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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0954
ARG 100.0236
VAL 110.0163
LYS 120.0153
ILE 130.0102
GLY 140.0172
HIS 150.0218
TYR 160.0162
ILE 170.0190
LEU 180.0170
GLY 190.0206
ASP 200.0228
THR 210.0211
LEU 220.0203
GLY 230.0191
VAL 240.0214
GLY 250.0177
THR 260.0191
PHE 270.0212
GLY 280.0169
LYS 290.0156
VAL 300.0136
LYS 310.0145
VAL 320.0147
GLY 330.0131
LYS 340.0195
HIS 350.0218
GLU 360.0285
LEU 370.0336
THR 380.0305
GLY 390.0265
HIS 400.0175
LYS 410.0137
VAL 420.0082
ALA 430.0080
VAL 440.0057
LYS 450.0072
ILE 460.0092
LEU 470.0132
ASN 480.0156
ARG 490.0210
GLN 500.0247
LYS 510.0257
ILE 520.0244
ARG 530.0302
SER 540.0357
LEU 550.0321
ASP 560.0284
VAL 570.0209
VAL 580.0200
GLY 590.0150
LYS 600.0100
ILE 610.0103
ARG 620.0108
ARG 630.0061
GLU 640.0048
ILE 650.0054
GLN 660.0057
ASN 670.0022
LEU 680.0023
LYS 690.0032
LEU 700.0033
PHE 710.0031
ARG 720.0038
HIS 730.0057
PRO 740.0069
HIS 750.0056
ILE 760.0036
ILE 770.0031
LYS 780.0026
LEU 790.0030
TYR 800.0038
GLN 810.0044
VAL 820.0061
ILE 830.0080
SER 840.0116
THR 850.0125
PRO 860.0174
SER 870.0153
ASP 880.0120
ILE 890.0101
PHE 900.0043
MET 910.0033
VAL 920.0011
MET 930.0021
GLU 940.0039
TYR 950.0063
VAL 960.0045
SER 970.0084
GLY 980.0104
GLY 990.0089
GLU 1000.0080
LEU 1010.0084
PHE 1020.0086
ASP 1030.0120
TYR 1040.0121
ILE 1050.0122
CYS 1060.0159
LYS 1070.0174
ASN 1080.0174
GLY 1090.0164
ARG 1100.0128
LEU 1110.0121
ASP 1120.0128
GLU 1130.0108
LYS 1140.0136
GLU 1150.0125
SER 1160.0092
ARG 1170.0088
ARG 1180.0105
LEU 1190.0084
PHE 1200.0060
GLN 1210.0080
GLN 1220.0077
ILE 1230.0049
LEU 1240.0049
SER 1250.0067
GLY 1260.0046
VAL 1270.0034
ASP 1280.0060
TYR 1290.0055
CYS 1300.0036
HIS 1310.0057
ARG 1320.0076
HIS 1330.0048
MET 1340.0052
VAL 1350.0034
VAL 1360.0037
HIS 1370.0024
ARG 1380.0032
ASP 1390.0036
LEU 1400.0018
LYS 1410.0033
PRO 1420.0045
GLU 1430.0058
ASN 1440.0035
VAL 1450.0046
LEU 1460.0062
LEU 1470.0084
ASP 1480.0086
ALA 1490.0114
HIS 1500.0126
MET 1510.0116
ASN 1520.0095
ALA 1530.0070
LYS 1540.0047
ILE 1550.0031
ALA 1560.0023
ASP 1570.0024
PHE 1580.0023
GLY 1590.0036
LEU 1600.0020
SER 1610.0019
ASN 1620.0027
MET 1630.0038
MET 1640.0058
SER 1650.0068
ASP 1660.0080
GLY 1670.0079
GLU 1680.0077
PHE 1690.0077
LEU 1700.0076
ARG 1710.0076
SER 1730.0068
CYS 1740.0052
