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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0736
ARG 100.0736
VAL 110.0508
LYS 120.0137
ILE 130.0143
GLY 140.0267
HIS 150.0239
TYR 160.0060
ILE 170.0063
LEU 180.0089
GLY 190.0075
ASP 200.0245
THR 210.0319
LEU 220.0247
GLY 230.0245
VAL 240.0256
GLY 250.0145
THR 260.0167
PHE 270.0139
GLY 280.0220
LYS 290.0224
VAL 300.0184
LYS 310.0140
VAL 320.0073
GLY 330.0015
LYS 340.0114
HIS 350.0064
GLU 360.0248
LEU 370.0313
THR 380.0516
GLY 390.0492
HIS 400.0310
LYS 410.0175
VAL 420.0140
ALA 430.0110
VAL 440.0115
LYS 450.0104
ILE 460.0071
LEU 470.0054
ASN 480.0085
ARG 490.0111
GLN 500.0145
LYS 510.0193
ILE 520.0198
ARG 530.0126
SER 540.0212
LEU 550.0161
ASP 560.0173
VAL 570.0287
VAL 580.0302
GLY 590.0344
LYS 600.0375
ILE 610.0299
ARG 620.0403
ARG 630.0275
GLU 640.0158
ILE 650.0186
GLN 660.0115
ASN 670.0026
LEU 680.0120
LYS 690.0203
LEU 700.0307
PHE 710.0266
ARG 720.0379
HIS 730.0223
PRO 740.0188
HIS 750.0131
ILE 760.0139
ILE 770.0188
LYS 780.0234
LEU 790.0297
TYR 800.0245
GLN 810.0228
VAL 820.0177
ILE 830.0117
SER 840.0093
THR 850.0116
PRO 860.0157
SER 870.0144
ASP 880.0082
ILE 890.0049
PHE 900.0065
MET 910.0158
VAL 920.0169
MET 930.0204
GLU 940.0224
TYR 950.0137
VAL 960.0087
SER 970.0113
GLY 980.0066
GLY 990.0046
GLU 1000.0099
LEU 1010.0079
PHE 1020.0102
ASP 1030.0204
TYR 1040.0188
ILE 1050.0143
CYS 1060.0285
LYS 1070.0412
ASN 1080.0358
GLY 1090.0244
ARG 1100.0159
LEU 1110.0103
ASP 1120.0135
GLU 1130.0062
LYS 1140.0120
GLU 1150.0060
SER 1160.0040
ARG 1170.0033
ARG 1180.0059
LEU 1190.0047
PHE 1200.0054
GLN 1210.0074
GLN 1220.0081
ILE 1230.0079
LEU 1240.0081
SER 1250.0108
GLY 1260.0128
VAL 1270.0107
ASP 1280.0155
TYR 1290.0190
CYS 1300.0145
HIS 1310.0154
ARG 1320.0207
HIS 1330.0190
MET 1340.0169
VAL 1350.0097
VAL 1360.0115
HIS 1370.0112
ARG 1380.0111
ASP 1390.0116
LEU 1400.0118
LYS 1410.0120
PRO 1420.0085
GLU 1430.0086
ASN 1440.0068
VAL 1450.0046
LEU 1460.0036
LEU 1470.0037
ASP 1480.0057
ALA 1490.0184
HIS 1500.0189
MET 1510.0084
ASN 1520.0061
ALA 1530.0072
LYS 1540.0069
ILE 1550.0050
ALA 1560.0064
ASP 1570.0025
PHE 1580.0022
GLY 1590.0027
LEU 1600.0082
SER 1610.0091
ASN 1620.0109
MET 1630.0140
MET 1640.0140
SER 1650.0127
ASP 1660.0065
GLY 1670.0038
GLU 1680.0038
PHE 1690.0083
LEU 1700.0148
ARG 1710.0196
SER 1730.0194
CYS 1740.0204
