CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1975
ARG 100.0206
VAL 110.0188
LYS 120.0195
ILE 130.0182
GLY 140.0221
HIS 150.0224
TYR 160.0178
ILE 170.0182
LEU 180.0148
GLY 190.0147
ASP 200.0128
THR 210.0098
LEU 220.0067
GLY 230.0037
VAL 240.0028
GLY 250.0010
THR 260.0030
PHE 270.0019
GLY 280.0032
LYS 290.0045
VAL 300.0051
LYS 310.0082
VAL 320.0095
GLY 330.0122
LYS 340.0155
HIS 350.0187
GLU 360.0226
LEU 370.0249
THR 380.0212
GLY 390.0179
HIS 400.0139
LYS 410.0109
VAL 420.0095
ALA 430.0071
VAL 440.0082
LYS 450.0065
ILE 460.0076
LEU 470.0076
ASN 480.0090
ARG 490.0109
GLN 500.0089
LYS 510.0061
ILE 520.0080
ARG 530.0104
SER 540.0086
LEU 550.0094
ASP 560.0117
VAL 570.0100
VAL 580.0114
GLY 590.0122
LYS 600.0098
ILE 610.0084
ARG 620.0102
ARG 630.0100
GLU 640.0084
ILE 650.0090
GLN 660.0102
ASN 670.0091
LEU 680.0078
LYS 690.0094
LEU 700.0093
PHE 710.0076
ARG 720.0071
HIS 730.0059
PRO 740.0049
HIS 750.0047
ILE 760.0056
ILE 770.0055
LYS 780.0069
LEU 790.0089
TYR 800.0110
GLN 810.0121
VAL 820.0130
ILE 830.0152
SER 840.0161
THR 850.0176
PRO 860.0184
SER 870.0150
ASP 880.0124
ILE 890.0119
PHE 900.0112
MET 910.0092
VAL 920.0099
MET 930.0079
GLU 940.0069
TYR 950.0057
VAL 960.0042
SER 970.0043
GLY 980.0022
GLY 990.0024
GLU 1000.0035
LEU 1010.0032
PHE 1020.0038
ASP 1030.0036
TYR 1040.0034
ILE 1050.0037
CYS 1060.0041
LYS 1070.0037
ASN 1080.0036
GLY 1090.0040
ARG 1100.0042
LEU 1110.0037
ASP 1120.0037
GLU 1130.0037
LYS 1140.0031
GLU 1150.0031
SER 1160.0037
ARG 1170.0037
ARG 1180.0030
LEU 1190.0036
PHE 1200.0042
GLN 1210.0040
GLN 1220.0040
ILE 1230.0047
LEU 1240.0052
SER 1250.0050
GLY 1260.0055
VAL 1270.0060
ASP 1280.0063
TYR 1290.0065
CYS 1300.0068
HIS 1310.0071
ARG 1320.0072
HIS 1330.0074
MET 1340.0074
VAL 1350.0073
VAL 1360.0072
HIS 1370.0068
ARG 1380.0070
ASP 1390.0068
LEU 1400.0063
LYS 1410.0060
PRO 1420.0048
GLU 1430.0050
ASN 1440.0051
VAL 1450.0040
LEU 1460.0033
LEU 1470.0024
ASP 1480.0030
ALA 1490.0028
HIS 1500.0023
MET 1510.0022
ASN 1520.0029
ALA 1530.0035
LYS 1540.0040
ILE 1550.0047
ALA 1560.0049
ASP 1570.0051
PHE 1580.0062
GLY 1590.0065
LEU 1600.0074
SER 1610.0076
ASN 1620.0081
MET 1630.0070
MET 1640.0067
SER 1650.0066
ASP 1660.0053
GLY 1670.0052
GLU 1680.0057
PHE 1690.0062
LEU 1700.0069
ARG 1710.0072
SER 1730.0084
CYS 1740.0083
GLY 1750.0079
SER 1760.0083
