CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0809
ARG 100.0191
VAL 110.0113
LYS 120.0025
ILE 130.0017
GLY 140.0071
HIS 150.0082
TYR 160.0061
ILE 170.0057
LEU 180.0072
GLY 190.0090
ASP 200.0140
THR 210.0166
LEU 220.0169
GLY 230.0177
VAL 240.0185
GLY 250.0113
THR 260.0115
PHE 270.0111
GLY 280.0124
LYS 290.0128
VAL 300.0116
LYS 310.0089
VAL 320.0060
GLY 330.0036
LYS 340.0066
HIS 350.0068
GLU 360.0100
LEU 370.0143
THR 380.0194
GLY 390.0164
HIS 400.0108
LYS 410.0070
VAL 420.0085
ALA 430.0039
VAL 440.0049
LYS 450.0039
ILE 460.0041
LEU 470.0038
ASN 480.0043
ARG 490.0047
GLN 500.0078
LYS 510.0102
ILE 520.0106
ARG 530.0090
SER 540.0107
LEU 550.0092
ASP 560.0077
VAL 570.0140
VAL 580.0172
GLY 590.0188
LYS 600.0170
ILE 610.0178
ARG 620.0245
ARG 630.0167
GLU 640.0099
ILE 650.0129
GLN 660.0122
ASN 670.0054
LEU 680.0050
LYS 690.0074
LEU 700.0059
PHE 710.0038
ARG 720.0088
HIS 730.0057
PRO 740.0061
HIS 750.0063
ILE 760.0040
ILE 770.0038
LYS 780.0069
LEU 790.0117
TYR 800.0127
GLN 810.0143
VAL 820.0109
ILE 830.0076
SER 840.0060
THR 850.0064
PRO 860.0053
SER 870.0052
ASP 880.0041
ILE 890.0024
PHE 900.0022
MET 910.0074
VAL 920.0074
MET 930.0077
GLU 940.0083
TYR 950.0029
VAL 960.0067
SER 970.0106
GLY 980.0106
GLY 990.0103
GLU 1000.0057
LEU 1010.0047
PHE 1020.0046
ASP 1030.0042
TYR 1040.0037
ILE 1050.0041
CYS 1060.0047
LYS 1070.0026
ASN 1080.0020
GLY 1090.0042
ARG 1100.0038
LEU 1110.0031
ASP 1120.0059
GLU 1130.0066
LYS 1140.0067
GLU 1150.0040
SER 1160.0040
ARG 1170.0037
ARG 1180.0035
LEU 1190.0049
PHE 1200.0043
GLN 1210.0041
GLN 1220.0049
ILE 1230.0063
LEU 1240.0066
SER 1250.0056
GLY 1260.0067
VAL 1270.0071
ASP 1280.0078
TYR 1290.0074
CYS 1300.0071
HIS 1310.0068
ARG 1320.0081
HIS 1330.0082
MET 1340.0065
VAL 1350.0058
VAL 1360.0038
HIS 1370.0029
ARG 1380.0021
ASP 1390.0015
LEU 1400.0015
LYS 1410.0021
PRO 1420.0023
GLU 1430.0026
ASN 1440.0028
VAL 1450.0058
LEU 1460.0066
LEU 1470.0067
ASP 1480.0134
ALA 1490.0129
HIS 1500.0129
MET 1510.0087
ASN 1520.0083
ALA 1530.0084
LYS 1540.0052
ILE 1550.0050
ALA 1560.0042
ASP 1570.0025
PHE 1580.0023
GLY 1590.0032
LEU 1600.0013
SER 1610.0018
ASN 1620.0030
MET 1630.0079
MET 1640.0062
SER 1650.0085
ASP 1660.0120
GLY 1670.0123
GLU 1680.0116
PHE 1690.0061
LEU 1700.0047
ARG 1710.0049
SER 1730.0073
CYS 1740.0071
GLY 1750.0067
SER 1760.0106
