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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1701
ARG 100.0167
VAL 110.0143
LYS 120.0121
ILE 130.0093
GLY 140.0096
HIS 150.0107
TYR 160.0094
ILE 170.0115
LEU 180.0114
GLY 190.0116
ASP 200.0119
THR 210.0121
LEU 220.0112
GLY 230.0108
VAL 240.0114
GLY 250.0089
THR 260.0094
PHE 270.0109
GLY 280.0104
LYS 290.0105
VAL 300.0094
LYS 310.0099
VAL 320.0086
GLY 330.0078
LYS 340.0092
HIS 350.0096
GLU 360.0127
LEU 370.0134
THR 380.0113
GLY 390.0099
HIS 400.0071
LYS 410.0058
VAL 420.0051
ALA 430.0063
VAL 440.0067
LYS 450.0073
ILE 460.0090
LEU 470.0098
ASN 480.0108
ARG 490.0119
GLN 500.0135
LYS 510.0134
ILE 520.0121
ARG 530.0132
SER 540.0151
LEU 550.0146
ASP 560.0139
VAL 570.0115
VAL 580.0107
GLY 590.0097
LYS 600.0077
ILE 610.0065
ARG 620.0073
ARG 630.0061
GLU 640.0056
ILE 650.0053
GLN 660.0056
ASN 670.0043
LEU 680.0044
LYS 690.0047
LEU 700.0048
PHE 710.0047
ARG 720.0049
HIS 730.0059
PRO 740.0064
HIS 750.0060
ILE 760.0051
ILE 770.0049
LYS 780.0047
LEU 790.0040
TYR 800.0027
GLN 810.0033
VAL 820.0046
ILE 830.0054
SER 840.0072
THR 850.0089
PRO 860.0106
SER 870.0115
ASP 880.0102
ILE 890.0085
PHE 900.0073
MET 910.0055
VAL 920.0046
MET 930.0043
GLU 940.0042
TYR 950.0045
VAL 960.0045
SER 970.0073
GLY 980.0083
GLY 990.0073
GLU 1000.0070
LEU 1010.0070
PHE 1020.0067
ASP 1030.0082
TYR 1040.0084
ILE 1050.0077
CYS 1060.0089
LYS 1070.0101
ASN 1080.0100
GLY 1090.0086
ARG 1100.0071
LEU 1110.0075
ASP 1120.0077
GLU 1130.0073
LYS 1140.0088
GLU 1150.0082
SER 1160.0064
ARG 1170.0066
ARG 1180.0071
LEU 1190.0065
PHE 1200.0055
GLN 1210.0060
GLN 1220.0064
ILE 1230.0053
LEU 1240.0050
SER 1250.0058
GLY 1260.0053
VAL 1270.0044
ASP 1280.0046
TYR 1290.0048
CYS 1300.0040
HIS 1310.0036
ARG 1320.0041
HIS 1330.0033
MET 1340.0020
VAL 1350.0023
VAL 1360.0021
HIS 1370.0026
ARG 1380.0022
ASP 1390.0030
LEU 1400.0032
LYS 1410.0039
PRO 1420.0049
GLU 1430.0054
ASN 1440.0047
VAL 1450.0056
LEU 1460.0063
LEU 1470.0072
ASP 1480.0077
ALA 1490.0089
HIS 1500.0089
MET 1510.0084
ASN 1520.0076
ALA 1530.0065
LYS 1540.0058
ILE 1550.0051
ALA 1560.0048
ASP 1570.0040
PHE 1580.0042
GLY 1590.0044
LEU 1600.0029
SER 1610.0029
ASN 1620.0027
MET 1630.0022
MET 1640.0013
SER 1650.0030
ASP 1660.0052
GLY 1670.0054
GLU 1680.0052
PHE 1690.0041
LEU 1700.0036
ARG 1710.0037
SER 1730.0032
CYS 1740.0032
