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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1257
ARG 100.0085
VAL 110.0099
LYS 120.0090
ILE 130.0102
GLY 140.0128
HIS 150.0102
TYR 160.0063
ILE 170.0046
LEU 180.0069
GLY 190.0069
ASP 200.0093
THR 210.0068
LEU 220.0083
GLY 230.0084
VAL 240.0097
GLY 250.0080
THR 260.0087
PHE 270.0055
GLY 280.0039
LYS 290.0032
VAL 300.0042
LYS 310.0042
VAL 320.0055
GLY 330.0059
LYS 340.0071
HIS 350.0061
GLU 360.0043
LEU 370.0098
THR 380.0070
GLY 390.0094
HIS 400.0093
LYS 410.0069
VAL 420.0036
ALA 430.0028
VAL 440.0026
LYS 450.0027
ILE 460.0038
LEU 470.0042
ASN 480.0045
ARG 490.0055
GLN 500.0052
LYS 510.0047
ILE 520.0020
ARG 530.0061
SER 540.0071
LEU 550.0022
ASP 560.0006
VAL 570.0020
VAL 580.0039
GLY 590.0046
LYS 600.0057
ILE 610.0075
ARG 620.0069
ARG 630.0034
GLU 640.0046
ILE 650.0084
GLN 660.0081
ASN 670.0046
LEU 680.0071
LYS 690.0135
LEU 700.0203
PHE 710.0110
ARG 720.0122
HIS 730.0041
PRO 740.0034
HIS 750.0052
ILE 760.0055
ILE 770.0092
LYS 780.0101
LEU 790.0125
TYR 800.0096
GLN 810.0080
VAL 820.0058
ILE 830.0026
SER 840.0023
THR 850.0055
PRO 860.0093
SER 870.0062
ASP 880.0036
ILE 890.0026
PHE 900.0022
MET 910.0055
VAL 920.0057
MET 930.0075
GLU 940.0072
TYR 950.0054
VAL 960.0059
SER 970.0072
GLY 980.0071
GLY 990.0049
GLU 1000.0049
LEU 1010.0058
PHE 1020.0054
ASP 1030.0059
TYR 1040.0055
ILE 1050.0063
CYS 1060.0077
LYS 1070.0111
ASN 1080.0110
GLY 1090.0099
ARG 1100.0086
LEU 1110.0061
ASP 1120.0082
GLU 1130.0038
LYS 1140.0047
GLU 1150.0033
SER 1160.0022
ARG 1170.0023
ARG 1180.0059
LEU 1190.0039
PHE 1200.0027
GLN 1210.0085
GLN 1220.0074
ILE 1230.0070
LEU 1240.0090
SER 1250.0092
GLY 1260.0088
VAL 1270.0101
ASP 1280.0125
TYR 1290.0098
CYS 1300.0077
HIS 1310.0119
ARG 1320.0134
HIS 1330.0108
MET 1340.0097
VAL 1350.0067
VAL 1360.0072
HIS 1370.0067
ARG 1380.0094
ASP 1390.0056
LEU 1400.0030
LYS 1410.0021
PRO 1420.0058
GLU 1430.0043
ASN 1440.0051
VAL 1450.0068
LEU 1460.0069
LEU 1470.0070
ASP 1480.0078
ALA 1490.0092
HIS 1500.0111
MET 1510.0066
ASN 1520.0073
ALA 1530.0074
LYS 1540.0077
ILE 1550.0076
ALA 1560.0091
ASP 1570.0073
PHE 1580.0065
GLY 1590.0086
LEU 1600.0093
SER 1610.0072
ASN 1620.0075
MET 1630.0061
MET 1640.0069
SER 1650.0052
ASP 1660.0090
GLY 1670.0098
GLU 1680.0050
PHE 1690.0079
LEU 1700.0091
ARG 1710.0130
SER 1730.0134
CYS 1740.0118
