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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1224
ARG 100.0206
VAL 110.0158
LYS 120.0074
ILE 130.0081
GLY 140.0127
HIS 150.0102
TYR 160.0034
ILE 170.0019
LEU 180.0062
GLY 190.0150
ASP 200.0145
THR 210.0134
LEU 220.0084
GLY 230.0099
VAL 240.0145
GLY 250.0090
THR 260.0091
PHE 270.0060
GLY 280.0087
LYS 290.0085
VAL 300.0067
LYS 310.0051
VAL 320.0033
GLY 330.0033
LYS 340.0039
HIS 350.0038
GLU 360.0061
LEU 370.0118
THR 380.0185
GLY 390.0149
HIS 400.0074
LYS 410.0050
VAL 420.0029
ALA 430.0003
VAL 440.0014
LYS 450.0010
ILE 460.0015
LEU 470.0016
ASN 480.0023
ARG 490.0035
GLN 500.0084
LYS 510.0066
ILE 520.0027
ARG 530.0084
SER 540.0116
LEU 550.0096
ASP 560.0080
VAL 570.0060
VAL 580.0112
GLY 590.0159
LYS 600.0089
ILE 610.0151
ARG 620.0206
ARG 630.0143
GLU 640.0108
ILE 650.0129
GLN 660.0123
ASN 670.0075
LEU 680.0066
LYS 690.0093
LEU 700.0090
PHE 710.0046
ARG 720.0032
HIS 730.0042
PRO 740.0044
HIS 750.0043
ILE 760.0025
ILE 770.0023
LYS 780.0022
LEU 790.0048
TYR 800.0065
GLN 810.0085
VAL 820.0088
ILE 830.0098
SER 840.0102
THR 850.0115
PRO 860.0120
SER 870.0048
ASP 880.0029
ILE 890.0038
PHE 900.0035
MET 910.0044
VAL 920.0042
MET 930.0035
GLU 940.0031
TYR 950.0016
VAL 960.0016
SER 970.0020
GLY 980.0028
GLY 990.0032
GLU 1000.0023
LEU 1010.0015
PHE 1020.0016
ASP 1030.0029
TYR 1040.0020
ILE 1050.0013
CYS 1060.0044
LYS 1070.0066
ASN 1080.0064
GLY 1090.0031
ARG 1100.0025
LEU 1110.0027
ASP 1120.0049
GLU 1130.0033
LYS 1140.0017
GLU 1150.0026
SER 1160.0022
ARG 1170.0012
ARG 1180.0031
LEU 1190.0032
PHE 1200.0032
GLN 1210.0037
GLN 1220.0044
ILE 1230.0050
LEU 1240.0052
SER 1250.0058
GLY 1260.0048
VAL 1270.0047
ASP 1280.0053
TYR 1290.0056
CYS 1300.0052
HIS 1310.0044
ARG 1320.0055
HIS 1330.0090
MET 1340.0075
VAL 1350.0065
VAL 1360.0059
HIS 1370.0042
ARG 1380.0039
ASP 1390.0031
LEU 1400.0012
LYS 1410.0025
PRO 1420.0025
GLU 1430.0025
ASN 1440.0021
VAL 1450.0030
LEU 1460.0028
LEU 1470.0026
ASP 1480.0028
ALA 1490.0079
HIS 1500.0070
MET 1510.0041
ASN 1520.0033
ALA 1530.0040
LYS 1540.0034
ILE 1550.0026
ALA 1560.0024
ASP 1570.0051
PHE 1580.0051
GLY 1590.0064
LEU 1600.0058
SER 1610.0056
ASN 1620.0070
MET 1630.0092
MET 1640.0067
SER 1650.0059
ASP 1660.0056
GLY 1670.0060
GLU 1680.0049
PHE 1690.0069
LEU 1700.0071
ARG 1710.0070
SER 1730.0078
CYS 1740.0079
