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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0999
ARG 100.0170
VAL 110.0161
LYS 120.0154
ILE 130.0142
GLY 140.0149
HIS 150.0145
TYR 160.0131
ILE 170.0142
LEU 180.0132
GLY 190.0133
ASP 200.0122
THR 210.0111
LEU 220.0091
GLY 230.0081
VAL 240.0077
GLY 250.0071
THR 260.0065
PHE 270.0081
GLY 280.0094
LYS 290.0098
VAL 300.0091
LYS 310.0103
VAL 320.0101
GLY 330.0110
LYS 340.0119
HIS 350.0124
GLU 360.0145
LEU 370.0142
THR 380.0122
GLY 390.0119
HIS 400.0097
LYS 410.0091
VAL 420.0086
ALA 430.0082
VAL 440.0095
LYS 450.0091
ILE 460.0108
LEU 470.0113
ASN 480.0131
ARG 490.0141
GLN 500.0146
LYS 510.0126
ILE 520.0116
ARG 530.0133
SER 540.0129
LEU 550.0112
ASP 560.0112
VAL 570.0100
VAL 580.0115
GLY 590.0107
LYS 600.0084
ILE 610.0084
ARG 620.0097
ARG 630.0083
GLU 640.0070
ILE 650.0079
GLN 660.0083
ASN 670.0066
LEU 680.0059
LYS 690.0074
LEU 700.0068
PHE 710.0052
ARG 720.0044
HIS 730.0030
PRO 740.0019
HIS 750.0017
ILE 760.0029
ILE 770.0040
LYS 780.0051
LEU 790.0068
TYR 800.0080
GLN 810.0096
VAL 820.0109
ILE 830.0129
SER 840.0143
THR 850.0161
PRO 860.0175
SER 870.0164
ASP 880.0142
ILE 890.0127
PHE 900.0115
MET 910.0094
VAL 920.0091
MET 930.0073
GLU 940.0061
TYR 950.0065
VAL 960.0056
SER 970.0063
GLY 980.0055
GLY 990.0047
GLU 1000.0031
LEU 1010.0025
PHE 1020.0025
ASP 1030.0035
TYR 1040.0033
ILE 1050.0031
CYS 1060.0038
LYS 1070.0044
ASN 1080.0045
GLY 1090.0043
ARG 1100.0033
LEU 1110.0033
ASP 1120.0039
GLU 1130.0038
LYS 1140.0037
GLU 1150.0030
SER 1160.0023
ARG 1170.0023
ARG 1180.0020
LEU 1190.0011
PHE 1200.0011
GLN 1210.0015
GLN 1220.0005
ILE 1230.0007
LEU 1240.0019
SER 1250.0020
GLY 1260.0022
VAL 1270.0029
ASP 1280.0036
TYR 1290.0038
CYS 1300.0042
HIS 1310.0048
ARG 1320.0052
HIS 1330.0057
MET 1340.0059
VAL 1350.0052
VAL 1360.0047
HIS 1370.0038
ARG 1380.0035
ASP 1390.0030
LEU 1400.0023
LYS 1410.0016
PRO 1420.0013
GLU 1430.0023
ASN 1440.0026
VAL 1450.0021
LEU 1460.0030
LEU 1470.0033
ASP 1480.0042
ALA 1490.0051
HIS 1500.0041
MET 1510.0033
ASN 1520.0022
ALA 1530.0016
LYS 1540.0022
ILE 1550.0023
ALA 1560.0035
ASP 1570.0038
PHE 1580.0044
GLY 1590.0052
LEU 1600.0044
SER 1610.0046
ASN 1620.0057
MET 1630.0056
MET 1640.0056
SER 1650.0060
ASP 1660.0051
GLY 1670.0040
GLU 1680.0048
PHE 1690.0054
LEU 1700.0054
ARG 1710.0055
SER 1730.0047
CYS 1740.0041
