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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0805
ARG 100.0470
VAL 110.0402
LYS 120.0349
ILE 130.0276
GLY 140.0336
HIS 150.0337
TYR 160.0250
ILE 170.0303
LEU 180.0279
GLY 190.0304
ASP 200.0319
THR 210.0310
LEU 220.0273
GLY 230.0244
VAL 240.0263
GLY 250.0175
THR 260.0184
PHE 270.0203
GLY 280.0190
LYS 290.0220
VAL 300.0187
LYS 310.0218
VAL 320.0178
GLY 330.0160
LYS 340.0196
HIS 350.0236
GLU 360.0339
LEU 370.0367
THR 380.0268
GLY 390.0197
HIS 400.0122
LYS 410.0065
VAL 420.0051
ALA 430.0102
VAL 440.0104
LYS 450.0111
ILE 460.0156
LEU 470.0146
ASN 480.0178
ARG 490.0158
GLN 500.0211
LYS 510.0214
ILE 520.0162
ARG 530.0149
SER 540.0213
LEU 550.0211
ASP 560.0181
VAL 570.0161
VAL 580.0104
GLY 590.0122
LYS 600.0139
ILE 610.0104
ARG 620.0099
ARG 630.0116
GLU 640.0112
ILE 650.0097
GLN 660.0107
ASN 670.0113
LEU 680.0105
LYS 690.0096
LEU 700.0103
PHE 710.0111
ARG 720.0115
HIS 730.0137
PRO 740.0148
HIS 750.0132
ILE 760.0126
ILE 770.0118
LYS 780.0109
LEU 790.0071
TYR 800.0043
GLN 810.0039
VAL 820.0047
ILE 830.0108
SER 840.0123
THR 850.0181
PRO 860.0196
SER 870.0207
ASP 880.0169
ILE 890.0109
PHE 900.0106
MET 910.0051
VAL 920.0038
MET 930.0048
GLU 940.0076
TYR 950.0091
VAL 960.0135
SER 970.0202
GLY 980.0198
GLY 990.0176
GLU 1000.0157
LEU 1010.0132
PHE 1020.0132
ASP 1030.0167
TYR 1040.0148
ILE 1050.0130
CYS 1060.0172
LYS 1070.0184
ASN 1080.0153
GLY 1090.0116
ARG 1100.0089
LEU 1110.0069
ASP 1120.0057
GLU 1130.0061
LYS 1140.0098
GLU 1150.0096
SER 1160.0065
ARG 1170.0076
ARG 1180.0111
LEU 1190.0102
PHE 1200.0071
GLN 1210.0100
GLN 1220.0119
ILE 1230.0096
LEU 1240.0078
SER 1250.0105
GLY 1260.0106
VAL 1270.0081
ASP 1280.0086
TYR 1290.0101
CYS 1300.0095
HIS 1310.0076
ARG 1320.0096
HIS 1330.0099
MET 1340.0085
VAL 1350.0088
VAL 1360.0081
HIS 1370.0090
ARG 1380.0085
ASP 1390.0102
LEU 1400.0090
LYS 1410.0107
PRO 1420.0103
GLU 1430.0138
ASN 1440.0131
VAL 1450.0123
LEU 1460.0150
LEU 1470.0167
ASP 1480.0190
ALA 1490.0223
HIS 1500.0218
MET 1510.0180
ASN 1520.0166
ALA 1530.0138
LYS 1540.0136
ILE 1550.0123
ALA 1560.0127
ASP 1570.0126
PHE 1580.0125
GLY 1590.0127
LEU 1600.0116
SER 1610.0112
ASN 1620.0110
MET 1630.0098
MET 1640.0070
SER 1650.0071
ASP 1660.0051
GLY 1670.0044
GLU 1680.0035
PHE 1690.0032
LEU 1700.0049
ARG 1710.0060
SER 1730.0112
CYS 1740.0132
