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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0574
ARG 100.0303
VAL 110.0217
LYS 120.0210
ILE 130.0159
GLY 140.0231
HIS 150.0297
TYR 160.0246
ILE 170.0266
LEU 180.0233
GLY 190.0282
ASP 200.0294
THR 210.0256
LEU 220.0226
GLY 230.0189
VAL 240.0221
GLY 250.0159
THR 260.0178
PHE 270.0222
GLY 280.0176
LYS 290.0174
VAL 300.0137
LYS 310.0177
VAL 320.0203
GLY 330.0209
LYS 340.0294
HIS 350.0330
GLU 360.0388
LEU 370.0453
THR 380.0448
GLY 390.0397
HIS 400.0325
LYS 410.0259
VAL 420.0181
ALA 430.0122
VAL 440.0078
LYS 450.0050
ILE 460.0085
LEU 470.0126
ASN 480.0159
ARG 490.0210
GLN 500.0264
LYS 510.0278
ILE 520.0262
ARG 530.0319
SER 540.0375
LEU 550.0364
ASP 560.0365
VAL 570.0285
VAL 580.0282
GLY 590.0280
LYS 600.0224
ILE 610.0177
ARG 620.0211
ARG 630.0204
GLU 640.0149
ILE 650.0151
GLN 660.0200
ASN 670.0178
LEU 680.0143
LYS 690.0173
LEU 700.0197
PHE 710.0166
ARG 720.0178
HIS 730.0155
PRO 740.0153
HIS 750.0119
ILE 760.0105
ILE 770.0093
LYS 780.0126
LEU 790.0125
TYR 800.0164
GLN 810.0144
VAL 820.0117
ILE 830.0104
SER 840.0105
THR 850.0080
PRO 860.0134
SER 870.0133
ASP 880.0104
ILE 890.0082
PHE 900.0017
MET 910.0041
VAL 920.0085
MET 930.0095
GLU 940.0133
TYR 950.0149
VAL 960.0156
SER 970.0153
GLY 980.0142
GLY 990.0110
GLU 1000.0070
LEU 1010.0080
PHE 1020.0077
ASP 1030.0114
TYR 1040.0117
ILE 1050.0112
CYS 1060.0144
LYS 1070.0163
ASN 1080.0164
GLY 1090.0146
ARG 1100.0109
LEU 1110.0109
ASP 1120.0121
GLU 1130.0108
LYS 1140.0137
GLU 1150.0124
SER 1160.0088
ARG 1170.0096
ARG 1180.0120
LEU 1190.0094
PHE 1200.0075
GLN 1210.0108
GLN 1220.0113
ILE 1230.0082
LEU 1240.0094
SER 1250.0125
GLY 1260.0112
VAL 1270.0105
ASP 1280.0135
TYR 1290.0150
CYS 1300.0134
HIS 1310.0151
ARG 1320.0176
HIS 1330.0175
MET 1340.0180
VAL 1350.0151
VAL 1360.0136
HIS 1370.0112
ARG 1380.0109
ASP 1390.0081
LEU 1400.0057
LYS 1410.0030
PRO 1420.0018
GLU 1430.0030
ASN 1440.0005
VAL 1450.0033
LEU 1460.0067
LEU 1470.0107
ASP 1480.0144
ALA 1490.0183
HIS 1500.0187
MET 1510.0146
ASN 1520.0131
ALA 1530.0092
LYS 1540.0084
ILE 1550.0059
ALA 1560.0039
ASP 1570.0047
PHE 1580.0093
GLY 1590.0116
LEU 1600.0129
SER 1610.0135
ASN 1620.0169
MET 1630.0193
MET 1640.0175
SER 1650.0170
ASP 1660.0136
GLY 1670.0122
GLU 1680.0134
PHE 1690.0146
LEU 1700.0159
ARG 1710.0160
SER 1730.0134
CYS 1740.0124