GLY 1750.0031
SER 1760.0028
PRO 1770.0028
ASN 1780.0022
TYR 1790.0022
ALA 1800.0033
ALA 1810.0040
PRO 1820.0047
GLU 1830.0050
VAL 1840.0048
ILE 1850.0046
SER 1860.0052
GLY 1870.0054
ARG 1880.0058
LEU 1890.0056
TYR 1900.0054
ALA 1910.0058
GLY 1920.0052
PRO 1930.0048
GLU 1940.0044
VAL 1950.0042
ASP 1960.0037
ILE 1970.0034
TRP 1980.0033
SER 1990.0027
SER 2000.0021
GLY 2010.0024
VAL 2020.0017
ILE 2030.0009
LEU 2040.0014
TYR 2050.0016
ALA 2060.0011
LEU 2070.0016
LEU 2080.0025
CYS 2090.0025
GLY 2100.0021
THR 2110.0013
LEU 2120.0008
PRO 2130.0018
PHE 2140.0020
ASP 2150.0016
ASP 2160.0019
ASP 2170.0018
HIS 2180.0027
VAL 2190.0031
PRO 2200.0039
THR 2210.0036
LEU 2220.0031
PHE 2230.0038
LYS 2240.0042
LYS 2250.0036
ILE 2260.0037
CYS 2270.0045
ASP 2280.0046
GLY 2290.0043
ILE 2300.0040
PHE 2310.0031
TYR 2320.0033
THR 2330.0037
PRO 2340.0041
GLN 2350.0051
TYR 2360.0051
LEU 2370.0044
ASN 2380.0049
PRO 2390.0053
SER 2400.0050
VAL 2410.0039
ILE 2420.0040
SER 2430.0047
LEU 2440.0038
LEU 2450.0029
LYS 2460.0039
HIS 2470.0041
MET 2480.0034
LEU 2490.0034
GLN 2500.0042
VAL 2510.0045
ASP 2520.0050
PRO 2530.0047
MET 2540.0049
LYS 2550.0047
ARG 2560.0042
ALA 2570.0044
THR 2580.0045
ILE 2590.0041
LYS 2600.0047
ASP 2610.0049
ILE 2620.0039
ARG 2630.0039
GLU 2640.0049
HIS 2650.0048
GLU 2660.0051
TRP 2670.0043
PHE 2680.0035
LYS 2690.0041
GLN 2700.0042
ASP 2710.0037
LEU 2720.0030
PRO 2730.0023
LYS 2740.0028
TYR 2750.0017
LEU 2760.0019
PHE 2770.0031
PRO 2780.0040
GLU 2790.0047
ASP 2800.0042
ALA 3210.0303
VAL 3220.0237
ALA 3230.0191
TYR 3240.0197
HIS 3250.0155
LEU 3260.0118
ILE 3270.0129
ILE 3280.0132
ASP 3290.0095
ASN 3300.0084
ARG 3310.0093
ARG 3320.0089
ILE 3330.0094
MET 3340.0091
ASN 3350.0086
GLU 3360.0107
ALA 3370.0119
LYS 3380.0101
ASP 3390.0115
PHE 3400.0108
TYR 3410.0082
LEU 3420.0086
ALA 3430.0089
THR 3440.0128
SER 3450.0170
PRO 3460.0154
PRO 3470.0238
ASP 3480.0392
SER 3490.0363
PHE 3500.0344
LEU 3510.0322
ASP 3520.0126
ASP 3530.0144
HIS 3540.0287
HIS 3550.0202
LEU 3560.0328
THR 3570.0247
ARG 3580.0307
PRO 3590.0251
HIS 3600.0247
PRO 3610.0356
GLU 3620.0315
ARG 3630.0299
VAL 3640.0419
PRO 3650.0536
PHE 3660.0520
LEU 3670.0472
VAL 3680.0624
ALA 3690.0755
GLU 3700.0754
THR 3710.0704
PRO 3720.0829
ARG 3730.0999
ALA 3740.0974
ALA 3940.0184
LYS 3950.0149
TRP 3960.0115
HIS 3970.0094
LEU 3980.0060