PRO 1770.0132
ASN 1780.0144
TYR 1790.0083
ALA 1800.0083
ALA 1810.0082
PRO 1820.0097
GLU 1830.0084
VAL 1840.0074
ILE 1850.0113
SER 1860.0126
GLY 1870.0115
ARG 1880.0073
LEU 1890.0068
TYR 1900.0062
ALA 1910.0068
GLY 1920.0045
PRO 1930.0032
GLU 1940.0016
VAL 1950.0022
ASP 1960.0024
ILE 1970.0028
TRP 1980.0048
SER 1990.0056
SER 2000.0022
GLY 2010.0035
VAL 2020.0052
ILE 2030.0034
LEU 2040.0017
TYR 2050.0033
ALA 2060.0037
LEU 2070.0022
LEU 2080.0021
CYS 2090.0030
GLY 2100.0072
THR 2110.0095
LEU 2120.0137
PRO 2130.0131
PHE 2140.0119
ASP 2150.0202
ASP 2160.0130
ASP 2170.0184
HIS 2180.0167
VAL 2190.0015
PRO 2200.0162
THR 2210.0032
LEU 2220.0089
PHE 2230.0154
LYS 2240.0120
LYS 2250.0131
ILE 2260.0157
CYS 2270.0128
ASP 2280.0127
GLY 2290.0107
ILE 2300.0071
PHE 2310.0064
TYR 2320.0080
THR 2330.0096
PRO 2340.0177
GLN 2350.0253
TYR 2360.0162
LEU 2370.0095
ASN 2380.0098
PRO 2390.0070
SER 2400.0028
VAL 2410.0036
ILE 2420.0059
SER 2430.0063
LEU 2440.0074
LEU 2450.0067
LYS 2460.0073
HIS 2470.0075
MET 2480.0065
LEU 2490.0067
GLN 2500.0059
VAL 2510.0086
ASP 2520.0063
PRO 2530.0029
MET 2540.0057
LYS 2550.0026
ARG 2560.0057
ALA 2570.0083
THR 2580.0087
ILE 2590.0093
LYS 2600.0115
ASP 2610.0118
ILE 2620.0094
ARG 2630.0083
GLU 2640.0114
HIS 2650.0102
GLU 2660.0062
TRP 2670.0041
PHE 2680.0026
LYS 2690.0044
GLN 2700.0026
ASP 2710.0073
LEU 2720.0037
PRO 2730.0028
LYS 2740.0065
TYR 2750.0029
LEU 2760.0008
PHE 2770.0044
PRO 2780.0239
GLU 2790.0076
ASP 2800.0091
ALA 3210.0139
VAL 3220.0127
ALA 3230.0225
TYR 3240.0104
HIS 3250.0074
LEU 3260.0087
ILE 3270.0186
ILE 3280.0115
ASP 3290.0048
ASN 3300.0160
ARG 3310.0092
ARG 3320.0077
ILE 3330.0111
MET 3340.0088
ASN 3350.0115
GLU 3360.0136
ALA 3370.0109
LYS 3380.0137
ASP 3390.0155
PHE 3400.0115
TYR 3410.0088
LEU 3420.0080
ALA 3430.0077
THR 3440.0075
SER 3450.0091
PRO 3460.0052
PRO 3470.0091
ASP 3480.0070
SER 3490.0060
PHE 3500.0114
LEU 3510.0078
ASP 3520.0084
ASP 3530.0036
HIS 3540.0163
HIS 3550.0067
LEU 3560.0435
THR 3570.0171
ARG 3580.0125
PRO 3590.0188
HIS 3600.0184
PRO 3610.0201
GLU 3620.0061
ARG 3630.0151
VAL 3640.0272
PRO 3650.0396
PHE 3660.0278
LEU 3670.0127
VAL 3680.0207
ALA 3690.0189
GLU 3700.0137
THR 3710.0200
PRO 3720.0577
ARG 3730.0185
ALA 3740.0257
ALA 3940.0236
LYS 3950.0166
TRP 3960.0055
HIS 3970.0057
LEU 3980.0074
GLY 3990.0094
ILE 4000.0141
