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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1619
ARG 100.0089
VAL 110.0086
LYS 120.0082
ILE 130.0077
GLY 140.0081
HIS 150.0076
TYR 160.0067
ILE 170.0072
LEU 180.0066
GLY 190.0064
ASP 200.0056
THR 210.0052
LEU 220.0040
GLY 230.0040
VAL 240.0039
GLY 250.0039
THR 260.0042
PHE 270.0050
GLY 280.0055
LYS 290.0052
VAL 300.0047
LYS 310.0051
VAL 320.0047
GLY 330.0053
LYS 340.0057
HIS 350.0061
GLU 360.0072
LEU 370.0070
THR 380.0057
GLY 390.0054
HIS 400.0043
LYS 410.0040
VAL 420.0041
ALA 430.0041
VAL 440.0050
LYS 450.0050
ILE 460.0061
LEU 470.0067
ASN 480.0078
ARG 490.0089
GLN 500.0091
LYS 510.0079
ILE 520.0076
ARG 530.0088
SER 540.0087
LEU 550.0081
ASP 560.0082
VAL 570.0071
VAL 580.0076
GLY 590.0073
LYS 600.0057
ILE 610.0050
ARG 620.0058
ARG 630.0053
GLU 640.0046
ILE 650.0047
GLN 660.0050
ASN 670.0042
LEU 680.0038
LYS 690.0043
LEU 700.0040
PHE 710.0034
ARG 720.0030
HIS 730.0025
PRO 740.0021
HIS 750.0022
ILE 760.0027
ILE 770.0028
LYS 780.0031
LEU 790.0040
TYR 800.0043
GLN 810.0052
VAL 820.0063
ILE 830.0073
SER 840.0085
THR 850.0097
PRO 860.0109
SER 870.0101
ASP 880.0085
ILE 890.0076
PHE 900.0066
MET 910.0053
VAL 920.0049
MET 930.0039
GLU 940.0033
TYR 950.0030
VAL 960.0022
SER 970.0023
GLY 980.0018
GLY 990.0027
GLU 1000.0033
LEU 1010.0033
PHE 1020.0037
ASP 1030.0041
TYR 1040.0039
ILE 1050.0043
CYS 1060.0048
LYS 1070.0047
ASN 1080.0047
GLY 1090.0050
ARG 1100.0048
LEU 1110.0043
ASP 1120.0044
GLU 1130.0042
LYS 1140.0039
GLU 1150.0037
SER 1160.0037
ARG 1170.0035
ARG 1180.0028
LEU 1190.0029
PHE 1200.0031
GLN 1210.0026
GLN 1220.0024
ILE 1230.0027
LEU 1240.0028
SER 1250.0024
GLY 1260.0026
VAL 1270.0030
ASP 1280.0030
TYR 1290.0030
CYS 1300.0032
HIS 1310.0034
ARG 1320.0033
HIS 1330.0035
MET 1340.0034
VAL 1350.0035
VAL 1360.0031
HIS 1370.0032
ARG 1380.0031
ASP 1390.0033
LEU 1400.0034
LYS 1410.0036
PRO 1420.0034
GLU 1430.0035
ASN 1440.0031
VAL 1450.0029
LEU 1460.0026
LEU 1470.0022
ASP 1480.0019
ALA 1490.0016
HIS 1500.0014
MET 1510.0021
ASN 1520.0021
ALA 1530.0024
LYS 1540.0023
ILE 1550.0027
ALA 1560.0028
ASP 1570.0029
PHE 1580.0032
GLY 1590.0034
LEU 1600.0034
SER 1610.0035
ASN 1620.0035
MET 1630.0029
MET 1640.0026
SER 1650.0023
ASP 1660.0026
GLY 1670.0025
GLU 1680.0016
PHE 1690.0015
LEU 1700.0015
ARG 1710.0021
SER 1730.0026
CYS 1740.0032