PRO 1770.0087
ASN 1780.0081
TYR 1790.0070
ALA 1800.0076
ALA 1810.0076
PRO 1820.0077
GLU 1830.0075
VAL 1840.0079
ILE 1850.0088
SER 1860.0081
GLY 1870.0082
ARG 1880.0063
LEU 1890.0061
TYR 1900.0063
ALA 1910.0066
GLY 1920.0068
PRO 1930.0068
GLU 1940.0065
VAL 1950.0069
ASP 1960.0066
ILE 1970.0062
TRP 1980.0066
SER 1990.0066
SER 2000.0059
GLY 2010.0060
VAL 2020.0063
ILE 2030.0057
LEU 2040.0052
TYR 2050.0058
ALA 2060.0054
LEU 2070.0046
LEU 2080.0048
CYS 2090.0055
GLY 2100.0053
THR 2110.0061
LEU 2120.0071
PRO 2130.0073
PHE 2140.0081
ASP 2150.0091
ASP 2160.0106
ASP 2170.0118
HIS 2180.0123
VAL 2190.0115
PRO 2200.0117
THR 2210.0113
LEU 2220.0102
PHE 2230.0098
LYS 2240.0101
LYS 2250.0095
ILE 2260.0085
CYS 2270.0086
ASP 2280.0086
GLY 2290.0078
ILE 2300.0082
PHE 2310.0077
TYR 2320.0075
THR 2330.0066
PRO 2340.0066
GLN 2350.0064
TYR 2360.0055
LEU 2370.0054
ASN 2380.0050
PRO 2390.0053
SER 2400.0047
VAL 2410.0049
ILE 2420.0056
SER 2430.0055
LEU 2440.0053
LEU 2450.0057
LYS 2460.0062
HIS 2470.0058
MET 2480.0058
LEU 2490.0064
GLN 2500.0064
VAL 2510.0069
ASP 2520.0064
PRO 2530.0061
MET 2540.0054
LYS 2550.0052
ARG 2560.0055
ALA 2570.0058
THR 2580.0056
ILE 2590.0055
LYS 2600.0049
ASP 2610.0050
ILE 2620.0048
ARG 2630.0042
GLU 2640.0041
HIS 2650.0043
GLU 2660.0039
TRP 2670.0040
PHE 2680.0039
LYS 2690.0034
GLN 2700.0033
ASP 2710.0029
LEU 2720.0033
PRO 2730.0028
LYS 2740.0019
TYR 2750.0030
LEU 2760.0037
PHE 2770.0035
PRO 2780.0031
GLU 2790.0024
ASP 2800.0035
ALA 3210.0205
VAL 3220.0178
ALA 3230.0144
TYR 3240.0182
HIS 3250.0167
LEU 3260.0136
ILE 3270.0153
ILE 3280.0171
ASP 3290.0156
ASN 3300.0152
ARG 3310.0157
ARG 3320.0157
ILE 3330.0155
MET 3340.0149
ASN 3350.0148
GLU 3360.0160
ALA 3370.0146
LYS 3380.0161
ASP 3390.0166
PHE 3400.0152
TYR 3410.0143
LEU 3420.0128
ALA 3430.0120
THR 3440.0126
SER 3450.0110
PRO 3460.0111
PRO 3470.0112
ASP 3480.0108
SER 3490.0104
PHE 3500.0104
LEU 3510.0100
ASP 3520.0106
ASP 3530.0141
HIS 3540.0189
HIS 3550.0183
LEU 3560.0234
THR 3570.0212
ARG 3580.0234
PRO 3590.0219
HIS 3600.0238
PRO 3610.0294
GLU 3620.0295
ARG 3630.0254
VAL 3640.0249
PRO 3650.0297
PHE 3660.0317
LEU 3670.0268
VAL 3680.0225
ALA 3690.0279
GLU 3700.0406
THR 3710.0427
PRO 3720.0420
ARG 3730.0547
ALA 3740.0628
ALA 3940.0076
LYS 3950.0065
TRP 3960.0057
HIS 3970.0065
LEU 3980.0055
GLY 3990.0045
ILE 4000.0067
