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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0789
ARG 100.0069
VAL 110.0093
LYS 120.0101
ILE 130.0155
GLY 140.0234
HIS 150.0222
TYR 160.0135
ILE 170.0084
LEU 180.0059
GLY 190.0134
ASP 200.0198
THR 210.0206
LEU 220.0213
GLY 230.0224
VAL 240.0284
GLY 250.0254
THR 260.0285
PHE 270.0329
GLY 280.0272
LYS 290.0229
VAL 300.0162
LYS 310.0130
VAL 320.0121
GLY 330.0088
LYS 340.0168
HIS 350.0225
GLU 360.0248
LEU 370.0350
THR 380.0368
GLY 390.0304
HIS 400.0252
LYS 410.0190
VAL 420.0113
ALA 430.0078
VAL 440.0058
LYS 450.0112
ILE 460.0179
LEU 470.0262
ASN 480.0336
ARG 490.0423
GLN 500.0482
LYS 510.0465
ILE 520.0426
ARG 530.0524
SER 540.0609
LEU 550.0528
ASP 560.0440
VAL 570.0323
VAL 580.0298
GLY 590.0204
LYS 600.0161
ILE 610.0157
ARG 620.0139
ARG 630.0072
GLU 640.0071
ILE 650.0065
GLN 660.0063
ASN 670.0046
LEU 680.0045
LYS 690.0047
LEU 700.0054
PHE 710.0051
ARG 720.0057
HIS 730.0073
PRO 740.0066
HIS 750.0051
ILE 760.0055
ILE 770.0057
LYS 780.0064
LEU 790.0066
TYR 800.0107
GLN 810.0130
VAL 820.0162
ILE 830.0223
SER 840.0298
THR 850.0347
PRO 860.0433
SER 870.0393
ASP 880.0309
ILE 890.0251
PHE 900.0159
MET 910.0100
VAL 920.0064
MET 930.0052
GLU 940.0099
TYR 950.0131
VAL 960.0142
SER 970.0124
GLY 980.0106
GLY 990.0111
GLU 1000.0079
LEU 1010.0065
PHE 1020.0088
ASP 1030.0114
TYR 1040.0091
ILE 1050.0115
CYS 1060.0155
LYS 1070.0138
ASN 1080.0130
GLY 1090.0153
ARG 1100.0140
LEU 1110.0116
ASP 1120.0135
GLU 1130.0141
LYS 1140.0123
GLU 1150.0088
SER 1160.0089
ARG 1170.0096
ARG 1180.0070
LEU 1190.0043
PHE 1200.0058
GLN 1210.0070
GLN 1220.0052
ILE 1230.0034
LEU 1240.0052
SER 1250.0065
GLY 1260.0057
VAL 1270.0053
ASP 1280.0068
TYR 1290.0067
CYS 1300.0068
HIS 1310.0072
ARG 1320.0089
HIS 1330.0074
MET 1340.0070
VAL 1350.0066
VAL 1360.0064
HIS 1370.0058
ARG 1380.0053
ASP 1390.0033
LEU 1400.0032
LYS 1410.0038
PRO 1420.0043
GLU 1430.0058
ASN 1440.0052
VAL 1450.0048
LEU 1460.0065
LEU 1470.0064
ASP 1480.0090
ALA 1490.0100
HIS 1500.0071
MET 1510.0045
ASN 1520.0043
ALA 1530.0037
LYS 1540.0056
ILE 1550.0052
ALA 1560.0058
ASP 1570.0074
PHE 1580.0064
GLY 1590.0074
LEU 1600.0061
SER 1610.0065
ASN 1620.0066
MET 1630.0064
MET 1640.0065
SER 1650.0067
ASP 1660.0064
GLY 1670.0064
GLU 1680.0065
PHE 1690.0074
LEU 1700.0072
ARG 1710.0067
SER 1730.0047
CYS 1740.0052