GLY 1750.0026
SER 1760.0044
PRO 1770.0053
ASN 1780.0040
TYR 1790.0023
ALA 1800.0022
ALA 1810.0019
PRO 1820.0036
GLU 1830.0039
VAL 1840.0034
ILE 1850.0044
SER 1860.0052
GLY 1870.0048
ARG 1880.0047
LEU 1890.0044
TYR 1900.0035
ALA 1910.0039
GLY 1920.0018
PRO 1930.0018
GLU 1940.0023
VAL 1950.0008
ASP 1960.0012
ILE 1970.0019
TRP 1980.0007
SER 1990.0013
SER 2000.0025
GLY 2010.0019
VAL 2020.0018
ILE 2030.0033
LEU 2040.0038
TYR 2050.0030
ALA 2060.0042
LEU 2070.0053
LEU 2080.0050
CYS 2090.0047
GLY 2100.0057
THR 2110.0048
LEU 2120.0039
PRO 2130.0022
PHE 2140.0035
ASP 2150.0059
ASP 2160.0081
ASP 2170.0104
HIS 2180.0111
VAL 2190.0096
PRO 2200.0101
THR 2210.0093
LEU 2220.0073
PHE 2230.0066
LYS 2240.0074
LYS 2250.0058
ILE 2260.0044
CYS 2270.0055
ASP 2280.0057
GLY 2290.0043
ILE 2300.0035
PHE 2310.0016
TYR 2320.0005
THR 2330.0016
PRO 2340.0024
GLN 2350.0037
TYR 2360.0051
LEU 2370.0045
ASN 2380.0058
PRO 2390.0056
SER 2400.0064
VAL 2410.0051
ILE 2420.0039
SER 2430.0048
LEU 2440.0044
LEU 2450.0027
LYS 2460.0031
HIS 2470.0040
MET 2480.0028
LEU 2490.0019
GLN 2500.0035
VAL 2510.0042
ASP 2520.0052
PRO 2530.0044
MET 2540.0055
LYS 2550.0057
ARG 2560.0041
ALA 2570.0041
THR 2580.0043
ILE 2590.0048
LYS 2600.0063
ASP 2610.0060
ILE 2620.0055
ARG 2630.0068
GLU 2640.0078
HIS 2650.0071
GLU 2660.0080
TRP 2670.0071
PHE 2680.0069
LYS 2690.0081
GLN 2700.0089
ASP 2710.0096
LEU 2720.0064
PRO 2730.0066
LYS 2740.0076
TYR 2750.0085
LEU 2760.0077
PHE 2770.0080
PRO 2780.0163
GLU 2790.0138
ASP 2800.0116
ALA 3210.1701
VAL 3220.0766
ALA 3230.0656
TYR 3240.0755
HIS 3250.0874
LEU 3260.0482
ILE 3270.0696
ILE 3280.1118
ASP 3290.0939
ASN 3300.0718
ARG 3310.0761
ARG 3320.0808
ILE 3330.0651
MET 3340.0497
ASN 3350.0478
GLU 3360.0504
ALA 3370.0344
LYS 3380.0217
ASP 3390.0120
PHE 3400.0166
TYR 3410.0242
LEU 3420.0171
ALA 3430.0158
THR 3440.0151
SER 3450.0130
PRO 3460.0127
PRO 3470.0155
ASP 3480.0335
SER 3490.0253
PHE 3500.0222
LEU 3510.0108
ASP 3520.0214
ASP 3530.0468
HIS 3540.0446
HIS 3550.0219
LEU 3560.0157
THR 3570.0193
ARG 3580.0206
PRO 3590.0190
HIS 3600.0175
PRO 3610.0177
GLU 3620.0178
ARG 3630.0172
VAL 3640.0173
PRO 3650.0178
PHE 3660.0231
LEU 3670.0212
VAL 3680.0181
ALA 3690.0272
GLU 3700.0395
THR 3710.0351
PRO 3720.0189
ARG 3730.0237
ALA 3740.0549
ALA 3940.0067
LYS 3950.0058
TRP 3960.0055
HIS 3970.0047
LEU 3980.0046