ARG 4010.0091
SER 4020.0117
GLN 4030.0150
SER 4040.0156
ARG 4050.0156
PRO 4060.0131
ASN 4070.0145
ASP 4080.0160
ILE 4090.0130
MET 4100.0121
ALA 4110.0145
GLU 4120.0132
VAL 4130.0104
CYS 4140.0113
ARG 4150.0123
ALA 4160.0098
ILE 4170.0088
LYS 4180.0109
GLN 4190.0100
LEU 4200.0073
ASP 4210.0088
TYR 4220.0081
GLU 4230.0099
TRP 4240.0099
LYS 4250.0112
VAL 4260.0115
VAL 4270.0105
ASN 4280.0106
PRO 4290.0118
TYR 4300.0092
TYR 4310.0078
LEU 4320.0079
ARG 4330.0077
VAL 4340.0070
ARG 4350.0072
ARG 4360.0059
LYS 4370.0067
ASN 4380.0051
PRO 4390.0047
VAL 4400.0062
THR 4410.0087
SER 4420.0087
THR 4430.0087
PHE 4440.0080
SER 4450.0055
LYS 4460.0055
MET 4470.0038
SER 4480.0039
LEU 4490.0048
GLN 4500.0051
LEU 4510.0066
TYR 4520.0064
GLN 4530.0086
VAL 4540.0096
ASP 4550.0128
SER 4560.0144
ARG 4570.0153
THR 4580.0130
TYR 4590.0102
LEU 4600.0074
LEU 4610.0061
ASP 4620.0041
PHE 4630.0029
ARG 4640.0014
SER 4650.0013
ILE 4660.0045
ASP 4670.0084
ASP 4680.0138
GLU 4690.0414
ILE 4700.1975
LYS 2030.0118
SER 2040.0106
PRO 2050.0080
PRO 2060.0044
ILE 2070.0051
LEU 2080.0049
PRO 2090.0052
PRO 2100.0056
HIS 2110.0056
LEU 2120.0048
LEU 2130.0050
GLN 2140.0053
VAL 2150.0031
ILE 2160.0030
LEU 2170.0029
ASN 2180.0016
LYS 2190.0028
ASP 2200.0062
THR 2210.0094
ASN 2220.0126
ILE 2230.0161
SER 2240.0191
CYS 2250.0176
ASP 2260.0187
PRO 2270.0175
ALA 2280.0145
LEU 2290.0122
LEU 2300.0061
PRO 2310.0058
GLU 2320.0065
PRO 2330.0034
ASN 2340.0045
HIS 2350.0053
VAL 2360.0049
MET 2370.0043
LEU 2380.0043
ASN 2390.0033
HIS 2400.0035
LEU 2410.0039
TYR 2420.0050
ALA 2430.0060
LEU 2440.0071
SER 2450.0088
ILE 2460.0104
LYS 2470.0128
ASP 2480.0147
SER 2490.0126
VAL 2500.0106
MET 2510.0080
VAL 2520.0076
LEU 2530.0057
SER 2540.0048
ALA 2550.0042
THR 2560.0038
HIS 2570.0037
ARG 2580.0042
TYR 2590.0053
LYS 2600.0078
LYS 2610.0059
LYS 2620.0049
TYR 2630.0038
VAL 2640.0033
THR 2650.0029
THR 2660.0053
LEU 2670.0062
LEU 2680.0066
TYR 2690.0082
LYS 2700.0077
PRO 2710.0090
PRO 5280.0119
GLY 5290.0093
SER 5300.0083
HIS 5310.0064
THR 5320.0055
ILE 5330.0055
GLU 5340.0037
PHE 5350.0020
PHE 5360.0032
GLU 5370.0026
MET 5380.0012
CYS 5390.0029
ALA 5400.0044
ASN 5410.0041
LEU 5420.0057
ILE 5430.0067
LYS 5440.0077
ILE 5450.0092
LEU 5460.0100
ALA 5470.0108
GLN 5480.0131

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.