GLY 3990.0063
ILE 4000.0085
ARG 4010.0078
SER 4020.0087
GLN 4030.0081
SER 4040.0085
ARG 4050.0070
PRO 4060.0065
ASN 4070.0101
ASP 4080.0117
ILE 4090.0109
MET 4100.0123
ALA 4110.0159
GLU 4120.0169
VAL 4130.0156
CYS 4140.0186
ARG 4150.0215
ALA 4160.0206
ILE 4170.0205
LYS 4180.0244
GLN 4190.0257
LEU 4200.0247
ASP 4210.0264
TYR 4220.0229
GLU 4230.0232
TRP 4240.0203
LYS 4250.0203
VAL 4260.0184
VAL 4270.0173
ASN 4280.0148
PRO 4290.0134
TYR 4300.0098
TYR 4310.0111
LEU 4320.0137
ARG 4330.0155
VAL 4340.0169
ARG 4350.0192
ARG 4360.0209
LYS 4370.0241
ASN 4380.0236
PRO 4390.0281
VAL 4400.0277
THR 4410.0255
SER 4420.0265
THR 4430.0224
PHE 4440.0209
SER 4450.0166
LYS 4460.0148
MET 4470.0115
SER 4480.0098
LEU 4490.0088
GLN 4500.0066
LEU 4510.0049
TYR 4520.0027
GLN 4530.0027
VAL 4540.0049
ASP 4550.0067
SER 4560.0061
ARG 4570.0053
THR 4580.0055
TYR 4590.0037
LEU 4600.0039
LEU 4610.0054
ASP 4620.0042
PHE 4630.0060
ARG 4640.0053
SER 4650.0068
ILE 4660.0101
ASP 4670.0114
ASP 4680.0160
GLU 4690.0202
ILE 4700.0290
LYS 2030.0113
SER 2040.0079
PRO 2050.0063
PRO 2060.0062
ILE 2070.0056
LEU 2080.0044
PRO 2090.0055
PRO 2100.0057
HIS 2110.0055
LEU 2120.0046
LEU 2130.0060
GLN 2140.0072
VAL 2150.0091
ILE 2160.0098
LEU 2170.0110
ASN 2180.0127
LYS 2190.0128
ASP 2200.0130
THR 2210.0112
ASN 2220.0082
ILE 2230.0096
SER 2240.0146
CYS 2250.0104
ASP 2260.0106
PRO 2270.0138
ALA 2280.0135
LEU 2290.0096
LEU 2300.0087
PRO 2310.0105
GLU 2320.0096
PRO 2330.0077
ASN 2340.0070
HIS 2350.0056
VAL 2360.0050
MET 2370.0041
LEU 2380.0029
ASN 2390.0025
HIS 2400.0028
LEU 2410.0059
TYR 2420.0074
ALA 2430.0109
LEU 2440.0143
SER 2450.0165
ILE 2460.0191
LYS 2470.0236
ASP 2480.0279
SER 2490.0266
VAL 2500.0232
MET 2510.0187
VAL 2520.0161
LEU 2530.0125
SER 2540.0091
ALA 2550.0055
THR 2560.0039
HIS 2570.0021
ARG 2580.0028
TYR 2590.0031
LYS 2600.0059
LYS 2610.0073
LYS 2620.0061
TYR 2630.0051
VAL 2640.0050
THR 2650.0063
THR 2660.0086
LEU 2670.0121
LEU 2680.0147
TYR 2690.0187
LYS 2700.0206
PRO 2710.0243
PRO 5280.0203
GLY 5290.0180
SER 5300.0135
HIS 5310.0119
THR 5320.0094
ILE 5330.0130
GLU 5340.0149
PHE 5350.0118
PHE 5360.0126
GLU 5370.0168
MET 5380.0163
CYS 5390.0138
ALA 5400.0171
ASN 5410.0198
LEU 5420.0173
ILE 5430.0163
LYS 5440.0206
ILE 5450.0211
LEU 5460.0174
ALA 5470.0182
GLN 5480.0214

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.