GLY 1750.0046
SER 1760.0077
PRO 1770.0113
ASN 1780.0096
TYR 1790.0056
ALA 1800.0072
ALA 1810.0082
PRO 1820.0109
GLU 1830.0108
VAL 1840.0089
ILE 1850.0100
SER 1860.0115
GLY 1870.0093
ARG 1880.0086
LEU 1890.0083
TYR 1900.0083
ALA 1910.0086
GLY 1920.0073
PRO 1930.0066
GLU 1940.0075
VAL 1950.0066
ASP 1960.0046
ILE 1970.0048
TRP 1980.0055
SER 1990.0038
SER 2000.0010
GLY 2010.0023
VAL 2020.0040
ILE 2030.0032
LEU 2040.0027
TYR 2050.0042
ALA 2060.0072
LEU 2070.0074
LEU 2080.0073
CYS 2090.0086
GLY 2100.0111
THR 2110.0110
LEU 2120.0102
PRO 2130.0091
PHE 2140.0119
ASP 2150.0158
ASP 2160.0206
ASP 2170.0244
HIS 2180.0259
VAL 2190.0219
PRO 2200.0237
THR 2210.0233
LEU 2220.0186
PHE 2230.0170
LYS 2240.0199
LYS 2250.0174
ILE 2260.0138
CYS 2270.0159
ASP 2280.0170
GLY 2290.0135
ILE 2300.0132
PHE 2310.0103
TYR 2320.0089
THR 2330.0053
PRO 2340.0077
GLN 2350.0080
TYR 2360.0088
LEU 2370.0059
ASN 2380.0060
PRO 2390.0040
SER 2400.0063
VAL 2410.0040
ILE 2420.0012
SER 2430.0048
LEU 2440.0044
LEU 2450.0030
LYS 2460.0062
HIS 2470.0072
MET 2480.0059
LEU 2490.0072
GLN 2500.0103
VAL 2510.0120
ASP 2520.0133
PRO 2530.0116
MET 2540.0125
LYS 2550.0129
ARG 2560.0105
ALA 2570.0085
THR 2580.0096
ILE 2590.0088
LYS 2600.0123
ASP 2610.0109
ILE 2620.0085
ARG 2630.0109
GLU 2640.0131
HIS 2650.0106
GLU 2660.0118
TRP 2670.0094
PHE 2680.0096
LYS 2690.0133
GLN 2700.0140
ASP 2710.0162
LEU 2720.0145
PRO 2730.0151
LYS 2740.0161
TYR 2750.0142
LEU 2760.0117
PHE 2770.0119
PRO 2780.0134
GLU 2790.0163
ASP 2800.0168
ALA 3210.0478
VAL 3220.0239
ALA 3230.0219
TYR 3240.0233
HIS 3250.0263
LEU 3260.0124
ILE 3270.0244
ILE 3280.0350
ASP 3290.0248
ASN 3300.0203
ARG 3310.0242
ARG 3320.0239
ILE 3330.0195
MET 3340.0164
ASN 3350.0159
GLU 3360.0176
ALA 3370.0130
LYS 3380.0072
ASP 3390.0030
PHE 3400.0072
TYR 3410.0054
LEU 3420.0025
ALA 3430.0029
THR 3440.0023
SER 3450.0026
PRO 3460.0044
PRO 3470.0103
ASP 3480.0254
SER 3490.0222
PHE 3500.0176
LEU 3510.0121
ASP 3520.0166
ASP 3530.0339
HIS 3540.0353
HIS 3550.0179
LEU 3560.0148
THR 3570.0117
ARG 3580.0111
PRO 3590.0096
HIS 3600.0065
PRO 3610.0047
GLU 3620.0036
ARG 3630.0049
VAL 3640.0073
PRO 3650.0101
PHE 3660.0116
LEU 3670.0129
VAL 3680.0126
ALA 3690.0177
GLU 3700.0257
THR 3710.0245
PRO 3720.0167
ARG 3730.0216
ALA 3740.0407
ALA 3940.0058
LYS 3950.0031
TRP 3960.0032
HIS 3970.0026
LEU 3980.0026
