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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0815
ARG 100.0191
VAL 110.0174
LYS 120.0140
ILE 130.0122
GLY 140.0118
HIS 150.0094
TYR 160.0088
ILE 170.0116
LEU 180.0126
GLY 190.0142
ASP 200.0147
THR 210.0142
LEU 220.0120
GLY 230.0112
VAL 240.0124
GLY 250.0103
THR 260.0096
PHE 270.0128
GLY 280.0131
LYS 290.0130
VAL 300.0105
LYS 310.0110
VAL 320.0096
GLY 330.0081
LYS 340.0086
HIS 350.0068
GLU 360.0085
LEU 370.0065
THR 380.0067
GLY 390.0084
HIS 400.0069
LYS 410.0073
VAL 420.0060
ALA 430.0065
VAL 440.0078
LYS 450.0086
ILE 460.0121
LEU 470.0141
ASN 480.0181
ARG 490.0210
GLN 500.0234
LYS 510.0205
ILE 520.0176
ARG 530.0215
SER 540.0229
LEU 550.0188
ASP 560.0172
VAL 570.0136
VAL 580.0158
GLY 590.0142
LYS 600.0088
ILE 610.0080
ARG 620.0109
ARG 630.0092
GLU 640.0066
ILE 650.0073
GLN 660.0090
ASN 670.0070
LEU 680.0060
LYS 690.0073
LEU 700.0073
PHE 710.0064
ARG 720.0065
HIS 730.0056
PRO 740.0055
HIS 750.0054
ILE 760.0055
ILE 770.0050
LYS 780.0052
LEU 790.0059
TYR 800.0066
GLN 810.0081
VAL 820.0109
ILE 830.0134
SER 840.0171
THR 850.0205
PRO 860.0247
SER 870.0233
ASP 880.0186
ILE 890.0151
PHE 900.0116
MET 910.0078
VAL 920.0064
MET 930.0049
GLU 940.0055
TYR 950.0065
VAL 960.0065
SER 970.0060
GLY 980.0048
GLY 990.0061
GLU 1000.0059
LEU 1010.0055
PHE 1020.0060
ASP 1030.0066
TYR 1040.0060
ILE 1050.0062
CYS 1060.0070
LYS 1070.0068
ASN 1080.0062
GLY 1090.0063
ARG 1100.0063
LEU 1110.0055
ASP 1120.0053
GLU 1130.0049
LYS 1140.0046
GLU 1150.0048
SER 1160.0052
ARG 1170.0047
ARG 1180.0044
LEU 1190.0049
PHE 1200.0050
GLN 1210.0046
GLN 1220.0048
ILE 1230.0053
LEU 1240.0053
SER 1250.0052
GLY 1260.0054
VAL 1270.0055
ASP 1280.0057
TYR 1290.0058
CYS 1300.0057
HIS 1310.0057
ARG 1320.0057
HIS 1330.0060
MET 1340.0053
VAL 1350.0059
VAL 1360.0057
HIS 1370.0055
ARG 1380.0053
ASP 1390.0054
LEU 1400.0056
LYS 1410.0058
PRO 1420.0052
GLU 1430.0057
ASN 1440.0054
VAL 1450.0054
LEU 1460.0053
LEU 1470.0050
ASP 1480.0053
ALA 1490.0059
HIS 1500.0057
MET 1510.0052
ASN 1520.0050
ALA 1530.0052
LYS 1540.0051
ILE 1550.0051
ALA 1560.0051
ASP 1570.0040
PHE 1580.0042
GLY 1590.0039
LEU 1600.0049
SER 1610.0055
ASN 1620.0060
MET 1630.0053
MET 1640.0046
SER 1650.0042
ASP 1660.0032
GLY 1670.0033
GLU 1680.0039
PHE 1690.0043
LEU 1700.0051
ARG 1710.0052
SER 1730.0060
CYS 1740.0063
