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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0589
ARG 100.0136
VAL 110.0133
LYS 120.0104
ILE 130.0120
GLY 140.0172
HIS 150.0136
TYR 160.0072
ILE 170.0050
LEU 180.0089
GLY 190.0104
ASP 200.0082
THR 210.0070
LEU 220.0069
GLY 230.0080
VAL 240.0122
GLY 250.0068
THR 260.0065
PHE 270.0071
GLY 280.0076
LYS 290.0074
VAL 300.0068
LYS 310.0042
VAL 320.0055
GLY 330.0079
LYS 340.0104
HIS 350.0064
GLU 360.0074
LEU 370.0134
THR 380.0112
GLY 390.0180
HIS 400.0159
LYS 410.0118
VAL 420.0058
ALA 430.0052
VAL 440.0047
LYS 450.0048
ILE 460.0050
LEU 470.0057
ASN 480.0043
ARG 490.0056
GLN 500.0079
LYS 510.0096
ILE 520.0092
ARG 530.0057
SER 540.0113
LEU 550.0102
ASP 560.0158
VAL 570.0165
VAL 580.0139
GLY 590.0069
LYS 600.0071
ILE 610.0092
ARG 620.0119
ARG 630.0125
GLU 640.0050
ILE 650.0057
GLN 660.0129
ASN 670.0118
LEU 680.0038
LYS 690.0119
LEU 700.0225
PHE 710.0116
ARG 720.0125
HIS 730.0067
PRO 740.0064
HIS 750.0054
ILE 760.0050
ILE 770.0073
LYS 780.0087
LEU 790.0105
TYR 800.0091
GLN 810.0087
VAL 820.0067
ILE 830.0047
SER 840.0036
THR 850.0059
PRO 860.0083
SER 870.0050
ASP 880.0024
ILE 890.0039
PHE 900.0040
MET 910.0072
VAL 920.0074
MET 930.0083
GLU 940.0081
TYR 950.0061
VAL 960.0071
SER 970.0126
GLY 980.0147
GLY 990.0143
GLU 1000.0091
LEU 1010.0090
PHE 1020.0082
ASP 1030.0085
TYR 1040.0103
ILE 1050.0100
CYS 1060.0081
LYS 1070.0118
ASN 1080.0132
GLY 1090.0106
ARG 1100.0103
LEU 1110.0113
ASP 1120.0118
GLU 1130.0103
LYS 1140.0094
GLU 1150.0082
SER 1160.0089
ARG 1170.0069
ARG 1180.0048
LEU 1190.0075
PHE 1200.0064
GLN 1210.0027
GLN 1220.0032
ILE 1230.0035
LEU 1240.0041
SER 1250.0021
GLY 1260.0044
VAL 1270.0050
ASP 1280.0058
TYR 1290.0063
CYS 1300.0072
HIS 1310.0101
ARG 1320.0105
HIS 1330.0116
MET 1340.0138
VAL 1350.0128
VAL 1360.0143
HIS 1370.0137
ARG 1380.0162
ASP 1390.0114
LEU 1400.0085
LYS 1410.0086
PRO 1420.0039
GLU 1430.0046
ASN 1440.0057
VAL 1450.0067
LEU 1460.0081
LEU 1470.0088
ASP 1480.0121
ALA 1490.0163
HIS 1500.0141
MET 1510.0098
ASN 1520.0082
ALA 1530.0073
LYS 1540.0049
ILE 1550.0044
ALA 1560.0047
ASP 1570.0092
PHE 1580.0094
GLY 1590.0120
LEU 1600.0193
SER 1610.0179
ASN 1620.0192
MET 1630.0182
MET 1640.0124
SER 1650.0131
ASP 1660.0110
GLY 1670.0103
GLU 1680.0085
PHE 1690.0166
LEU 1700.0155
ARG 1710.0121
SER 1730.0188
CYS 1740.0220