ARG 4010.0112
SER 4020.0102
GLN 4030.0128
SER 4040.0079
ARG 4050.0133
PRO 4060.0127
ASN 4070.0130
ASP 4080.0169
ILE 4090.0151
MET 4100.0133
ALA 4110.0157
GLU 4120.0136
VAL 4130.0107
CYS 4140.0093
ARG 4150.0090
ALA 4160.0101
ILE 4170.0060
LYS 4180.0058
GLN 4190.0089
LEU 4200.0098
ASP 4210.0131
TYR 4220.0124
GLU 4230.0169
TRP 4240.0070
LYS 4250.0081
VAL 4260.0078
VAL 4270.0142
ASN 4280.0089
PRO 4290.0071
TYR 4300.0033
TYR 4310.0060
LEU 4320.0069
ARG 4330.0147
VAL 4340.0124
ARG 4350.0102
ARG 4360.0206
LYS 4370.0284
ASN 4380.0107
PRO 4390.0809
VAL 4400.0427
THR 4410.0691
SER 4420.0444
THR 4430.0416
PHE 4440.0295
SER 4450.0087
LYS 4460.0056
MET 4470.0103
SER 4480.0119
LEU 4490.0092
GLN 4500.0089
LEU 4510.0086
TYR 4520.0079
GLN 4530.0064
VAL 4540.0255
ASP 4550.0321
SER 4560.0399
ARG 4570.0252
THR 4580.0143
TYR 4590.0112
LEU 4600.0108
LEU 4610.0101
ASP 4620.0099
PHE 4630.0121
ARG 4640.0117
SER 4650.0120
ILE 4660.0189
ASP 4670.0245
ASP 4680.0255
GLU 4690.0422
ILE 4700.0371
LYS 2030.0154
SER 2040.0120
PRO 2050.0093
PRO 2060.0113
ILE 2070.0112
LEU 2080.0121
PRO 2090.0087
PRO 2100.0124
HIS 2110.0109
LEU 2120.0089
LEU 2130.0137
GLN 2140.0154
VAL 2150.0051
ILE 2160.0083
LEU 2170.0087
ASN 2180.0085
LYS 2190.0097
ASP 2200.0092
THR 2210.0073
ASN 2220.0082
ILE 2230.0111
SER 2240.0125
CYS 2250.0111
ASP 2260.0116
PRO 2270.0085
ALA 2280.0093
LEU 2290.0061
LEU 2300.0085
PRO 2310.0088
GLU 2320.0071
PRO 2330.0079
ASN 2340.0087
HIS 2350.0089
VAL 2360.0098
MET 2370.0109
LEU 2380.0127
ASN 2390.0123
HIS 2400.0107
LEU 2410.0113
TYR 2420.0067
ALA 2430.0068
LEU 2440.0030
SER 2450.0158
ILE 2460.0116
LYS 2470.0210
ASP 2480.0199
SER 2490.0218
VAL 2500.0135
MET 2510.0022
VAL 2520.0051
LEU 2530.0122
SER 2540.0139
ALA 2550.0132
THR 2560.0133
HIS 2570.0135
ARG 2580.0082
TYR 2590.0080
LYS 2600.0178
LYS 2610.0122
LYS 2620.0176
TYR 2630.0094
VAL 2640.0115
THR 2650.0140
THR 2660.0165
LEU 2670.0125
LEU 2680.0133
TYR 2690.0106
LYS 2700.0048
PRO 2710.0155
PRO 5280.0660
GLY 5290.0373
SER 5300.0423
HIS 5310.0228
THR 5320.0215
ILE 5330.0301
GLU 5340.0240
PHE 5350.0155
PHE 5360.0247
GLU 5370.0220
MET 5380.0175
CYS 5390.0190
ALA 5400.0122
ASN 5410.0143
LEU 5420.0139
ILE 5430.0102
LYS 5440.0113
ILE 5450.0080
LEU 5460.0174
ALA 5470.0189
GLN 5480.0313

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.