GLY 1750.0083
SER 1760.0034
PRO 1770.0048
ASN 1780.0096
TYR 1790.0056
ALA 1800.0048
ALA 1810.0058
PRO 1820.0093
GLU 1830.0110
VAL 1840.0077
ILE 1850.0074
SER 1860.0156
GLY 1870.0185
ARG 1880.0179
LEU 1890.0126
TYR 1900.0114
ALA 1910.0103
GLY 1920.0089
PRO 1930.0081
GLU 1940.0061
VAL 1950.0061
ASP 1960.0061
ILE 1970.0055
TRP 1980.0057
SER 1990.0051
SER 2000.0076
GLY 2010.0085
VAL 2020.0083
ILE 2030.0086
LEU 2040.0094
TYR 2050.0098
ALA 2060.0101
LEU 2070.0085
LEU 2080.0100
CYS 2090.0117
GLY 2100.0123
THR 2110.0135
LEU 2120.0157
PRO 2130.0139
PHE 2140.0133
ASP 2150.0217
ASP 2160.0187
ASP 2170.0238
HIS 2180.0188
VAL 2190.0138
PRO 2200.0086
THR 2210.0100
LEU 2220.0132
PHE 2230.0102
LYS 2240.0089
LYS 2250.0114
ILE 2260.0120
CYS 2270.0100
ASP 2280.0089
GLY 2290.0076
ILE 2300.0165
PHE 2310.0076
TYR 2320.0207
THR 2330.0058
PRO 2340.0170
GLN 2350.0244
TYR 2360.0183
LEU 2370.0148
ASN 2380.0163
PRO 2390.0156
SER 2400.0121
VAL 2410.0113
ILE 2420.0130
SER 2430.0114
LEU 2440.0094
LEU 2450.0095
LYS 2460.0091
HIS 2470.0108
MET 2480.0091
LEU 2490.0073
GLN 2500.0079
VAL 2510.0063
ASP 2520.0076
PRO 2530.0044
MET 2540.0062
LYS 2550.0097
ARG 2560.0084
ALA 2570.0093
THR 2580.0075
ILE 2590.0100
LYS 2600.0081
ASP 2610.0089
ILE 2620.0079
ARG 2630.0071
GLU 2640.0097
HIS 2650.0076
GLU 2660.0120
TRP 2670.0052
PHE 2680.0050
LYS 2690.0140
GLN 2700.0129
ASP 2710.0189
LEU 2720.0174
PRO 2730.0102
LYS 2740.0121
TYR 2750.0101
LEU 2760.0115
PHE 2770.0130
PRO 2780.0214
GLU 2790.0172
ASP 2800.0174
ALA 3210.0057
VAL 3220.0065
ALA 3230.0059
TYR 3240.0144
HIS 3250.0122
LEU 3260.0058
ILE 3270.0087
ILE 3280.0185
ASP 3290.0176
ASN 3300.0048
ARG 3310.0037
ARG 3320.0031
ILE 3330.0130
MET 3340.0083
ASN 3350.0021
GLU 3360.0118
ALA 3370.0092
LYS 3380.0073
ASP 3390.0043
PHE 3400.0055
TYR 3410.0078
LEU 3420.0093
ALA 3430.0050
THR 3440.0061
SER 3450.0152
PRO 3460.0073
PRO 3470.0050
ASP 3480.0077
SER 3490.0081
PHE 3500.0098
LEU 3510.0076
ASP 3520.0049
ASP 3530.0050
HIS 3540.0024
HIS 3550.0033
LEU 3560.0064
THR 3570.0090
ARG 3580.0064
PRO 3590.0053
HIS 3600.0042
PRO 3610.0051
GLU 3620.0036
ARG 3630.0037
VAL 3640.0057
PRO 3650.0097
PHE 3660.0079
LEU 3670.0034
VAL 3680.0047
ALA 3690.0058
GLU 3700.0057
THR 3710.0044
PRO 3720.0083
ARG 3730.0047
ALA 3740.0064
ALA 3940.0321
LYS 3950.0189
TRP 3960.0098
HIS 3970.0119
LEU 3980.0122