GLY 1750.0188
SER 1760.0160
PRO 1770.0159
ASN 1780.0130
TYR 1790.0093
ALA 1800.0092
ALA 1810.0077
PRO 1820.0065
GLU 1830.0088
VAL 1840.0117
ILE 1850.0107
SER 1860.0098
GLY 1870.0129
ARG 1880.0104
LEU 1890.0134
TYR 1900.0142
ALA 1910.0134
GLY 1920.0113
PRO 1930.0073
GLU 1940.0069
VAL 1950.0076
ASP 1960.0086
ILE 1970.0048
TRP 1980.0052
SER 1990.0064
SER 2000.0052
GLY 2010.0050
VAL 2020.0055
ILE 2030.0053
LEU 2040.0070
TYR 2050.0055
ALA 2060.0056
LEU 2070.0075
LEU 2080.0087
CYS 2090.0076
GLY 2100.0061
THR 2110.0023
LEU 2120.0043
PRO 2130.0037
PHE 2140.0039
ASP 2150.0116
ASP 2160.0038
ASP 2170.0147
HIS 2180.0065
VAL 2190.0069
PRO 2200.0103
THR 2210.0052
LEU 2220.0071
PHE 2230.0088
LYS 2240.0064
LYS 2250.0061
ILE 2260.0068
CYS 2270.0060
ASP 2280.0040
GLY 2290.0046
ILE 2300.0176
PHE 2310.0163
TYR 2320.0360
THR 2330.0084
PRO 2340.0106
GLN 2350.0089
TYR 2360.0120
LEU 2370.0133
ASN 2380.0168
PRO 2390.0187
SER 2400.0145
VAL 2410.0142
ILE 2420.0156
SER 2430.0147
LEU 2440.0135
LEU 2450.0099
LYS 2460.0093
HIS 2470.0098
MET 2480.0071
LEU 2490.0070
GLN 2500.0068
VAL 2510.0072
ASP 2520.0127
PRO 2530.0126
MET 2540.0191
LYS 2550.0151
ARG 2560.0066
ALA 2570.0098
THR 2580.0102
ILE 2590.0098
LYS 2600.0162
ASP 2610.0149
ILE 2620.0119
ARG 2630.0095
GLU 2640.0148
HIS 2650.0134
GLU 2660.0113
TRP 2670.0060
PHE 2680.0057
LYS 2690.0088
GLN 2700.0080
ASP 2710.0127
LEU 2720.0063
PRO 2730.0032
LYS 2740.0055
TYR 2750.0033
LEU 2760.0030
PHE 2770.0028
PRO 2780.0091
GLU 2790.0045
ASP 2800.0086
ALA 3210.0065
VAL 3220.0071
ALA 3230.0065
TYR 3240.0058
HIS 3250.0113
LEU 3260.0091
ILE 3270.0020
ILE 3280.0099
ASP 3290.0139
ASN 3300.0095
ARG 3310.0073
ARG 3320.0077
ILE 3330.0103
MET 3340.0086
ASN 3350.0052
GLU 3360.0066
ALA 3370.0048
LYS 3380.0045
ASP 3390.0046
PHE 3400.0043
TYR 3410.0073
LEU 3420.0055
ALA 3430.0037
THR 3440.0058
SER 3450.0032
PRO 3460.0027
PRO 3470.0029
ASP 3480.0036
SER 3490.0051
PHE 3500.0033
LEU 3510.0050
ASP 3520.0042
ASP 3530.0063
HIS 3540.0054
HIS 3550.0044
LEU 3560.0052
THR 3570.0055
ARG 3580.0015
PRO 3590.0062
HIS 3600.0052
PRO 3610.0054
GLU 3620.0038
ARG 3630.0029
VAL 3640.0033
PRO 3650.0033
PHE 3660.0019
LEU 3670.0021
VAL 3680.0016
ALA 3690.0032
GLU 3700.0019
THR 3710.0039
PRO 3720.0078
ARG 3730.0013
ALA 3740.0017
ALA 3940.0326
LYS 3950.0220
TRP 3960.0099
HIS 3970.0037
LEU 3980.0073
