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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0713
ARG 100.0243
VAL 110.0233
LYS 120.0216
ILE 130.0204
GLY 140.0222
HIS 150.0202
TYR 160.0169
ILE 170.0181
LEU 180.0167
GLY 190.0162
ASP 200.0150
THR 210.0147
LEU 220.0112
GLY 230.0104
VAL 240.0115
GLY 250.0098
THR 260.0090
PHE 270.0125
GLY 280.0137
LYS 290.0138
VAL 300.0113
LYS 310.0124
VAL 320.0107
GLY 330.0123
LYS 340.0127
HIS 350.0145
GLU 360.0175
LEU 370.0175
THR 380.0134
GLY 390.0111
HIS 400.0095
LYS 410.0078
VAL 420.0085
ALA 430.0081
VAL 440.0112
LYS 450.0113
ILE 460.0149
LEU 470.0161
ASN 480.0199
ARG 490.0217
GLN 500.0233
LYS 510.0201
ILE 520.0174
ARG 530.0204
SER 540.0209
LEU 550.0168
ASP 560.0149
VAL 570.0127
VAL 580.0153
GLY 590.0134
LYS 600.0096
ILE 610.0103
ARG 620.0125
ARG 630.0102
GLU 640.0084
ILE 650.0101
GLN 660.0114
ASN 670.0088
LEU 680.0082
LYS 690.0107
LEU 700.0109
PHE 710.0088
ARG 720.0087
HIS 730.0072
PRO 740.0063
HIS 750.0052
ILE 760.0053
ILE 770.0048
LYS 780.0069
LEU 790.0093
TYR 800.0118
GLN 810.0142
VAL 820.0160
ILE 830.0190
SER 840.0214
THR 850.0244
PRO 860.0271
SER 870.0253
ASP 880.0212
ILE 890.0183
PHE 900.0160
MET 910.0123
VAL 920.0116
MET 930.0082
GLU 940.0060
TYR 950.0046
VAL 960.0032
SER 970.0049
GLY 980.0055
GLY 990.0052
GLU 1000.0045
LEU 1010.0049
PHE 1020.0053
ASP 1030.0064
TYR 1040.0065
ILE 1050.0071
CYS 1060.0085
LYS 1070.0089
ASN 1080.0094
GLY 1090.0097
ARG 1100.0083
LEU 1110.0082
ASP 1120.0093
GLU 1130.0091
LYS 1140.0095
GLU 1150.0081
SER 1160.0070
ARG 1170.0074
ARG 1180.0074
LEU 1190.0059
PHE 1200.0059
GLN 1210.0068
GLN 1220.0061
ILE 1230.0052
LEU 1240.0062
SER 1250.0069
GLY 1260.0061
VAL 1270.0059
ASP 1280.0075
TYR 1290.0078
CYS 1300.0069
HIS 1310.0074
ARG 1320.0086
HIS 1330.0083
MET 1340.0070
VAL 1350.0068
VAL 1360.0059
HIS 1370.0048
ARG 1380.0043
ASP 1390.0040
LEU 1400.0037
LYS 1410.0037
PRO 1420.0038
GLU 1430.0042
ASN 1440.0036
VAL 1450.0033
LEU 1460.0035
LEU 1470.0040
ASP 1480.0039
ALA 1490.0050
HIS 1500.0060
MET 1510.0057
ASN 1520.0051
ALA 1530.0044
LYS 1540.0038
ILE 1550.0037
ALA 1560.0036
ASP 1570.0037
PHE 1580.0047
GLY 1590.0055
LEU 1600.0044
SER 1610.0051
ASN 1620.0064
MET 1630.0061
MET 1640.0054
SER 1650.0049
ASP 1660.0022
GLY 1670.0029
GLU 1680.0046
PHE 1690.0071
LEU 1700.0073
ARG 1710.0085
SER 1730.0066
CYS 1740.0061