GLY 1750.0035
SER 1760.0041
PRO 1770.0045
ASN 1780.0044
TYR 1790.0038
ALA 1800.0034
ALA 1810.0031
PRO 1820.0026
GLU 1830.0019
VAL 1840.0024
ILE 1850.0033
SER 1860.0019
GLY 1870.0028
ARG 1880.0023
LEU 1890.0021
TYR 1900.0015
ALA 1910.0020
GLY 1920.0021
PRO 1930.0029
GLU 1940.0025
VAL 1950.0026
ASP 1960.0030
ILE 1970.0030
TRP 1980.0032
SER 1990.0034
SER 2000.0035
GLY 2010.0037
VAL 2020.0040
ILE 2030.0040
LEU 2040.0040
TYR 2050.0045
ALA 2060.0045
LEU 2070.0043
LEU 2080.0046
CYS 2090.0052
GLY 2100.0052
THR 2110.0053
LEU 2120.0052
PRO 2130.0050
PHE 2140.0050
ASP 2150.0057
ASP 2160.0066
ASP 2170.0074
HIS 2180.0072
VAL 2190.0063
PRO 2200.0059
THR 2210.0060
LEU 2220.0055
PHE 2230.0047
LYS 2240.0048
LYS 2250.0050
ILE 2260.0042
CYS 2270.0036
ASP 2280.0040
GLY 2290.0040
ILE 2300.0049
PHE 2310.0052
TYR 2320.0057
THR 2330.0055
PRO 2340.0061
GLN 2350.0064
TYR 2360.0059
LEU 2370.0054
ASN 2380.0052
PRO 2390.0052
SER 2400.0047
VAL 2410.0044
ILE 2420.0048
SER 2430.0044
LEU 2440.0040
LEU 2450.0042
LYS 2460.0042
HIS 2470.0036
MET 2480.0034
LEU 2490.0036
GLN 2500.0032
VAL 2510.0028
ASP 2520.0022
PRO 2530.0019
MET 2540.0022
LYS 2550.0025
ARG 2560.0026
ALA 2570.0030
THR 2580.0027
ILE 2590.0027
LYS 2600.0025
ASP 2610.0028
ILE 2620.0029
ARG 2630.0028
GLU 2640.0030
HIS 2650.0034
GLU 2660.0037
TRP 2670.0038
PHE 2680.0034
LYS 2690.0031
GLN 2700.0034
ASP 2710.0031
LEU 2720.0023
PRO 2730.0018
LYS 2740.0022
TYR 2750.0016
LEU 2760.0017
PHE 2770.0019
PRO 2780.0027
GLU 2790.0037
ASP 2800.0038
ALA 3210.0118
VAL 3220.0097
ALA 3230.0059
TYR 3240.0052
HIS 3250.0088
LEU 3260.0061
ILE 3270.0059
ILE 3280.0096
ASP 3290.0087
ASN 3300.0074
ARG 3310.0099
ARG 3320.0105
ILE 3330.0089
MET 3340.0100
ASN 3350.0117
GLU 3360.0116
ALA 3370.0124
LYS 3380.0156
ASP 3390.0175
PHE 3400.0160
TYR 3410.0146
LEU 3420.0129
ALA 3430.0109
THR 3440.0119
SER 3450.0088
PRO 3460.0056
PRO 3470.0083
ASP 3480.0157
SER 3490.0092
PHE 3500.0167
LEU 3510.0124
ASP 3520.0151
ASP 3530.0313
HIS 3540.0323
HIS 3550.0232
LEU 3560.0293
THR 3570.0191
ARG 3580.0230
PRO 3590.0212
HIS 3600.0253
PRO 3610.0342
GLU 3620.0352
ARG 3630.0285
VAL 3640.0278
PRO 3650.0366
PHE 3660.0394
LEU 3670.0299
VAL 3680.0240
ALA 3690.0340
GLU 3700.0529
THR 3710.0542
PRO 3720.0516
ARG 3730.0663
ALA 3740.0816
ALA 3940.0145
LYS 3950.0121
TRP 3960.0099
HIS 3970.0099
LEU 3980.0075