GLY 3990.0102
ILE 4000.0136
ARG 4010.0093
SER 4020.0128
GLN 4030.0302
SER 4040.0080
ARG 4050.0382
PRO 4060.0401
ASN 4070.0367
ASP 4080.0316
ILE 4090.0317
MET 4100.0282
ALA 4110.0226
GLU 4120.0200
VAL 4130.0221
CYS 4140.0123
ARG 4150.0176
ALA 4160.0166
ILE 4170.0066
LYS 4180.0073
GLN 4190.0132
LEU 4200.0080
ASP 4210.0115
TYR 4220.0153
GLU 4230.0230
TRP 4240.0178
LYS 4250.0226
VAL 4260.0266
VAL 4270.0309
ASN 4280.0283
PRO 4290.0241
TYR 4300.0185
TYR 4310.0171
LEU 4320.0171
ARG 4330.0149
VAL 4340.0132
ARG 4350.0163
ARG 4360.0204
LYS 4370.0196
ASN 4380.0209
PRO 4390.0561
VAL 4400.0540
THR 4410.0439
SER 4420.0238
THR 4430.0309
PHE 4440.0313
SER 4450.0125
LYS 4460.0096
MET 4470.0059
SER 4480.0112
LEU 4490.0134
GLN 4500.0162
LEU 4510.0224
TYR 4520.0130
GLN 4530.0095
VAL 4540.0131
ASP 4550.0356
SER 4560.0589
ARG 4570.0345
THR 4580.0143
TYR 4590.0184
LEU 4600.0136
LEU 4610.0156
ASP 4620.0147
PHE 4630.0107
ARG 4640.0100
SER 4650.0079
ILE 4660.0161
ASP 4670.0294
ASP 4680.0251
GLU 4690.0368
ILE 4700.0421
LYS 2030.0288
SER 2040.0191
PRO 2050.0166
PRO 2060.0124
ILE 2070.0104
LEU 2080.0091
PRO 2090.0164
PRO 2100.0186
HIS 2110.0193
LEU 2120.0146
LEU 2130.0171
GLN 2140.0174
VAL 2150.0054
ILE 2160.0032
LEU 2170.0035
ASN 2180.0074
LYS 2190.0046
ASP 2200.0037
THR 2210.0025
ASN 2220.0036
ILE 2230.0036
SER 2240.0044
CYS 2250.0046
ASP 2260.0057
PRO 2270.0053
ALA 2280.0067
LEU 2290.0058
LEU 2300.0028
PRO 2310.0019
GLU 2320.0035
PRO 2330.0101
ASN 2340.0099
HIS 2350.0094
VAL 2360.0124
MET 2370.0110
LEU 2380.0101
ASN 2390.0090
HIS 2400.0090
LEU 2410.0080
TYR 2420.0054
ALA 2430.0054
LEU 2440.0116
SER 2450.0244
ILE 2460.0238
LYS 2470.0254
ASP 2480.0381
SER 2490.0369
VAL 2500.0153
MET 2510.0096
VAL 2520.0121
LEU 2530.0127
SER 2540.0067
ALA 2550.0053
THR 2560.0060
HIS 2570.0072
ARG 2580.0048
TYR 2590.0069
LYS 2600.0100
LYS 2610.0074
LYS 2620.0043
TYR 2630.0041
VAL 2640.0043
THR 2650.0045
THR 2660.0098
LEU 2670.0107
LEU 2680.0128
TYR 2690.0109
LYS 2700.0048
PRO 2710.0147
PRO 5280.0258
GLY 5290.0299
SER 5300.0356
HIS 5310.0146
THR 5320.0099
ILE 5330.0165
GLU 5340.0116
PHE 5350.0094
PHE 5360.0098
GLU 5370.0114
MET 5380.0119
CYS 5390.0113
ALA 5400.0114
ASN 5410.0088
LEU 5420.0085
ILE 5430.0110
LYS 5440.0161
ILE 5450.0093
LEU 5460.0106
ALA 5470.0283
GLN 5480.0449

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.