GLY 1750.0046
SER 1760.0050
PRO 1770.0054
ASN 1780.0046
TYR 1790.0039
ALA 1800.0046
ALA 1810.0049
PRO 1820.0057
GLU 1830.0065
VAL 1840.0064
ILE 1850.0064
SER 1860.0077
GLY 1870.0092
ARG 1880.0103
LEU 1890.0095
TYR 1900.0077
ALA 1910.0065
GLY 1920.0061
PRO 1930.0059
GLU 1940.0057
VAL 1950.0053
ASP 1960.0049
ILE 1970.0052
TRP 1980.0046
SER 1990.0042
SER 2000.0044
GLY 2010.0047
VAL 2020.0043
ILE 2030.0044
LEU 2040.0052
TYR 2050.0054
ALA 2060.0055
LEU 2070.0061
LEU 2080.0071
CYS 2090.0072
GLY 2100.0070
THR 2110.0064
LEU 2120.0053
PRO 2130.0047
PHE 2140.0046
ASP 2150.0056
ASP 2160.0064
ASP 2170.0077
HIS 2180.0077
VAL 2190.0071
PRO 2200.0071
THR 2210.0062
LEU 2220.0056
PHE 2230.0054
LYS 2240.0053
LYS 2250.0046
ILE 2260.0045
CYS 2270.0049
ASP 2280.0045
GLY 2290.0044
ILE 2300.0044
PHE 2310.0049
TYR 2320.0060
THR 2330.0071
PRO 2340.0085
GLN 2350.0101
TYR 2360.0104
LEU 2370.0091
ASN 2380.0098
PRO 2390.0098
SER 2400.0097
VAL 2410.0081
ILE 2420.0075
SER 2430.0079
LEU 2440.0072
LEU 2450.0058
LYS 2460.0058
HIS 2470.0064
MET 2480.0054
LEU 2490.0048
GLN 2500.0051
VAL 2510.0052
ASP 2520.0060
PRO 2530.0063
MET 2540.0072
LYS 2550.0065
ARG 2560.0062
ALA 2570.0070
THR 2580.0075
ILE 2590.0076
LYS 2600.0087
ASP 2610.0084
ILE 2620.0079
ARG 2630.0089
GLU 2640.0101
HIS 2650.0094
GLU 2660.0106
TRP 2670.0095
PHE 2680.0088
LYS 2690.0102
GLN 2700.0105
ASP 2710.0104
LEU 2720.0089
PRO 2730.0089
LYS 2740.0092
TYR 2750.0091
LEU 2760.0084
PHE 2770.0085
PRO 2780.0084
GLU 2790.0072
ASP 2800.0086
ALA 3210.0503
VAL 3220.0378
ALA 3230.0273
TYR 3240.0267
HIS 3250.0214
LEU 3260.0125
ILE 3270.0119
ILE 3280.0143
ASP 3290.0098
ASN 3300.0058
ARG 3310.0080
ARG 3320.0095
ILE 3330.0090
MET 3340.0089
ASN 3350.0075
GLU 3360.0083
ALA 3370.0099
LYS 3380.0097
ASP 3390.0113
PHE 3400.0122
TYR 3410.0111
LEU 3420.0118
ALA 3430.0116
THR 3440.0116
SER 3450.0149
PRO 3460.0134
PRO 3470.0177
ASP 3480.0299
SER 3490.0330
PHE 3500.0399
LEU 3510.0432
ASP 3520.0343
ASP 3530.0402
HIS 3540.0342
HIS 3550.0241
LEU 3560.0198
THR 3570.0113
ARG 3580.0102
PRO 3590.0072
HIS 3600.0074
PRO 3610.0111
GLU 3620.0098
ARG 3630.0053
VAL 3640.0087
PRO 3650.0093
PHE 3660.0135
LEU 3670.0178
VAL 3680.0265
ALA 3690.0310
GLU 3700.0391
THR 3710.0447
PRO 3720.0544
ARG 3730.0713
ALA 3740.0709
ALA 3940.0249
LYS 3950.0211
TRP 3960.0165
HIS 3970.0142
LEU 3980.0098