GLY 1750.0049
SER 1760.0068
PRO 1770.0083
ASN 1780.0073
TYR 1790.0034
ALA 1800.0031
ALA 1810.0020
PRO 1820.0023
GLU 1830.0038
VAL 1840.0046
ILE 1850.0040
SER 1860.0052
GLY 1870.0080
ARG 1880.0081
LEU 1890.0078
TYR 1900.0076
ALA 1910.0072
GLY 1920.0060
PRO 1930.0051
GLU 1940.0043
VAL 1950.0030
ASP 1960.0021
ILE 1970.0023
TRP 1980.0011
SER 1990.0016
SER 2000.0017
GLY 2010.0021
VAL 2020.0029
ILE 2030.0025
LEU 2040.0021
TYR 2050.0026
ALA 2060.0020
LEU 2070.0018
LEU 2080.0025
CYS 2090.0031
GLY 2100.0034
THR 2110.0037
LEU 2120.0042
PRO 2130.0043
PHE 2140.0043
ASP 2150.0077
ASP 2160.0021
ASP 2170.0029
HIS 2180.0070
VAL 2190.0087
PRO 2200.0124
THR 2210.0039
LEU 2220.0050
PHE 2230.0080
LYS 2240.0052
LYS 2250.0048
ILE 2260.0060
CYS 2270.0044
ASP 2280.0044
GLY 2290.0044
ILE 2300.0015
PHE 2310.0045
TYR 2320.0109
THR 2330.0066
PRO 2340.0111
GLN 2350.0198
TYR 2360.0130
LEU 2370.0077
ASN 2380.0073
PRO 2390.0057
SER 2400.0048
VAL 2410.0035
ILE 2420.0038
SER 2430.0026
LEU 2440.0019
LEU 2450.0025
LYS 2460.0023
HIS 2470.0022
MET 2480.0025
LEU 2490.0020
GLN 2500.0017
VAL 2510.0023
ASP 2520.0021
PRO 2530.0034
MET 2540.0044
LYS 2550.0031
ARG 2560.0031
ALA 2570.0030
THR 2580.0035
ILE 2590.0047
LYS 2600.0036
ASP 2610.0023
ILE 2620.0027
ARG 2630.0023
GLU 2640.0014
HIS 2650.0008
GLU 2660.0017
TRP 2670.0008
PHE 2680.0008
LYS 2690.0014
GLN 2700.0010
ASP 2710.0010
LEU 2720.0011
PRO 2730.0038
LYS 2740.0077
TYR 2750.0027
LEU 2760.0033
PHE 2770.0065
PRO 2780.0140
GLU 2790.0142
ASP 2800.0120
ALA 3210.0082
VAL 3220.0076
ALA 3230.0173
TYR 3240.0108
HIS 3250.0081
LEU 3260.0076
ILE 3270.0149
ILE 3280.0121
ASP 3290.0017
ASN 3300.0100
ARG 3310.0108
ARG 3320.0065
ILE 3330.0081
MET 3340.0090
ASN 3350.0082
GLU 3360.0101
ALA 3370.0049
LYS 3380.0092
ASP 3390.0151
PHE 3400.0102
TYR 3410.0060
LEU 3420.0113
ALA 3430.0122
THR 3440.0129
SER 3450.0170
PRO 3460.0053
PRO 3470.0178
ASP 3480.0212
SER 3490.0307
PHE 3500.0402
LEU 3510.0391
ASP 3520.0437
ASP 3530.0166
HIS 3540.0235
HIS 3550.0241
LEU 3560.0617
THR 3570.0614
ARG 3580.0509
PRO 3590.0459
HIS 3600.0465
PRO 3610.0456
GLU 3620.0123
ARG 3630.0334
VAL 3640.0523
PRO 3650.0703
PHE 3660.0436
LEU 3670.0268
VAL 3680.0387
ALA 3690.0344
GLU 3700.0260
THR 3710.0435
PRO 3720.1224
ARG 3730.0319
ALA 3740.0514
ALA 3940.0060
LYS 3950.0038
TRP 3960.0032
HIS 3970.0025
LEU 3980.0020
