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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1131
ARG 100.0155
VAL 110.0149
LYS 120.0146
ILE 130.0136
GLY 140.0144
HIS 150.0145
TYR 160.0131
ILE 170.0137
LEU 180.0124
GLY 190.0120
ASP 200.0107
THR 210.0094
LEU 220.0077
GLY 230.0070
VAL 240.0064
GLY 250.0064
THR 260.0063
PHE 270.0078
GLY 280.0087
LYS 290.0087
VAL 300.0083
LYS 310.0094
VAL 320.0097
GLY 330.0108
LYS 340.0123
HIS 350.0132
GLU 360.0150
LEU 370.0154
THR 380.0142
GLY 390.0133
HIS 400.0115
LYS 410.0101
VAL 420.0090
ALA 430.0082
VAL 440.0090
LYS 450.0085
ILE 460.0101
LEU 470.0106
ASN 480.0123
ARG 490.0135
GLN 500.0139
LYS 510.0122
ILE 520.0117
ARG 530.0134
SER 540.0134
LEU 550.0123
ASP 560.0122
VAL 570.0104
VAL 580.0112
GLY 590.0103
LYS 600.0085
ILE 610.0080
ARG 620.0088
ARG 630.0075
GLU 640.0063
ILE 650.0069
GLN 660.0069
ASN 670.0053
LEU 680.0048
LYS 690.0059
LEU 700.0050
PHE 710.0037
ARG 720.0032
HIS 730.0023
PRO 740.0023
HIS 750.0017
ILE 760.0023
ILE 770.0038
LYS 780.0048
LEU 790.0062
TYR 800.0075
GLN 810.0088
VAL 820.0098
ILE 830.0117
SER 840.0131
THR 850.0148
PRO 860.0162
SER 870.0152
ASP 880.0132
ILE 890.0118
PHE 900.0108
MET 910.0087
VAL 920.0087
MET 930.0072
GLU 940.0066
TYR 950.0070
VAL 960.0062
SER 970.0064
GLY 980.0054
GLY 990.0041
GLU 1000.0027
LEU 1010.0026
PHE 1020.0021
ASP 1030.0032
TYR 1040.0036
ILE 1050.0033
CYS 1060.0038
LYS 1070.0047
ASN 1080.0052
GLY 1090.0052
ARG 1100.0043
LEU 1110.0043
ASP 1120.0050
GLU 1130.0046
LYS 1140.0046
GLU 1150.0040
SER 1160.0033
ARG 1170.0030
ARG 1180.0029
LEU 1190.0022
PHE 1200.0016
GLN 1210.0015
GLN 1220.0010
ILE 1230.0005
LEU 1240.0010
SER 1250.0006
GLY 1260.0010
VAL 1270.0018
ASP 1280.0021
TYR 1290.0021
CYS 1300.0028
HIS 1310.0034
ARG 1320.0035
HIS 1330.0038
MET 1340.0048
VAL 1350.0040
VAL 1360.0039
HIS 1370.0031
ARG 1380.0032
ASP 1390.0025
LEU 1400.0018
LYS 1410.0010
PRO 1420.0006
GLU 1430.0013
ASN 1440.0017
VAL 1450.0016
LEU 1460.0029
LEU 1470.0037
ASP 1480.0051
ALA 1490.0062
HIS 1500.0057
MET 1510.0044
ASN 1520.0034
ALA 1530.0024
LYS 1540.0023
ILE 1550.0018
ALA 1560.0028
ASP 1570.0032
PHE 1580.0037
GLY 1590.0047
LEU 1600.0043
SER 1610.0042
ASN 1620.0051
MET 1630.0049
MET 1640.0054
SER 1650.0063
ASP 1660.0075
GLY 1670.0063
GLU 1680.0062
PHE 1690.0052
LEU 1700.0051
ARG 1710.0048
SER 1730.0045
CYS 1740.0039