GLY 1750.0143
SER 1760.0109
PRO 1770.0096
ASN 1780.0100
TYR 1790.0095
ALA 1800.0068
ALA 1810.0029
PRO 1820.0107
GLU 1830.0154
VAL 1840.0167
ILE 1850.0216
SER 1860.0315
GLY 1870.0391
ARG 1880.0302
LEU 1890.0184
TYR 1900.0085
ALA 1910.0060
GLY 1920.0077
PRO 1930.0073
GLU 1940.0037
VAL 1950.0061
ASP 1960.0095
ILE 1970.0088
TRP 1980.0074
SER 1990.0101
SER 2000.0138
GLY 2010.0132
VAL 2020.0132
ILE 2030.0121
LEU 2040.0122
TYR 2050.0113
ALA 2060.0087
LEU 2070.0070
LEU 2080.0055
CYS 2090.0041
GLY 2100.0083
THR 2110.0099
LEU 2120.0116
PRO 2130.0107
PHE 2140.0086
ASP 2150.0100
ASP 2160.0072
ASP 2170.0258
HIS 2180.0093
VAL 2190.0145
PRO 2200.0202
THR 2210.0097
LEU 2220.0078
PHE 2230.0030
LYS 2240.0037
LYS 2250.0041
ILE 2260.0035
CYS 2270.0017
ASP 2280.0093
GLY 2290.0121
ILE 2300.0229
PHE 2310.0100
TYR 2320.0225
THR 2330.0137
PRO 2340.0079
GLN 2350.0057
TYR 2360.0012
LEU 2370.0046
ASN 2380.0040
PRO 2390.0098
SER 2400.0078
VAL 2410.0086
ILE 2420.0129
SER 2430.0129
LEU 2440.0126
LEU 2450.0154
LYS 2460.0146
HIS 2470.0148
MET 2480.0138
LEU 2490.0109
GLN 2500.0109
VAL 2510.0102
ASP 2520.0165
PRO 2530.0117
MET 2540.0173
LYS 2550.0204
ARG 2560.0140
ALA 2570.0057
THR 2580.0050
ILE 2590.0069
LYS 2600.0087
ASP 2610.0031
ILE 2620.0035
ARG 2630.0067
GLU 2640.0075
HIS 2650.0046
GLU 2660.0082
TRP 2670.0052
PHE 2680.0024
LYS 2690.0081
GLN 2700.0077
ASP 2710.0083
LEU 2720.0100
PRO 2730.0118
LYS 2740.0108
TYR 2750.0124
LEU 2760.0097
PHE 2770.0083
PRO 2780.0166
GLU 2790.0159
ASP 2800.0190
ALA 3210.0063
VAL 3220.0039
ALA 3230.0124
TYR 3240.0103
HIS 3250.0080
LEU 3260.0040
ILE 3270.0115
ILE 3280.0115
ASP 3290.0024
ASN 3300.0069
ARG 3310.0076
ARG 3320.0041
ILE 3330.0050
MET 3340.0075
ASN 3350.0075
GLU 3360.0069
ALA 3370.0057
LYS 3380.0057
ASP 3390.0065
PHE 3400.0067
TYR 3410.0045
LEU 3420.0015
ALA 3430.0016
THR 3440.0015
SER 3450.0045
PRO 3460.0026
PRO 3470.0027
ASP 3480.0040
SER 3490.0068
PHE 3500.0076
LEU 3510.0081
ASP 3520.0083
ASP 3530.0049
HIS 3540.0050
HIS 3550.0051
LEU 3560.0053
THR 3570.0087
ARG 3580.0083
PRO 3590.0074
HIS 3600.0065
PRO 3610.0051
GLU 3620.0026
ARG 3630.0024
VAL 3640.0020
PRO 3650.0026
PHE 3660.0023
LEU 3670.0023
VAL 3680.0021
ALA 3690.0020
GLU 3700.0042
THR 3710.0050
PRO 3720.0084
ARG 3730.0028
ALA 3740.0052
ALA 3940.0230
LYS 3950.0155
TRP 3960.0073
HIS 3970.0017
LEU 3980.0036
