0099
PRO 1820.0110
GLU 1830.0094
VAL 1840.0071
ILE 1850.0081
SER 1860.0102
GLY 1870.0076
ARG 1880.0097
LEU 1890.0095
TYR 1900.0095
ALA 1910.0132
GLY 1920.0107
PRO 1930.0102
GLU 1940.0094
VAL 1950.0084
ASP 1960.0079
ILE 1970.0098
TRP 1980.0099
SER 1990.0101
SER 2000.0101
GLY 2010.0097
VAL 2020.0105
ILE 2030.0099
LEU 2040.0077
TYR 2050.0078
ALA 2060.0091
LEU 2070.0085
LEU 2080.0084
CYS 2090.0075
GLY 2100.0098
THR 2110.0102
LEU 2120.0109
PRO 2130.0106
PHE 2140.0109
ASP 2150.0117
ASP 2160.0041
ASP 2170.0087
HIS 2180.0106
VAL 2190.0027
PRO 2200.0116
THR 2210.0076
LEU 2220.0068
PHE 2230.0120
LYS 2240.0104
LYS 2250.0103
ILE 2260.0123
CYS 2270.0115
ASP 2280.0108
GLY 2290.0120
ILE 2300.0234
PHE 2310.0130
TYR 2320.0145
THR 2330.0214
PRO 2340.0331
GLN 2350.0535
TYR 2360.0253
LEU 2370.0138
ASN 2380.0110
PRO 2390.0128
SER 2400.0084
VAL 2410.0034
ILE 2420.0075
SER 2430.0073
LEU 2440.0052
LEU 2450.0080
LYS 2460.0084
HIS 2470.0072
MET 2480.0085
LEU 2490.0093
GLN 2500.0088
VAL 2510.0086
ASP 2520.0066
PRO 2530.0057
MET 2540.0031
LYS 2550.0046
ARG 2560.0056
ALA 2570.0040
THR 2580.0041
ILE 2590.0083
LYS 2600.0102
ASP 2610.0088
ILE 2620.0102
ARG 2630.0162
GLU 2640.0203
HIS 2650.0166
GLU 2660.0233
TRP 2670.0135
PHE 2680.0142
LYS 2690.0292
GLN 2700.0276
ASP 2710.0372
LEU 2720.0322
PRO 2730.0198
LYS 2740.0127
TYR 2750.0046
LEU 2760.0075
PHE 2770.0055
PRO 2780.0152
GLU 2790.0095
ASP 2800.0263
ALA 3210.0141
VAL 3220.0152
ALA 3230.0133
TYR 3240.0156
HIS 3250.0245
LEU 3260.0198
ILE 3270.0095
ILE 3280.0225
ASP 3290.0289
ASN 3300.0219
ARG 3310.0095
ARG 3320.0157
ILE 3330.0284
MET 3340.0156
ASN 3350.0093
GLU 3360.0184
ALA 3370.0097
LYS 3380.0148
ASP 3390.0221
PHE 3400.0165
TYR 3410.0145
LEU 3420.0148
ALA 3430.0157
THR 3440.0201
SER 3450.0188
PRO 3460.0215
PRO 3470.0218
ASP 3480.0297
SER 3490.0401
PHE 3500.0284
LEU 3510.0456
ASP 3520.0420
ASP 3530.0424
HIS 3540.0403
HIS 3550.0339
LEU 3560.0344
THR 3570.0215
ARG 3580.0229
PRO 3590.0293
HIS 3600.0265
PRO 3610.0269
GLU 3620.0182
ARG 3630.0085
VAL 3640.0133
PRO 3650.0170
PHE 3660.0115
LEU 3670.0089
VAL 3680.0081
ALA 3690.0140
GLU 3700.0197
THR 3710.0200
PRO 3720.0189
ARG 3730.0051
ALA 3740.0142
ALA 3940.0259
LYS 3950.0179
TRP 3960.0102
HIS 3970.0064
LEU 3980.0037
GLY 3990.0032
ILE 4000.0049
ARG 4010.0048
SER 4020.0055