GLY 1750.0063
SER 1760.0074
PRO 1770.0077
ASN 1780.0072
TYR 1790.0064
ALA 1800.0064
ALA 1810.0060
PRO 1820.0057
GLU 1830.0051
VAL 1840.0059
ILE 1850.0067
SER 1860.0053
GLY 1870.0057
ARG 1880.0040
LEU 1890.0042
TYR 1900.0042
ALA 1910.0044
GLY 1920.0051
PRO 1930.0053
GLU 1940.0049
VAL 1950.0054
ASP 1960.0056
ILE 1970.0053
TRP 1980.0057
SER 1990.0059
SER 2000.0057
GLY 2010.0057
VAL 2020.0062
ILE 2030.0062
LEU 2040.0057
TYR 2050.0063
ALA 2060.0065
LEU 2070.0060
LEU 2080.0060
CYS 2090.0068
GLY 2100.0071
THR 2110.0076
LEU 2120.0074
PRO 2130.0072
PHE 2140.0076
ASP 2150.0086
ASP 2160.0101
ASP 2170.0114
HIS 2180.0114
VAL 2190.0104
PRO 2200.0100
THR 2210.0098
LEU 2220.0090
PHE 2230.0082
LYS 2240.0082
LYS 2250.0081
ILE 2260.0071
CYS 2270.0067
ASP 2280.0068
GLY 2290.0064
ILE 2300.0071
PHE 2310.0072
TYR 2320.0074
THR 2330.0069
PRO 2340.0074
GLN 2350.0073
TYR 2360.0066
LEU 2370.0062
ASN 2380.0057
PRO 2390.0056
SER 2400.0050
VAL 2410.0052
ILE 2420.0057
SER 2430.0053
LEU 2440.0050
LEU 2450.0056
LYS 2460.0056
HIS 2470.0050
MET 2480.0051
LEU 2490.0056
GLN 2500.0052
VAL 2510.0054
ASP 2520.0044
PRO 2530.0042
MET 2540.0035
LYS 2550.0035
ARG 2560.0042
ALA 2570.0047
THR 2580.0045
ILE 2590.0047
LYS 2600.0037
ASP 2610.0040
ILE 2620.0044
ARG 2630.0040
GLU 2640.0038
HIS 2650.0041
GLU 2660.0041
TRP 2670.0044
PHE 2680.0043
LYS 2690.0039
GLN 2700.0038
ASP 2710.0035
LEU 2720.0045
PRO 2730.0038
LYS 2740.0022
TYR 2750.0033
LEU 2760.0040
PHE 2770.0033
PRO 2780.0061
GLU 2790.0063
ASP 2800.0054
ALA 3210.0764
VAL 3220.0479
ALA 3230.0419
TYR 3240.0454
HIS 3250.0280
LEU 3260.0288
ILE 3270.0450
ILE 3280.0460
ASP 3290.0398
ASN 3300.0460
ARG 3310.0439
ARG 3320.0432
ILE 3330.0467
MET 3340.0399
ASN 3350.0350
GLU 3360.0419
ALA 3370.0389
LYS 3380.0292
ASP 3390.0264
PHE 3400.0264
TYR 3410.0225
LEU 3420.0181
ALA 3430.0152
THR 3440.0213
SER 3450.0268
PRO 3460.0261
PRO 3470.0339
ASP 3480.0504
SER 3490.0333
PHE 3500.0503
LEU 3510.0399
ASP 3520.0432
ASP 3530.0801
HIS 3540.0676
HIS 3550.0382
LEU 3560.0313
THR 3570.0164
ARG 3580.0157
PRO 3590.0126
HIS 3600.0147
PRO 3610.0203
GLU 3620.0226
ARG 3630.0161
VAL 3640.0140
PRO 3650.0250
PHE 3660.0318
LEU 3670.0208
VAL 3680.0147
ALA 3690.0294
GLU 3700.0535
THR 3710.0530
PRO 3720.0435
ARG 3730.0513
ALA 3740.0815
ALA 3940.0125
LYS 3950.0112
TRP 3960.0091
HIS 3970.0084
LEU 3980.0063