GLY 3990.0031
ILE 4000.0039
ARG 4010.0047
SER 4020.0070
GLN 4030.0096
SER 4040.0108
ARG 4050.0115
PRO 4060.0095
ASN 4070.0105
ASP 4080.0111
ILE 4090.0084
MET 4100.0072
ALA 4110.0088
GLU 4120.0084
VAL 4130.0059
CYS 4140.0053
ARG 4150.0070
ALA 4160.0069
ILE 4170.0049
LYS 4180.0051
GLN 4190.0074
LEU 4200.0075
ASP 4210.0062
TYR 4220.0055
GLU 4230.0055
TRP 4240.0050
LYS 4250.0068
VAL 4260.0078
VAL 4270.0098
ASN 4280.0100
PRO 4290.0095
TYR 4300.0074
TYR 4310.0069
LEU 4320.0058
ARG 4330.0067
VAL 4340.0057
ARG 4350.0075
ARG 4360.0077
LYS 4370.0107
ASN 4380.0134
PRO 4390.0157
VAL 4400.0196
THR 4410.0202
SER 4420.0166
THR 4430.0152
PHE 4440.0118
SER 4450.0101
LYS 4460.0089
MET 4470.0076
SER 4480.0064
LEU 4490.0044
GLN 4500.0050
LEU 4510.0051
TYR 4520.0053
GLN 4530.0058
VAL 4540.0045
ASP 4550.0063
SER 4560.0092
ARG 4570.0097
THR 4580.0073
TYR 4590.0058
LEU 4600.0036
LEU 4610.0033
ASP 4620.0038
PHE 4630.0043
ARG 4640.0063
SER 4650.0082
ILE 4660.0120
ASP 4670.0079
ASP 4680.0045
GLU 4690.0908
ILE 4700.0954
LYS 2030.0140
SER 2040.0114
PRO 2050.0085
PRO 2060.0077
ILE 2070.0068
LEU 2080.0061
PRO 2090.0071
PRO 2100.0073
HIS 2110.0078
LEU 2120.0061
LEU 2130.0055
GLN 2140.0068
VAL 2150.0057
ILE 2160.0072
LEU 2170.0065
ASN 2180.0052
LYS 2190.0050
ASP 2200.0047
THR 2210.0042
ASN 2220.0050
ILE 2230.0071
SER 2240.0068
CYS 2250.0055
ASP 2260.0058
PRO 2270.0055
ALA 2280.0061
LEU 2290.0052
LEU 2300.0058
PRO 2310.0059
GLU 2320.0070
PRO 2330.0094
ASN 2340.0090
HIS 2350.0085
VAL 2360.0083
MET 2370.0073
LEU 2380.0080
ASN 2390.0078
HIS 2400.0058
LEU 2410.0052
TYR 2420.0049
ALA 2430.0058
LEU 2440.0070
SER 2450.0087
ILE 2460.0126
LYS 2470.0175
ASP 2480.0221
SER 2490.0200
VAL 2500.0172
MET 2510.0122
VAL 2520.0109
LEU 2530.0087
SER 2540.0078
ALA 2550.0081
THR 2560.0095
HIS 2570.0106
ARG 2580.0121
TYR 2590.0142
LYS 2600.0163
LYS 2610.0143
LYS 2620.0131
TYR 2630.0125
VAL 2640.0120
THR 2650.0103
THR 2660.0123
LEU 2670.0116
LEU 2680.0125
TYR 2690.0151
LYS 2700.0155
PRO 2710.0176
PRO 5280.0269
GLY 5290.0211
SER 5300.0165
HIS 5310.0128
THR 5320.0115
ILE 5330.0119
GLU 5340.0119
PHE 5350.0095
PHE 5360.0095
GLU 5370.0109
MET 5380.0086
CYS 5390.0071
ALA 5400.0094
ASN 5410.0092
LEU 5420.0069
ILE 5430.0079
LYS 5440.0108
ILE 5450.0100
LEU 5460.0090
ALA 5470.0111
GLN 5480.0140

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.