GLY 1750.0120
SER 1760.0181
PRO 1770.0206
ASN 1780.0175
TYR 1790.0109
ALA 1800.0116
ALA 1810.0102
PRO 1820.0135
GLU 1830.0104
VAL 1840.0106
ILE 1850.0159
SER 1860.0148
GLY 1870.0114
ARG 1880.0063
LEU 1890.0031
TYR 1900.0016
ALA 1910.0019
GLY 1920.0029
PRO 1930.0025
GLU 1940.0029
VAL 1950.0037
ASP 1960.0034
ILE 1970.0032
TRP 1980.0060
SER 1990.0061
SER 2000.0036
GLY 2010.0052
VAL 2020.0080
ILE 2030.0066
LEU 2040.0039
TYR 2050.0075
ALA 2060.0087
LEU 2070.0061
LEU 2080.0047
CYS 2090.0089
GLY 2100.0112
THR 2110.0144
LEU 2120.0160
PRO 2130.0166
PHE 2140.0205
ASP 2150.0263
ASP 2160.0350
ASP 2170.0418
HIS 2180.0436
VAL 2190.0370
PRO 2200.0374
THR 2210.0378
LEU 2220.0311
PHE 2230.0267
LYS 2240.0306
LYS 2250.0289
ILE 2260.0220
CYS 2270.0229
ASP 2280.0265
GLY 2290.0228
ILE 2300.0248
PHE 2310.0210
TYR 2320.0207
THR 2330.0158
PRO 2340.0162
GLN 2350.0152
TYR 2360.0101
LEU 2370.0099
ASN 2380.0110
PRO 2390.0147
SER 2400.0140
VAL 2410.0101
ILE 2420.0127
SER 2430.0152
LEU 2440.0113
LEU 2450.0104
LYS 2460.0149
HIS 2470.0133
MET 2480.0092
LEU 2490.0115
GLN 2500.0145
VAL 2510.0159
ASP 2520.0154
PRO 2530.0105
MET 2540.0117
LYS 2550.0155
ARG 2560.0120
ALA 2570.0101
THR 2580.0097
ILE 2590.0094
LYS 2600.0140
ASP 2610.0136
ILE 2620.0109
ARG 2630.0133
GLU 2640.0168
HIS 2650.0149
GLU 2660.0169
TRP 2670.0128
PHE 2680.0118
LYS 2690.0163
GLN 2700.0157
ASP 2710.0176
LEU 2720.0168
PRO 2730.0186
LYS 2740.0198
TYR 2750.0190
LEU 2760.0160
PHE 2770.0156
PRO 2780.0145
GLU 2790.0174
ASP 2800.0178
ALA 3210.0249
VAL 3220.0160
ALA 3230.0164
TYR 3240.0158
HIS 3250.0104
LEU 3260.0128
ILE 3270.0176
ILE 3280.0164
ASP 3290.0149
ASN 3300.0182
ARG 3310.0164
ARG 3320.0169
ILE 3330.0210
MET 3340.0188
ASN 3350.0179
GLU 3360.0224
ALA 3370.0199
LYS 3380.0154
ASP 3390.0129
PHE 3400.0123
TYR 3410.0107
LEU 3420.0087
ALA 3430.0076
THR 3440.0099
SER 3450.0108
PRO 3460.0107
PRO 3470.0120
ASP 3480.0133
SER 3490.0102
PHE 3500.0142
LEU 3510.0134
ASP 3520.0110
ASP 3530.0162
HIS 3540.0103
HIS 3550.0077
LEU 3560.0060
THR 3570.0122
ARG 3580.0126
PRO 3590.0120
HIS 3600.0112
PRO 3610.0143
GLU 3620.0138
ARG 3630.0132
VAL 3640.0144
PRO 3650.0170
PHE 3660.0157
LEU 3670.0116
VAL 3680.0103
ALA 3690.0120
GLU 3700.0145
THR 3710.0131
PRO 3720.0121
ARG 3730.0199
ALA 3740.0246
ALA 3940.0054
LYS 3950.0053
TRP 3960.0050
HIS 3970.0053
LEU 3980.0047