GLY 1750.0031
SER 1760.0075
PRO 1770.0093
ASN 1780.0079
TYR 1790.0047
ALA 1800.0040
ALA 1810.0031
PRO 1820.0035
GLU 1830.0018
VAL 1840.0033
ILE 1850.0057
SER 1860.0044
GLY 1870.0060
ARG 1880.0055
LEU 1890.0063
TYR 1900.0060
ALA 1910.0071
GLY 1920.0063
PRO 1930.0059
GLU 1940.0046
VAL 1950.0028
ASP 1960.0036
ILE 1970.0048
TRP 1980.0040
SER 1990.0026
SER 2000.0040
GLY 2010.0070
VAL 2020.0072
ILE 2030.0060
LEU 2040.0084
TYR 2050.0112
ALA 2060.0110
LEU 2070.0098
LEU 2080.0132
CYS 2090.0158
GLY 2100.0148
THR 2110.0156
LEU 2120.0129
PRO 2130.0134
PHE 2140.0131
ASP 2150.0155
ASP 2160.0197
ASP 2170.0231
HIS 2180.0233
VAL 2190.0190
PRO 2200.0183
THR 2210.0189
LEU 2220.0158
PHE 2230.0122
LYS 2240.0138
LYS 2250.0147
ILE 2260.0104
CYS 2270.0091
ASP 2280.0122
GLY 2290.0121
ILE 2300.0160
PHE 2310.0167
TYR 2320.0199
THR 2330.0201
PRO 2340.0235
GLN 2350.0264
TYR 2360.0235
LEU 2370.0208
ASN 2380.0214
PRO 2390.0224
SER 2400.0204
VAL 2410.0167
ILE 2420.0177
SER 2430.0180
LEU 2440.0145
LEU 2450.0125
LYS 2460.0139
HIS 2470.0127
MET 2480.0089
LEU 2490.0083
GLN 2500.0085
VAL 2510.0058
ASP 2520.0052
PRO 2530.0042
MET 2540.0057
LYS 2550.0082
ARG 2560.0081
ALA 2570.0105
THR 2580.0102
ILE 2590.0100
LYS 2600.0134
ASP 2610.0136
ILE 2620.0123
ARG 2630.0140
GLU 2640.0171
HIS 2650.0165
GLU 2660.0191
TRP 2670.0167
PHE 2680.0140
LYS 2690.0163
GLN 2700.0164
ASP 2710.0149
LEU 2720.0118
PRO 2730.0115
LYS 2740.0143
TYR 2750.0130
LEU 2760.0109
PHE 2770.0127
PRO 2780.0144
GLU 2790.0154
ASP 2800.0173
ALA 3210.0259
VAL 3220.0100
ALA 3230.0087
TYR 3240.0081
HIS 3250.0079
LEU 3260.0056
ILE 3270.0023
ILE 3280.0083
ASP 3290.0094
ASN 3300.0060
ARG 3310.0051
ARG 3320.0052
ILE 3330.0045
MET 3340.0050
ASN 3350.0067
GLU 3360.0080
ALA 3370.0120
LYS 3380.0141
ASP 3390.0175
PHE 3400.0164
TYR 3410.0157
LEU 3420.0172
ALA 3430.0159
THR 3440.0159
SER 3450.0159
PRO 3460.0124
PRO 3470.0123
ASP 3480.0181
SER 3490.0181
PHE 3500.0199
LEU 3510.0219
ASP 3520.0179
ASP 3530.0175
HIS 3540.0121
HIS 3550.0076
LEU 3560.0042
THR 3570.0050
ARG 3580.0067
PRO 3590.0078
HIS 3600.0110
PRO 3610.0119
GLU 3620.0131
ARG 3630.0104
VAL 3640.0084
PRO 3650.0101
PHE 3660.0084
LEU 3670.0059
VAL 3680.0066
ALA 3690.0091
GLU 3700.0081
THR 3710.0077
PRO 3720.0090
ARG 3730.0131
ALA 3740.0143
ALA 3940.0080
LYS 3950.0078
TRP 3960.0073
HIS 3970.0062
LEU 3980.0062