GLY 1750.0101
SER 1760.0080
PRO 1770.0095
ASN 1780.0074
TYR 1790.0060
ALA 1800.0091
ALA 1810.0106
PRO 1820.0117
GLU 1830.0133
VAL 1840.0130
ILE 1850.0123
SER 1860.0136
GLY 1870.0145
ARG 1880.0143
LEU 1890.0143
TYR 1900.0141
ALA 1910.0154
GLY 1920.0145
PRO 1930.0130
GLU 1940.0121
VAL 1950.0115
ASP 1960.0102
ILE 1970.0089
TRP 1980.0081
SER 1990.0066
SER 2000.0050
GLY 2010.0044
VAL 2020.0031
ILE 2030.0008
LEU 2040.0022
TYR 2050.0016
ALA 2060.0042
LEU 2070.0054
LEU 2080.0059
CYS 2090.0068
GLY 2100.0082
THR 2110.0077
LEU 2120.0058
PRO 2130.0060
PHE 2140.0084
ASP 2150.0095
ASP 2160.0123
ASP 2170.0138
HIS 2180.0155
VAL 2190.0139
PRO 2200.0161
THR 2210.0155
LEU 2220.0123
PHE 2230.0127
LYS 2240.0145
LYS 2250.0120
ILE 2260.0105
CYS 2270.0128
ASP 2280.0127
GLY 2290.0102
ILE 2300.0096
PHE 2310.0074
TYR 2320.0068
THR 2330.0046
PRO 2340.0076
GLN 2350.0089
TYR 2360.0093
LEU 2370.0061
ASN 2380.0064
PRO 2390.0043
SER 2400.0065
VAL 2410.0049
ILE 2420.0016
SER 2430.0044
LEU 2440.0055
LEU 2450.0034
LYS 2460.0052
HIS 2470.0075
MET 2480.0073
LEU 2490.0073
GLN 2500.0099
VAL 2510.0113
ASP 2520.0132
PRO 2530.0133
MET 2540.0144
LYS 2550.0131
ARG 2560.0115
ALA 2570.0108
THR 2580.0129
ILE 2590.0129
LYS 2600.0152
ASP 2610.0132
ILE 2620.0112
ARG 2630.0138
GLU 2640.0148
HIS 2650.0118
GLU 2660.0125
TRP 2670.0104
PHE 2680.0113
LYS 2690.0147
GLN 2700.0149
ASP 2710.0171
LEU 2720.0158
PRO 2730.0171
LYS 2740.0187
TYR 2750.0190
LEU 2760.0165
PHE 2770.0173
PRO 2780.0195
GLU 2790.0197
ASP 2800.0211
ALA 3210.0097
VAL 3220.0080
ALA 3230.0061
TYR 3240.0024
HIS 3250.0033
LEU 3260.0048
ILE 3270.0050
ILE 3280.0039
ASP 3290.0038
ASN 3300.0064
ARG 3310.0071
ARG 3320.0056
ILE 3330.0064
MET 3340.0066
ASN 3350.0065
GLU 3360.0077
ALA 3370.0028
LYS 3380.0048
ASP 3390.0063
PHE 3400.0058
TYR 3410.0080
LEU 3420.0112
ALA 3430.0106
THR 3440.0095
SER 3450.0094
PRO 3460.0088
PRO 3470.0089
ASP 3480.0178
SER 3490.0140
PHE 3500.0184
LEU 3510.0127
ASP 3520.0058
ASP 3530.0176
HIS 3540.0210
HIS 3550.0122
LEU 3560.0134
THR 3570.0046
ARG 3580.0058
PRO 3590.0066
HIS 3600.0100
PRO 3610.0129
GLU 3620.0132
ARG 3630.0101
VAL 3640.0108
PRO 3650.0144
PHE 3660.0099
LEU 3670.0072
VAL 3680.0140
ALA 3690.0188
GLU 3700.0154
THR 3710.0174
PRO 3720.0251
ARG 3730.0352
ALA 3740.0308
ALA 3940.0078
LYS 3950.0041
TRP 3960.0040
HIS 3970.0026
LEU 3980.0019