GLY 3990.0049
ILE 4000.0038
ARG 4010.0035
SER 4020.0033
GLN 4030.0034
SER 4040.0027
ARG 4050.0024
PRO 4060.0025
ASN 4070.0026
ASP 4080.0024
ILE 4090.0024
MET 4100.0031
ALA 4110.0035
GLU 4120.0037
VAL 4130.0035
CYS 4140.0048
ARG 4150.0053
ALA 4160.0046
ILE 4170.0053
LYS 4180.0067
GLN 4190.0065
LEU 4200.0063
ASP 4210.0076
TYR 4220.0071
GLU 4230.0081
TRP 4240.0068
LYS 4250.0072
VAL 4260.0063
VAL 4270.0065
ASN 4280.0053
PRO 4290.0040
TYR 4300.0036
TYR 4310.0045
LEU 4320.0049
ARG 4330.0064
VAL 4340.0060
ARG 4350.0076
ARG 4360.0078
LYS 4370.0102
ASN 4380.0096
PRO 4390.0114
VAL 4400.0120
THR 4410.0128
SER 4420.0133
THR 4430.0123
PHE 4440.0114
SER 4450.0084
LYS 4460.0075
MET 4470.0058
SER 4480.0049
LEU 4490.0038
GLN 4500.0038
LEU 4510.0029
TYR 4520.0030
GLN 4530.0033
VAL 4540.0037
ASP 4550.0038
SER 4560.0036
ARG 4570.0036
THR 4580.0035
TYR 4590.0032
LEU 4600.0035
LEU 4610.0035
ASP 4620.0038
PHE 4630.0044
ARG 4640.0051
SER 4650.0056
ILE 4660.0077
ASP 4670.0127
ASP 4680.0184
GLU 4690.0805
ILE 4700.0742
LYS 2030.0032
SER 2040.0030
PRO 2050.0030
PRO 2060.0021
ILE 2070.0029
LEU 2080.0031
PRO 2090.0015
PRO 2100.0031
HIS 2110.0032
LEU 2120.0037
LEU 2130.0040
GLN 2140.0048
VAL 2150.0043
ILE 2160.0035
LEU 2170.0037
ASN 2180.0052
LYS 2190.0047
ASP 2200.0055
THR 2210.0064
ASN 2220.0080
ILE 2230.0089
SER 2240.0093
CYS 2250.0075
ASP 2260.0064
PRO 2270.0078
ALA 2280.0057
LEU 2290.0052
LEU 2300.0041
PRO 2310.0051
GLU 2320.0042
PRO 2330.0040
ASN 2340.0037
HIS 2350.0039
VAL 2360.0039
MET 2370.0046
LEU 2380.0051
ASN 2390.0054
HIS 2400.0049
LEU 2410.0049
TYR 2420.0049
ALA 2430.0052
LEU 2440.0053
SER 2450.0056
ILE 2460.0063
LYS 2470.0068
ASP 2480.0083
SER 2490.0080
VAL 2500.0066
MET 2510.0052
VAL 2520.0050
LEU 2530.0043
SER 2540.0049
ALA 2550.0048
THR 2560.0046
HIS 2570.0047
ARG 2580.0038
TYR 2590.0040
LYS 2600.0042
LYS 2610.0050
LYS 2620.0049
TYR 2630.0035
VAL 2640.0036
THR 2650.0040
THR 2660.0049
LEU 2670.0047
LEU 2680.0046
TYR 2690.0052
LYS 2700.0051
PRO 2710.0064
PRO 5280.0124
GLY 5290.0088
SER 5300.0074
HIS 5310.0069
THR 5320.0057
ILE 5330.0039
GLU 5340.0050
PHE 5350.0047
PHE 5360.0032
GLU 5370.0031
MET 5380.0037
CYS 5390.0029
ALA 5400.0026
ASN 5410.0031
LEU 5420.0031
ILE 5430.0024
LYS 5440.0027
ILE 5450.0035
LEU 5460.0029
ALA 5470.0029
GLN 5480.0040

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.