GLY 3990.0065
ILE 4000.0092
ARG 4010.0137
SER 4020.0168
GLN 4030.0224
SER 4040.0218
ARG 4050.0244
PRO 4060.0218
ASN 4070.0230
ASP 4080.0210
ILE 4090.0159
MET 4100.0161
ALA 4110.0172
GLU 4120.0114
VAL 4130.0090
CYS 4140.0131
ARG 4150.0108
ALA 4160.0067
ILE 4170.0112
LYS 4180.0149
GLN 4190.0117
LEU 4200.0142
ASP 4210.0191
TYR 4220.0184
GLU 4230.0220
TRP 4240.0197
LYS 4250.0230
VAL 4260.0232
VAL 4270.0242
ASN 4280.0240
PRO 4290.0235
TYR 4300.0187
TYR 4310.0169
LEU 4320.0162
ARG 4330.0176
VAL 4340.0161
ARG 4350.0198
ARG 4360.0208
LYS 4370.0264
ASN 4380.0272
PRO 4390.0308
VAL 4400.0348
THR 4410.0361
SER 4420.0346
THR 4430.0309
PHE 4440.0269
SER 4450.0209
LYS 4460.0174
MET 4470.0120
SER 4480.0104
LEU 4490.0087
GLN 4500.0111
LEU 4510.0133
TYR 4520.0152
GLN 4530.0196
VAL 4540.0201
ASP 4550.0255
SER 4560.0298
ARG 4570.0283
THR 4580.0230
TYR 4590.0183
LEU 4600.0131
LEU 4610.0088
ASP 4620.0057
PHE 4630.0021
ARG 4640.0045
SER 4650.0083
ILE 4660.0140
ASP 4670.0187
ASP 4680.0249
GLU 4690.0362
ILE 4700.0583
LYS 2030.0322
SER 2040.0278
PRO 2050.0212
PRO 2060.0181
ILE 2070.0177
LEU 2080.0137
PRO 2090.0108
PRO 2100.0114
HIS 2110.0087
LEU 2120.0078
LEU 2130.0111
GLN 2140.0105
VAL 2150.0120
ILE 2160.0125
LEU 2170.0148
ASN 2180.0147
LYS 2190.0120
ASP 2200.0121
THR 2210.0118
ASN 2220.0090
ILE 2230.0064
SER 2240.0059
CYS 2250.0091
ASP 2260.0115
PRO 2270.0115
ALA 2280.0142
LEU 2290.0133
LEU 2300.0136
PRO 2310.0115
GLU 2320.0098
PRO 2330.0076
ASN 2340.0054
HIS 2350.0023
VAL 2360.0039
MET 2370.0045
LEU 2380.0030
ASN 2390.0044
HIS 2400.0027
LEU 2410.0053
TYR 2420.0095
ALA 2430.0132
LEU 2440.0179
SER 2450.0202
ILE 2460.0199
LYS 2470.0254
ASP 2480.0277
SER 2490.0241
VAL 2500.0237
MET 2510.0185
VAL 2520.0184
LEU 2530.0140
SER 2540.0124
ALA 2550.0093
THR 2560.0088
HIS 2570.0089
ARG 2580.0081
TYR 2590.0103
LYS 2600.0089
LYS 2610.0072
LYS 2620.0089
TYR 2630.0098
VAL 2640.0122
THR 2650.0122
THR 2660.0168
LEU 2670.0187
LEU 2680.0202
TYR 2690.0232
LYS 2700.0224
PRO 2710.0240
PRO 5280.0375
GLY 5290.0317
SER 5300.0262
HIS 5310.0215
THR 5320.0175
ILE 5330.0197
GLU 5340.0195
PHE 5350.0139
PHE 5360.0135
GLU 5370.0166
MET 5380.0131
CYS 5390.0082
ALA 5400.0112
ASN 5410.0107
LEU 5420.0054
ILE 5430.0054
LYS 5440.0087
ILE 5450.0040
LEU 5460.0046
ALA 5470.0097
GLN 5480.0127

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.