GLY 3990.0051
ILE 4000.0049
ARG 4010.0050
SER 4020.0048
GLN 4030.0052
SER 4040.0056
ARG 4050.0071
PRO 4060.0071
ASN 4070.0080
ASP 4080.0073
ILE 4090.0059
MET 4100.0063
ALA 4110.0073
GLU 4120.0061
VAL 4130.0047
CYS 4140.0055
ARG 4150.0062
ALA 4160.0050
ILE 4170.0043
LYS 4180.0057
GLN 4190.0064
LEU 4200.0055
ASP 4210.0054
TYR 4220.0037
GLU 4230.0033
TRP 4240.0042
LYS 4250.0058
VAL 4260.0075
VAL 4270.0085
ASN 4280.0092
PRO 4290.0089
TYR 4300.0076
TYR 4310.0071
LEU 4320.0060
ARG 4330.0056
VAL 4340.0036
ARG 4350.0033
ARG 4360.0038
LYS 4370.0062
ASN 4380.0086
PRO 4390.0111
VAL 4400.0138
THR 4410.0139
SER 4420.0111
THR 4430.0103
PHE 4440.0077
SER 4450.0066
LYS 4460.0057
MET 4470.0057
SER 4480.0056
LEU 4490.0054
GLN 4500.0067
LEU 4510.0063
TYR 4520.0070
GLN 4530.0072
VAL 4540.0076
ASP 4550.0077
SER 4560.0081
ARG 4570.0069
THR 4580.0062
TYR 4590.0061
LEU 4600.0060
LEU 4610.0053
ASP 4620.0058
PHE 4630.0055
ARG 4640.0064
SER 4650.0065
ILE 4660.0088
ASP 4670.0131
ASP 4680.0160
GLU 4690.0789
ILE 4700.0544
LYS 2030.0091
SER 2040.0086
PRO 2050.0077
PRO 2060.0078
ILE 2070.0078
LEU 2080.0077
PRO 2090.0076
PRO 2100.0075
HIS 2110.0075
LEU 2120.0075
LEU 2130.0079
GLN 2140.0078
VAL 2150.0092
ILE 2160.0105
LEU 2170.0097
ASN 2180.0095
LYS 2190.0109
ASP 2200.0116
THR 2210.0125
ASN 2220.0114
ILE 2230.0093
SER 2240.0112
CYS 2250.0135
ASP 2260.0146
PRO 2270.0127
ALA 2280.0150
LEU 2290.0160
LEU 2300.0149
PRO 2310.0149
GLU 2320.0141
PRO 2330.0109
ASN 2340.0099
HIS 2350.0074
VAL 2360.0078
MET 2370.0077
LEU 2380.0067
ASN 2390.0067
HIS 2400.0064
LEU 2410.0059
TYR 2420.0060
ALA 2430.0056
LEU 2440.0061
SER 2450.0049
ILE 2460.0047
LYS 2470.0063
ASP 2480.0082
SER 2490.0079
VAL 2500.0075
MET 2510.0059
VAL 2520.0066
LEU 2530.0062
SER 2540.0073
ALA 2550.0075
THR 2560.0086
HIS 2570.0086
ARG 2580.0087
TYR 2590.0088
LYS 2600.0087
LYS 2610.0099
LYS 2620.0110
TYR 2630.0108
VAL 2640.0107
THR 2650.0103
THR 2660.0097
LEU 2670.0088
LEU 2680.0080
TYR 2690.0085
LYS 2700.0078
PRO 2710.0079
PRO 5280.0183
GLY 5290.0146
SER 5300.0127
HIS 5310.0101
THR 5320.0093
ILE 5330.0085
GLU 5340.0075
PHE 5350.0062
PHE 5360.0055
GLU 5370.0060
MET 5380.0044
CYS 5390.0037
ALA 5400.0047
ASN 5410.0046
LEU 5420.0035
ILE 5430.0035
LYS 5440.0048
ILE 5450.0049
LEU 5460.0040
ALA 5470.0038
GLN 5480.0048

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.