GLY 3990.0052
ILE 4000.0042
ARG 4010.0035
SER 4020.0044
GLN 4030.0041
SER 4040.0041
ARG 4050.0088
PRO 4060.0069
ASN 4070.0066
ASP 4080.0051
ILE 4090.0036
MET 4100.0037
ALA 4110.0033
GLU 4120.0114
VAL 4130.0057
CYS 4140.0095
ARG 4150.0166
ALA 4160.0126
ILE 4170.0127
LYS 4180.0219
GLN 4190.0217
LEU 4200.0202
ASP 4210.0195
TYR 4220.0110
GLU 4230.0074
TRP 4240.0103
LYS 4250.0133
VAL 4260.0132
VAL 4270.0128
ASN 4280.0142
PRO 4290.0174
TYR 4300.0121
TYR 4310.0116
LEU 4320.0122
ARG 4330.0099
VAL 4340.0087
ARG 4350.0073
ARG 4360.0116
LYS 4370.0152
ASN 4380.0102
PRO 4390.0335
VAL 4400.0202
THR 4410.0267
SER 4420.0184
THR 4430.0167
PHE 4440.0119
SER 4450.0036
LYS 4460.0046
MET 4470.0056
SER 4480.0083
LEU 4490.0081
GLN 4500.0081
LEU 4510.0121
TYR 4520.0103
GLN 4530.0094
VAL 4540.0039
ASP 4550.0132
SER 4560.0246
ARG 4570.0155
THR 4580.0059
TYR 4590.0061
LEU 4600.0067
LEU 4610.0067
ASP 4620.0063
PHE 4630.0044
ARG 4640.0046
SER 4650.0045
ILE 4660.0082
ASP 4670.0093
ASP 4680.0106
GLU 4690.0181
ILE 4700.0082
LYS 2030.0400
SER 2040.0236
PRO 2050.0139
PRO 2060.0140
ILE 2070.0153
LEU 2080.0143
PRO 2090.0165
PRO 2100.0180
HIS 2110.0142
LEU 2120.0130
LEU 2130.0167
GLN 2140.0170
VAL 2150.0061
ILE 2160.0069
LEU 2170.0050
ASN 2180.0043
LYS 2190.0041
ASP 2200.0062
THR 2210.0040
ASN 2220.0046
ILE 2230.0059
SER 2240.0068
CYS 2250.0051
ASP 2260.0038
PRO 2270.0030
ALA 2280.0025
LEU 2290.0018
LEU 2300.0020
PRO 2310.0032
GLU 2320.0058
PRO 2330.0118
ASN 2340.0087
HIS 2350.0063
VAL 2360.0060
MET 2370.0086
LEU 2380.0077
ASN 2390.0057
HIS 2400.0052
LEU 2410.0040
TYR 2420.0039
ALA 2430.0038
LEU 2440.0077
SER 2450.0099
ILE 2460.0081
LYS 2470.0094
ASP 2480.0146
SER 2490.0142
VAL 2500.0051
MET 2510.0041
VAL 2520.0058
LEU 2530.0076
SER 2540.0072
ALA 2550.0056
THR 2560.0061
HIS 2570.0096
ARG 2580.0093
TYR 2590.0114
LYS 2600.0155
LYS 2610.0126
LYS 2620.0115
TYR 2630.0076
VAL 2640.0079
THR 2650.0077
THR 2660.0061
LEU 2670.0069
LEU 2680.0088
TYR 2690.0080
LYS 2700.0073
PRO 2710.0069
PRO 5280.0264
GLY 5290.0165
SER 5300.0217
HIS 5310.0086
THR 5320.0084
ILE 5330.0128
GLU 5340.0086
PHE 5350.0065
PHE 5360.0100
GLU 5370.0104
MET 5380.0100
CYS 5390.0105
ALA 5400.0092
ASN 5410.0107
LEU 5420.0106
ILE 5430.0053
LYS 5440.0033
ILE 5450.0077
LEU 5460.0118
ALA 5470.0130
GLN 5480.0199

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.