GLY 3990.0039
ILE 4000.0034
ARG 4010.0029
SER 4020.0022
GLN 4030.0015
SER 4040.0011
ARG 4050.0017
PRO 4060.0026
ASN 4070.0031
ASP 4080.0023
ILE 4090.0020
MET 4100.0031
ALA 4110.0030
GLU 4120.0021
VAL 4130.0022
CYS 4140.0034
ARG 4150.0031
ALA 4160.0020
ILE 4170.0032
LYS 4180.0041
GLN 4190.0030
LEU 4200.0029
ASP 4210.0045
TYR 4220.0050
GLU 4230.0064
TRP 4240.0060
LYS 4250.0069
VAL 4260.0065
VAL 4270.0070
ASN 4280.0062
PRO 4290.0052
TYR 4300.0046
TYR 4310.0053
LEU 4320.0053
ARG 4330.0062
VAL 4340.0056
ARG 4350.0065
ARG 4360.0059
LYS 4370.0067
ASN 4380.0061
PRO 4390.0057
VAL 4400.0062
THR 4410.0079
SER 4420.0082
THR 4430.0086
PHE 4440.0084
SER 4450.0071
LYS 4460.0069
MET 4470.0060
SER 4480.0056
LEU 4490.0046
GLN 4500.0048
LEU 4510.0041
TYR 4520.0044
GLN 4530.0040
VAL 4540.0040
ASP 4550.0035
SER 4560.0030
ARG 4570.0021
THR 4580.0026
TYR 4590.0030
LEU 4600.0035
LEU 4610.0036
ASP 4620.0044
PHE 4630.0048
ARG 4640.0058
SER 4650.0064
ILE 4660.0080
ASP 4670.0100
ASP 4680.0122
GLU 4690.0365
ILE 4700.0462
LYS 2030.0045
SER 2040.0043
PRO 2050.0043
PRO 2060.0052
ILE 2070.0051
LEU 2080.0052
PRO 2090.0051
PRO 2100.0051
HIS 2110.0049
LEU 2120.0052
LEU 2130.0050
GLN 2140.0054
VAL 2150.0057
ILE 2160.0071
LEU 2170.0069
ASN 2180.0066
LYS 2190.0085
ASP 2200.0108
THR 2210.0136
ASN 2220.0146
ILE 2230.0161
SER 2240.0162
CYS 2250.0161
ASP 2260.0173
PRO 2270.0173
ALA 2280.0185
LEU 2290.0179
LEU 2300.0131
PRO 2310.0131
GLU 2320.0131
PRO 2330.0064
ASN 2340.0066
HIS 2350.0059
VAL 2360.0057
MET 2370.0052
LEU 2380.0055
ASN 2390.0062
HIS 2400.0056
LEU 2410.0051
TYR 2420.0051
ALA 2430.0049
LEU 2440.0054
SER 2450.0051
ILE 2460.0053
LYS 2470.0072
ASP 2480.0081
SER 2490.0069
VAL 2500.0070
MET 2510.0057
VAL 2520.0063
LEU 2530.0058
SER 2540.0062
ALA 2550.0063
THR 2560.0068
HIS 2570.0068
ARG 2580.0062
TYR 2590.0063
LYS 2600.0059
LYS 2610.0083
LYS 2620.0096
TYR 2630.0075
VAL 2640.0073
THR 2650.0069
THR 2660.0081
LEU 2670.0077
LEU 2680.0073
TYR 2690.0076
LYS 2700.0066
PRO 2710.0065
PRO 5280.0102
GLY 5290.0087
SER 5300.0088
HIS 5310.0078
THR 5320.0076
ILE 5330.0066
GLU 5340.0062
PHE 5350.0059
PHE 5360.0055
GLU 5370.0049
MET 5380.0041
CYS 5390.0038
ALA 5400.0036
ASN 5410.0024
LEU 5420.0020
ILE 5430.0021
LYS 5440.0019
ILE 5450.0007
LEU 5460.0008
ALA 5470.0024
GLN 5480.0033

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.