GLY 1750.0032
SER 1760.0025
PRO 1770.0027
ASN 1780.0024
TYR 1790.0022
ALA 1800.0032
ALA 1810.0040
PRO 1820.0045
GLU 1830.0049
VAL 1840.0046
ILE 1850.0046
SER 1860.0050
GLY 1870.0050
ARG 1880.0045
LEU 1890.0046
TYR 1900.0050
ALA 1910.0057
GLY 1920.0048
PRO 1930.0044
GLU 1940.0042
VAL 1950.0040
ASP 1960.0032
ILE 1970.0031
TRP 1980.0033
SER 1990.0025
SER 2000.0019
GLY 2010.0027
VAL 2020.0023
ILE 2030.0015
LEU 2040.0022
TYR 2050.0028
ALA 2060.0024
LEU 2070.0027
LEU 2080.0037
CYS 2090.0039
GLY 2100.0033
THR 2110.0028
LEU 2120.0023
PRO 2130.0032
PHE 2140.0032
ASP 2150.0027
ASP 2160.0030
ASP 2170.0025
HIS 2180.0034
VAL 2190.0035
PRO 2200.0045
THR 2210.0045
LEU 2220.0038
PHE 2230.0043
LYS 2240.0051
LYS 2250.0046
ILE 2260.0043
CYS 2270.0052
ASP 2280.0056
GLY 2290.0053
ILE 2300.0055
PHE 2310.0048
TYR 2320.0052
THR 2330.0054
PRO 2340.0059
GLN 2350.0069
TYR 2360.0065
LEU 2370.0057
ASN 2380.0059
PRO 2390.0063
SER 2400.0056
VAL 2410.0046
ILE 2420.0050
SER 2430.0053
LEU 2440.0042
LEU 2450.0037
LYS 2460.0047
HIS 2470.0044
MET 2480.0035
LEU 2490.0038
GLN 2500.0046
VAL 2510.0049
ASP 2520.0053
PRO 2530.0047
MET 2540.0050
LYS 2550.0047
ARG 2560.0040
ALA 2570.0041
THR 2580.0039
ILE 2590.0032
LYS 2600.0039
ASP 2610.0042
ILE 2620.0033
ARG 2630.0028
GLU 2640.0039
HIS 2650.0043
GLU 2660.0047
TRP 2670.0043
PHE 2680.0031
LYS 2690.0032
GLN 2700.0038
ASP 2710.0034
LEU 2720.0024
PRO 2730.0016
LYS 2740.0005
TYR 2750.0018
LEU 2760.0012
PHE 2770.0021
PRO 2780.0054
GLU 2790.0052
ASP 2800.0051
ALA 3210.0207
VAL 3220.0183
ALA 3230.0147
TYR 3240.0172
HIS 3250.0162
LEU 3260.0126
ILE 3270.0132
ILE 3280.0155
ASP 3290.0139
ASN 3300.0121
ARG 3310.0135
ARG 3320.0145
ILE 3330.0133
MET 3340.0128
ASN 3350.0143
GLU 3360.0155
ALA 3370.0139
LYS 3380.0156
ASP 3390.0170
PHE 3400.0140
TYR 3410.0116
LEU 3420.0116
ALA 3430.0124
THR 3440.0158
SER 3450.0164
PRO 3460.0178
PRO 3470.0299
ASP 3480.0522
SER 3490.0765
PHE 3500.0877
LEU 3510.1131
ASP 3520.0913
ASP 3530.0915
HIS 3540.0538
HIS 3550.0387
LEU 3560.0366
THR 3570.0351
ARG 3580.0395
PRO 3590.0327
HIS 3600.0359
PRO 3610.0461
GLU 3620.0434
ARG 3630.0348
VAL 3640.0384
PRO 3650.0448
PHE 3660.0374
LEU 3670.0267
VAL 3680.0321
ALA 3690.0377
GLU 3700.0319
THR 3710.0194
PRO 3720.0183
ARG 3730.0254
ALA 3740.0284
ALA 3940.0092
LYS 3950.0076
TRP 3960.0050
HIS 3970.0047
LEU 3980.0026