GLY 3990.0039
ILE 4000.0062
ARG 4010.0043
SER 4020.0022
GLN 4030.0066
SER 4040.0070
ARG 4050.0070
PRO 4060.0050
ASN 4070.0076
ASP 4080.0102
ILE 4090.0070
MET 4100.0064
ALA 4110.0086
GLU 4120.0068
VAL 4130.0058
CYS 4140.0056
ARG 4150.0059
ALA 4160.0069
ILE 4170.0055
LYS 4180.0061
GLN 4190.0080
LEU 4200.0086
ASP 4210.0081
TYR 4220.0075
GLU 4230.0089
TRP 4240.0023
LYS 4250.0036
VAL 4260.0058
VAL 4270.0122
ASN 4280.0106
PRO 4290.0086
TYR 4300.0025
TYR 4310.0049
LEU 4320.0049
ARG 4330.0072
VAL 4340.0062
ARG 4350.0065
ARG 4360.0108
LYS 4370.0135
ASN 4380.0053
PRO 4390.0334
VAL 4400.0194
THR 4410.0290
SER 4420.0189
THR 4430.0187
PHE 4440.0150
SER 4450.0032
LYS 4460.0038
MET 4470.0061
SER 4480.0080
LEU 4490.0064
GLN 4500.0060
LEU 4510.0035
TYR 4520.0031
GLN 4530.0025
VAL 4540.0131
ASP 4550.0172
SER 4560.0216
ARG 4570.0132
THR 4580.0077
TYR 4590.0042
LEU 4600.0043
LEU 4610.0048
ASP 4620.0051
PHE 4630.0069
ARG 4640.0070
SER 4650.0065
ILE 4660.0150
ASP 4670.0186
ASP 4680.0180
GLU 4690.0321
ILE 4700.0328
LYS 2030.0107
SER 2040.0065
PRO 2050.0039
PRO 2060.0057
ILE 2070.0055
LEU 2080.0051
PRO 2090.0059
PRO 2100.0069
HIS 2110.0057
LEU 2120.0035
LEU 2130.0050
GLN 2140.0056
VAL 2150.0008
ILE 2160.0032
LEU 2170.0035
ASN 2180.0087
LYS 2190.0089
ASP 2200.0142
THR 2210.0164
ASN 2220.0240
ILE 2230.0334
SER 2240.0441
CYS 2250.0256
ASP 2260.0266
PRO 2270.0183
ALA 2280.0283
LEU 2290.0178
LEU 2300.0141
PRO 2310.0143
GLU 2320.0138
PRO 2330.0048
ASN 2340.0048
HIS 2350.0048
VAL 2360.0042
MET 2370.0049
LEU 2380.0055
ASN 2390.0060
HIS 2400.0049
LEU 2410.0048
TYR 2420.0041
ALA 2430.0058
LEU 2440.0065
SER 2450.0123
ILE 2460.0115
LYS 2470.0150
ASP 2480.0191
SER 2490.0183
VAL 2500.0075
MET 2510.0046
VAL 2520.0059
LEU 2530.0079
SER 2540.0061
ALA 2550.0053
THR 2560.0059
HIS 2570.0057
ARG 2580.0043
TYR 2590.0044
LYS 2600.0070
LYS 2610.0053
LYS 2620.0025
TYR 2630.0043
VAL 2640.0051
THR 2650.0057
THR 2660.0065
LEU 2670.0069
LEU 2680.0084
TYR 2690.0061
LYS 2700.0025
PRO 2710.0076
PRO 5280.0291
GLY 5290.0149
SER 5300.0188
HIS 5310.0117
THR 5320.0091
ILE 5330.0129
GLU 5340.0106
PHE 5350.0054
PHE 5360.0097
GLU 5370.0091
MET 5380.0061
CYS 5390.0075
ALA 5400.0055
ASN 5410.0067
LEU 5420.0069
ILE 5430.0057
LYS 5440.0067
ILE 5450.0047
LEU 5460.0082
ALA 5470.0086
GLN 5480.0146

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.