GLY 3990.0127
ILE 4000.0091
ARG 4010.0082
SER 4020.0080
GLN 4030.0112
SER 4040.0178
ARG 4050.0243
PRO 4060.0191
ASN 4070.0249
ASP 4080.0227
ILE 4090.0172
MET 4100.0175
ALA 4110.0176
GLU 4120.0149
VAL 4130.0144
CYS 4140.0152
ARG 4150.0171
ALA 4160.0179
ILE 4170.0223
LYS 4180.0237
GLN 4190.0247
LEU 4200.0295
ASP 4210.0241
TYR 4220.0182
GLU 4230.0101
TRP 4240.0126
LYS 4250.0106
VAL 4260.0106
VAL 4270.0185
ASN 4280.0231
PRO 4290.0221
TYR 4300.0096
TYR 4310.0110
LEU 4320.0100
ARG 4330.0110
VAL 4340.0112
ARG 4350.0114
ARG 4360.0075
LYS 4370.0046
ASN 4380.0060
PRO 4390.0256
VAL 4400.0181
THR 4410.0278
SER 4420.0148
THR 4430.0187
PHE 4440.0152
SER 4450.0146
LYS 4460.0154
MET 4470.0182
SER 4480.0124
LEU 4490.0085
GLN 4500.0066
LEU 4510.0086
TYR 4520.0079
GLN 4530.0074
VAL 4540.0073
ASP 4550.0060
SER 4560.0075
ARG 4570.0072
THR 4580.0066
TYR 4590.0098
LEU 4600.0074
LEU 4610.0074
ASP 4620.0058
PHE 4630.0104
ARG 4640.0132
SER 4650.0150
ILE 4660.0464
ASP 4670.0618
ASP 4680.0607
GLU 4690.0945
ILE 4700.1257
LYS 2030.0129
SER 2040.0109
PRO 2050.0091
PRO 2060.0061
ILE 2070.0055
LEU 2080.0071
PRO 2090.0076
PRO 2100.0089
HIS 2110.0092
LEU 2120.0107
LEU 2130.0102
GLN 2140.0087
VAL 2150.0051
ILE 2160.0043
LEU 2170.0076
ASN 2180.0105
LYS 2190.0085
ASP 2200.0124
THR 2210.0073
ASN 2220.0071
ILE 2230.0064
SER 2240.0061
CYS 2250.0046
ASP 2260.0031
PRO 2270.0045
ALA 2280.0056
LEU 2290.0040
LEU 2300.0075
PRO 2310.0071
GLU 2320.0097
PRO 2330.0139
ASN 2340.0125
HIS 2350.0108
VAL 2360.0113
MET 2370.0130
LEU 2380.0120
ASN 2390.0126
HIS 2400.0095
LEU 2410.0065
TYR 2420.0156
ALA 2430.0183
LEU 2440.0197
SER 2450.0601
ILE 2460.0402
LYS 2470.0408
ASP 2480.0422
SER 2490.0148
VAL 2500.0310
MET 2510.0256
VAL 2520.0210
LEU 2530.0180
SER 2540.0094
ALA 2550.0098
THR 2560.0094
HIS 2570.0077
ARG 2580.0044
TYR 2590.0006
LYS 2600.0103
LYS 2610.0128
LYS 2620.0036
TYR 2630.0072
VAL 2640.0067
THR 2650.0076
THR 2660.0071
LEU 2670.0092
LEU 2680.0126
TYR 2690.0301
LYS 2700.0295
PRO 2710.0315
PRO 5280.0225
GLY 5290.0165
SER 5300.0173
HIS 5310.0133
THR 5320.0141
ILE 5330.0108
GLU 5340.0065
PHE 5350.0067
PHE 5360.0074
GLU 5370.0112
MET 5380.0114
CYS 5390.0121
ALA 5400.0209
ASN 5410.0200
LEU 5420.0180
ILE 5430.0174
LYS 5440.0187
ILE 5450.0162
LEU 5460.0127
ALA 5470.0360
GLN 5480.0461

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.