GLY 3990.0032
ILE 4000.0066
ARG 4010.0080
SER 4020.0107
GLN 4030.0125
SER 4040.0134
ARG 4050.0125
PRO 4060.0097
ASN 4070.0118
ASP 4080.0145
ILE 4090.0127
MET 4100.0125
ALA 4110.0160
GLU 4120.0168
VAL 4130.0144
CYS 4140.0168
ARG 4150.0196
ALA 4160.0179
ILE 4170.0175
LYS 4180.0211
GLN 4190.0218
LEU 4200.0201
ASP 4210.0221
TYR 4220.0194
GLU 4230.0201
TRP 4240.0176
LYS 4250.0173
VAL 4260.0152
VAL 4270.0135
ASN 4280.0109
PRO 4290.0106
TYR 4300.0080
TYR 4310.0089
LEU 4320.0116
ARG 4330.0135
VAL 4340.0146
ARG 4350.0169
ARG 4360.0178
LYS 4370.0207
ASN 4380.0194
PRO 4390.0226
VAL 4400.0221
THR 4410.0219
SER 4420.0234
THR 4430.0206
PHE 4440.0193
SER 4450.0152
LYS 4460.0138
MET 4470.0104
SER 4480.0088
LEU 4490.0075
GLN 4500.0054
LEU 4510.0046
TYR 4520.0022
GLN 4530.0040
VAL 4540.0061
ASP 4550.0092
SER 4560.0101
ARG 4570.0112
THR 4580.0095
TYR 4590.0069
LEU 4600.0048
LEU 4610.0051
ASP 4620.0031
PHE 4630.0042
ARG 4640.0052
SER 4650.0074
ILE 4660.0113
ASP 4670.0141
ASP 4680.0184
GLU 4690.0235
ILE 4700.0288
LYS 2030.0041
SER 2040.0034
PRO 2050.0033
PRO 2060.0013
ILE 2070.0021
LEU 2080.0025
PRO 2090.0045
PRO 2100.0050
HIS 2110.0055
LEU 2120.0041
LEU 2130.0049
GLN 2140.0062
VAL 2150.0058
ILE 2160.0067
LEU 2170.0059
ASN 2180.0065
LYS 2190.0082
ASP 2200.0096
THR 2210.0107
ASN 2220.0149
ILE 2230.0190
SER 2240.0261
CYS 2250.0214
ASP 2260.0225
PRO 2270.0220
ALA 2280.0176
LEU 2290.0108
LEU 2300.0087
PRO 2310.0094
GLU 2320.0099
PRO 2330.0081
ASN 2340.0079
HIS 2350.0077
VAL 2360.0067
MET 2370.0055
LEU 2380.0061
ASN 2390.0052
HIS 2400.0028
LEU 2410.0014
TYR 2420.0016
ALA 2430.0039
LEU 2440.0062
SER 2450.0090
ILE 2460.0107
LYS 2470.0132
ASP 2480.0157
SER 2490.0145
VAL 2500.0110
MET 2510.0086
VAL 2520.0058
LEU 2530.0039
SER 2540.0010
ALA 2550.0023
THR 2560.0046
HIS 2570.0063
ARG 2580.0081
TYR 2590.0091
LYS 2600.0109
LYS 2610.0109
LYS 2620.0085
TYR 2630.0079
VAL 2640.0059
THR 2650.0039
THR 2660.0027
LEU 2670.0011
LEU 2680.0032
TYR 2690.0058
LYS 2700.0084
PRO 2710.0115
PRO 5280.0186
GLY 5290.0147
SER 5300.0113
HIS 5310.0115
THR 5320.0079
ILE 5330.0075
GLU 5340.0107
PHE 5350.0087
PHE 5360.0068
GLU 5370.0101
MET 5380.0115
CYS 5390.0092
ALA 5400.0105
ASN 5410.0139
LEU 5420.0132
ILE 5430.0119
LYS 5440.0149
ILE 5450.0171
LEU 5460.0149
ALA 5470.0148
GLN 5480.0183

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.