GLY 3990.0043
ILE 4000.0056
ARG 4010.0081
SER 4020.0105
GLN 4030.0141
SER 4040.0147
ARG 4050.0157
PRO 4060.0136
ASN 4070.0149
ASP 4080.0153
ILE 4090.0121
MET 4100.0117
ALA 4110.0134
GLU 4120.0111
VAL 4130.0088
CYS 4140.0102
ARG 4150.0100
ALA 4160.0073
ILE 4170.0076
LYS 4180.0096
GLN 4190.0076
LEU 4200.0065
ASP 4210.0091
TYR 4220.0089
GLU 4230.0109
TRP 4240.0106
LYS 4250.0122
VAL 4260.0125
VAL 4270.0123
ASN 4280.0124
PRO 4290.0132
TYR 4300.0105
TYR 4310.0091
LEU 4320.0089
ARG 4330.0088
VAL 4340.0080
ARG 4350.0089
ARG 4360.0086
LYS 4370.0106
ASN 4380.0101
PRO 4390.0111
VAL 4400.0128
THR 4410.0142
SER 4420.0139
THR 4430.0128
PHE 4440.0113
SER 4450.0082
LYS 4460.0072
MET 4470.0051
SER 4480.0051
LEU 4490.0052
GLN 4500.0061
LEU 4510.0075
TYR 4520.0074
GLN 4530.0095
VAL 4540.0098
ASP 4550.0131
SER 4560.0155
ARG 4570.0158
THR 4580.0129
TYR 4590.0103
LEU 4600.0072
LEU 4610.0057
ASP 4620.0041
PHE 4630.0029
ARG 4640.0026
SER 4650.0032
ILE 4660.0060
ASP 4670.0080
ASP 4680.0104
GLU 4690.0137
ILE 4700.0366
LYS 2030.0159
SER 2040.0137
PRO 2050.0102
PRO 2060.0067
ILE 2070.0062
LEU 2080.0050
PRO 2090.0038
PRO 2100.0039
HIS 2110.0039
LEU 2120.0043
LEU 2130.0043
GLN 2140.0048
VAL 2150.0063
ILE 2160.0061
LEU 2170.0067
ASN 2180.0093
LYS 2190.0105
ASP 2200.0126
THR 2210.0131
ASN 2220.0150
ILE 2230.0115
SER 2240.0154
CYS 2250.0145
ASP 2260.0137
PRO 2270.0112
ALA 2280.0123
LEU 2290.0101
LEU 2300.0066
PRO 2310.0082
GLU 2320.0076
PRO 2330.0030
ASN 2340.0025
HIS 2350.0033
VAL 2360.0033
MET 2370.0034
LEU 2380.0033
ASN 2390.0031
HIS 2400.0034
LEU 2410.0040
TYR 2420.0060
ALA 2430.0076
LEU 2440.0095
SER 2450.0117
ILE 2460.0124
LYS 2470.0144
ASP 2480.0158
SER 2490.0139
VAL 2500.0125
MET 2510.0097
VAL 2520.0092
LEU 2530.0069
SER 2540.0062
ALA 2550.0045
THR 2560.0032
HIS 2570.0020
ARG 2580.0040
TYR 2590.0082
LYS 2600.0128
LYS 2610.0098
LYS 2620.0105
TYR 2630.0043
VAL 2640.0031
THR 2650.0032
THR 2660.0059
LEU 2670.0075
LEU 2680.0085
TYR 2690.0104
LYS 2700.0101
PRO 2710.0117
PRO 5280.0159
GLY 5290.0129
SER 5300.0109
HIS 5310.0082
THR 5320.0066
ILE 5330.0070
GLU 5340.0069
PHE 5350.0047
PHE 5360.0047
GLU 5370.0053
MET 5380.0039
CYS 5390.0028
ALA 5400.0038
ASN 5410.0029
LEU 5420.0034
ILE 5430.0042
LYS 5440.0043
ILE 5450.0054
LEU 5460.0069
ALA 5470.0079
GLN 5480.0095

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.