GLN 4030.0084
SER 4040.0029
ARG 4050.0049
PRO 4060.0047
ASN 4070.0036
ASP 4080.0029
ILE 4090.0022
MET 4100.0033
ALA 4110.0034
GLU 4120.0019
VAL 4130.0041
CYS 4140.0065
ARG 4150.0062
ALA 4160.0063
ILE 4170.0079
LYS 4180.0095
GLN 4190.0100
LEU 4200.0102
ASP 4210.0082
TYR 4220.0058
GLU 4230.0035
TRP 4240.0052
LYS 4250.0046
VAL 4260.0054
VAL 4270.0058
ASN 4280.0070
PRO 4290.0073
TYR 4300.0045
TYR 4310.0040
LEU 4320.0036
ARG 4330.0033
VAL 4340.0039
ARG 4350.0030
ARG 4360.0039
LYS 4370.0018
ASN 4380.0024
PRO 4390.0023
VAL 4400.0029
THR 4410.0061
SER 4420.0048
THR 4430.0058
PHE 4440.0054
SER 4450.0054
LYS 4460.0051
MET 4470.0055
SER 4480.0009
LEU 4490.0013
GLN 4500.0026
LEU 4510.0049
TYR 4520.0046
GLN 4530.0052
VAL 4540.0057
ASP 4550.0082
SER 4560.0116
ARG 4570.0071
THR 4580.0062
TYR 4590.0063
LEU 4600.0025
LEU 4610.0026
ASP 4620.0026
PHE 4630.0021
ARG 4640.0034
SER 4650.0044
ILE 4660.0119
ASP 4670.0151
ASP 4680.0149
GLU 4690.0244
ILE 4700.0314
LYS 2030.0167
SER 2040.0081
PRO 2050.0070
PRO 2060.0037
ILE 2070.0033
LEU 2080.0030
PRO 2090.0040
PRO 2100.0041
HIS 2110.0049
LEU 2120.0020
LEU 2130.0021
GLN 2140.0035
VAL 2150.0037
ILE 2160.0044
LEU 2170.0046
ASN 2180.0090
LYS 2190.0083
ASP 2200.0086
THR 2210.0193
ASN 2220.0205
ILE 2230.0210
SER 2240.0229
CYS 2250.0219
ASP 2260.0205
PRO 2270.0164
ALA 2280.0175
LEU 2290.0180
LEU 2300.0099
PRO 2310.0069
GLU 2320.0073
PRO 2330.0062
ASN 2340.0073
HIS 2350.0080
VAL 2360.0079
MET 2370.0062
LEU 2380.0062
ASN 2390.0047
HIS 2400.0038
LEU 2410.0028
TYR 2420.0036
ALA 2430.0072
LEU 2440.0119
SER 2450.0172
ILE 2460.0122
LYS 2470.0074
ASP 2480.0108
SER 2490.0099
VAL 2500.0080
MET 2510.0057
VAL 2520.0067
LEU 2530.0055
SER 2540.0057
ALA 2550.0048
THR 2560.0046
HIS 2570.0059
ARG 2580.0079
TYR 2590.0136
LYS 2600.0151
LYS 2610.0114
LYS 2620.0136
TYR 2630.0063
VAL 2640.0060
THR 2650.0056
THR 2660.0066
LEU 2670.0072
LEU 2680.0059
TYR 2690.0056
LYS 2700.0020
PRO 2710.0069
PRO 5280.0058
GLY 5290.0035
SER 5300.0072
HIS 5310.0049
THR 5320.0043
ILE 5330.0046
GLU 5340.0035
PHE 5350.0026
PHE 5360.0028
GLU 5370.0032
MET 5380.0030
CYS 5390.0025
ALA 5400.0045
ASN 5410.0045
LEU 5420.0046
ILE 5430.0043
LYS 5440.0069
ILE 5450.0042
LEU 5460.0023
ALA 5470.0097
GLN 5480.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.