GLY 3990.0028
ILE 4000.0064
ARG 4010.0086
SER 4020.0127
GLN 4030.0161
SER 4040.0190
ARG 4050.0209
PRO 4060.0176
ASN 4070.0196
ASP 4080.0211
ILE 4090.0169
MET 4100.0151
ALA 4110.0191
GLU 4120.0189
VAL 4130.0145
CYS 4140.0149
ARG 4150.0191
ALA 4160.0177
ILE 4170.0144
LYS 4180.0174
GLN 4190.0207
LEU 4200.0187
ASP 4210.0174
TYR 4220.0127
GLU 4230.0089
TRP 4240.0070
LYS 4250.0060
VAL 4260.0097
VAL 4270.0105
ASN 4280.0133
PRO 4290.0152
TYR 4300.0121
TYR 4310.0087
LEU 4320.0062
ARG 4330.0027
VAL 4340.0046
ARG 4350.0070
ARG 4360.0121
LYS 4370.0169
ASN 4380.0213
PRO 4390.0268
VAL 4400.0308
THR 4410.0296
SER 4420.0249
THR 4430.0213
PHE 4440.0153
SER 4450.0127
LYS 4460.0078
MET 4470.0045
SER 4480.0025
LEU 4490.0038
GLN 4500.0065
LEU 4510.0081
TYR 4520.0094
GLN 4530.0117
VAL 4540.0107
ASP 4550.0137
SER 4560.0181
ARG 4570.0176
THR 4580.0134
TYR 4590.0113
LEU 4600.0074
LEU 4610.0062
ASP 4620.0033
PHE 4630.0020
ARG 4640.0041
SER 4650.0068
ILE 4660.0093
ASP 4670.0150
ASP 4680.0181
GLU 4690.0349
ILE 4700.0574
LYS 2030.0204
SER 2040.0184
PRO 2050.0143
PRO 2060.0125
ILE 2070.0122
LEU 2080.0102
PRO 2090.0118
PRO 2100.0118
HIS 2110.0118
LEU 2120.0087
LEU 2130.0081
GLN 2140.0093
VAL 2150.0076
ILE 2160.0108
LEU 2170.0097
ASN 2180.0071
LYS 2190.0091
ASP 2200.0103
THR 2210.0097
ASN 2220.0077
ILE 2230.0066
SER 2240.0075
CYS 2250.0094
ASP 2260.0108
PRO 2270.0100
ALA 2280.0118
LEU 2290.0118
LEU 2300.0132
PRO 2310.0133
GLU 2320.0142
PRO 2330.0147
ASN 2340.0146
HIS 2350.0136
VAL 2360.0126
MET 2370.0100
LEU 2380.0103
ASN 2390.0084
HIS 2400.0053
LEU 2410.0042
TYR 2420.0046
ALA 2430.0069
LEU 2440.0089
SER 2450.0114
ILE 2460.0163
LYS 2470.0205
ASP 2480.0260
SER 2490.0254
VAL 2500.0220
MET 2510.0168
VAL 2520.0141
LEU 2530.0111
SER 2540.0094
ALA 2550.0092
THR 2560.0120
HIS 2570.0137
ARG 2580.0166
TYR 2590.0194
LYS 2600.0220
LYS 2610.0215
LYS 2620.0205
TYR 2630.0183
VAL 2640.0172
THR 2650.0144
THR 2660.0161
LEU 2670.0152
LEU 2680.0167
TYR 2690.0197
LYS 2700.0212
PRO 2710.0244
PRO 5280.0342
GLY 5290.0289
SER 5300.0240
HIS 5310.0185
THR 5320.0161
ILE 5330.0176
GLU 5340.0169
PHE 5350.0118
PHE 5360.0126
GLU 5370.0162
MET 5380.0131
CYS 5390.0106
ALA 5400.0150
ASN 5410.0168
LEU 5420.0140
ILE 5430.0141
LYS 5440.0188
ILE 5450.0198
LEU 5460.0173
ALA 5470.0181
GLN 5480.0223

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.