GLY 3990.0060
ILE 4000.0083
ARG 4010.0115
SER 4020.0145
GLN 4030.0190
SER 4040.0191
ARG 4050.0200
PRO 4060.0170
ASN 4070.0180
ASP 4080.0184
ILE 4090.0144
MET 4100.0131
ALA 4110.0149
GLU 4120.0121
VAL 4130.0088
CYS 4140.0097
ARG 4150.0094
ALA 4160.0059
ILE 4170.0056
LYS 4180.0078
GLN 4190.0048
LEU 4200.0035
ASP 4210.0071
TYR 4220.0075
GLU 4230.0105
TRP 4240.0102
LYS 4250.0128
VAL 4260.0137
VAL 4270.0141
ASN 4280.0145
PRO 4290.0153
TYR 4300.0120
TYR 4310.0099
LEU 4320.0090
ARG 4330.0088
VAL 4340.0073
ARG 4350.0087
ARG 4360.0086
LYS 4370.0116
ASN 4380.0121
PRO 4390.0134
VAL 4400.0165
THR 4410.0182
SER 4420.0169
THR 4430.0154
PHE 4440.0130
SER 4450.0093
LYS 4460.0076
MET 4470.0047
SER 4480.0043
LEU 4490.0043
GLN 4500.0062
LEU 4510.0087
TYR 4520.0096
GLN 4530.0128
VAL 4540.0136
ASP 4550.0180
SER 4560.0209
ARG 4570.0212
THR 4580.0176
TYR 4590.0138
LEU 4600.0097
LEU 4610.0071
ASP 4620.0043
PHE 4630.0021
ARG 4640.0017
SER 4650.0041
ILE 4660.0082
ASP 4670.0094
ASP 4680.0092
GLU 4690.0035
ILE 4700.1619
LYS 2030.0204
SER 2040.0176
PRO 2050.0131
PRO 2060.0091
ILE 2070.0090
LEU 2080.0070
PRO 2090.0043
PRO 2100.0053
HIS 2110.0047
LEU 2120.0049
LEU 2130.0063
GLN 2140.0066
VAL 2150.0055
ILE 2160.0055
LEU 2170.0065
ASN 2180.0048
LYS 2190.0031
ASP 2200.0026
THR 2210.0041
ASN 2220.0081
ILE 2230.0125
SER 2240.0176
CYS 2250.0168
ASP 2260.0194
PRO 2270.0176
ALA 2280.0148
LEU 2290.0112
LEU 2300.0056
PRO 2310.0061
GLU 2320.0068
PRO 2330.0047
ASN 2340.0041
HIS 2350.0034
VAL 2360.0031
MET 2370.0039
LEU 2380.0039
ASN 2390.0040
HIS 2400.0036
LEU 2410.0050
TYR 2420.0073
ALA 2430.0096
LEU 2440.0122
SER 2450.0146
ILE 2460.0158
LYS 2470.0198
ASP 2480.0219
SER 2490.0187
VAL 2500.0172
MET 2510.0132
VAL 2520.0127
LEU 2530.0095
SER 2540.0083
ALA 2550.0066
THR 2560.0061
HIS 2570.0062
ARG 2580.0057
TYR 2590.0064
LYS 2600.0062
LYS 2610.0049
LYS 2620.0049
TYR 2630.0056
VAL 2640.0067
THR 2650.0069
THR 2660.0105
LEU 2670.0116
LEU 2680.0125
TYR 2690.0151
LYS 2700.0144
PRO 2710.0161
PRO 5280.0216
GLY 5290.0177
SER 5300.0148
HIS 5310.0113
THR 5320.0096
ILE 5330.0105
GLU 5340.0097
PHE 5350.0068
PHE 5360.0074
GLU 5370.0081
MET 5380.0050
CYS 5390.0038
ALA 5400.0064
ASN 5410.0041
LEU 5420.0029
ILE 5430.0062
LYS 5440.0074
ILE 5450.0068
LEU 5460.0088
ALA 5470.0114
GLN 5480.0141

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.