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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1594
ARG 100.0135
VAL 110.0128
LYS 120.0117
ILE 130.0102
GLY 140.0112
HIS 150.0111
TYR 160.0088
ILE 170.0099
LEU 180.0081
GLY 190.0068
ASP 200.0048
THR 210.0049
LEU 220.0039
GLY 230.0048
VAL 240.0059
GLY 250.0051
THR 260.0073
PHE 270.0081
GLY 280.0077
LYS 290.0064
VAL 300.0049
LYS 310.0048
VAL 320.0039
GLY 330.0051
LYS 340.0076
HIS 350.0094
GLU 360.0122
LEU 370.0136
THR 380.0122
GLY 390.0103
HIS 400.0075
LYS 410.0047
VAL 420.0029
ALA 430.0029
VAL 440.0042
LYS 450.0051
ILE 460.0073
LEU 470.0093
ASN 480.0114
ARG 490.0144
GLN 500.0151
LYS 510.0136
ILE 520.0131
ARG 530.0156
SER 540.0171
LEU 550.0167
ASP 560.0158
VAL 570.0127
VAL 580.0106
GLY 590.0104
LYS 600.0092
ILE 610.0061
ARG 620.0068
ARG 630.0072
GLU 640.0065
ILE 650.0057
GLN 660.0066
ASN 670.0061
LEU 680.0059
LYS 690.0061
LEU 700.0064
PHE 710.0061
ARG 720.0060
HIS 730.0062
PRO 740.0062
HIS 750.0059
ILE 760.0058
ILE 770.0052
LYS 780.0050
LEU 790.0042
TYR 800.0027
GLN 810.0036
VAL 820.0059
ILE 830.0079
SER 840.0111
THR 850.0141
PRO 860.0171
SER 870.0155
ASP 880.0123
ILE 890.0102
PHE 900.0076
MET 910.0051
VAL 920.0036
MET 930.0029
GLU 940.0031
TYR 950.0029
VAL 960.0043
SER 970.0055
GLY 980.0070
GLY 990.0068
GLU 1000.0075
LEU 1010.0074
PHE 1020.0076
ASP 1030.0083
TYR 1040.0080
ILE 1050.0077
CYS 1060.0084
LYS 1070.0089
ASN 1080.0085
GLY 1090.0074
ARG 1100.0067
LEU 1110.0066
ASP 1120.0064
GLU 1130.0058
LYS 1140.0066
GLU 1150.0066
SER 1160.0060
ARG 1170.0056
ARG 1180.0057
LEU 1190.0058
PHE 1200.0054
GLN 1210.0052
GLN 1220.0058
ILE 1230.0055
LEU 1240.0048
SER 1250.0053
GLY 1260.0054
VAL 1270.0050
ASP 1280.0051
TYR 1290.0055
CYS 1300.0053
HIS 1310.0048
ARG 1320.0053
HIS 1330.0052
MET 1340.0043
VAL 1350.0054
VAL 1360.0049
HIS 1370.0057
ARG 1380.0057
ASP 1390.0062
LEU 1400.0061
LYS 1410.0065
PRO 1420.0069
GLU 1430.0071
ASN 1440.0067
VAL 1450.0065
LEU 1460.0064
LEU 1470.0064
ASP 1480.0060
ALA 1490.0062
HIS 1500.0058
MET 1510.0065
ASN 1520.0062
ALA 1530.0060
LYS 1540.0059
ILE 1550.0060
ALA 1560.0058
ASP 1570.0059
PHE 1580.0062
GLY 1590.0062
LEU 1600.0063
SER 1610.0063
ASN 1620.0061
MET 1630.0062
MET 1640.0031
SER 1650.0031
ASP 1660.0061
GLY 1670.0070
GLU 1680.0067
PHE 1690.0050
LEU 1700.0046
ARG 1710.0047
SER 1730.0051
CYS 1740.0062
GLY 1750.0056
SER 1760.0067
PRO 1770.0070
ASN 1780.0062
TYR 1790.0051
ALA 1800.0048
ALA 1810.0036
PRO 1820.0033
GLU 1830.0033
VAL 1840.0040
ILE 1850.0049
SER 1860.0050
GLY 1870.0058
ARG 1880.0052
LEU 1890.0052
TYR 1900.0031
ALA 1910.0027
GLY 1920.0024
PRO 1930.0019
GLU 1940.0013
VAL 1950.0028
ASP 1960.0038
ILE 1970.0032
TRP 1980.0032
SER 1990.0045
SER 2000.0047
GLY 2010.0041
VAL 2020.0047
ILE 2030.0054
LEU 2040.0052
TYR 2050.0050
ALA 2060.0057
LEU 2070.0060
LEU 2080.0055
CYS 2090.0058
GLY 2100.0065
THR 2110.0062
LEU 2120.0061
PRO 2130.0049
PHE 2140.0053
ASP 2150.0071
ASP 2160.0081
ASP 2170.0097
HIS 2180.0099
VAL 2190.0092
PRO 2200.0089
THR 2210.0078
LEU 2220.0070
PHE 2230.0063
LYS 2240.0059
LYS 2250.0052
ILE 2260.0044
CYS 2270.0041
ASP 2280.0036
GLY 2290.0024
ILE 2300.0026
PHE 2310.0031
TYR 2320.0032
THR 2330.0035
PRO 2340.0038
GLN 2350.0041
TYR 2360.0047
LEU 2370.0044
ASN 2380.0045
PRO 2390.0037
SER 2400.0039
VAL 2410.0039
ILE 2420.0032
SER 2430.0027
LEU 2440.0031
LEU 2450.0030
LYS 2460.0020
HIS 2470.0017
MET 2480.0025
LEU 2490.0023
GLN 2500.0013
VAL 2510.0018
ASP 2520.0019
PRO 2530.0018
MET 2540.0026
LYS 2550.0020
ARG 2560.0008
ALA 2570.0018
THR 2580.0026
ILE 2590.0036
LYS 2600.0037
ASP 2610.0031
ILE 2620.0036
ARG 2630.0041
GLU 2640.0038
HIS 2650.0040
GLU 2660.0042
TRP 2670.0045
PHE 2680.0048
LYS 2690.0050
GLN 2700.0059
ASP 2710.0069
LEU 2720.0062
PRO 2730.0070
LYS 2740.0081
TYR 2750.0073
LEU 2760.0066
PHE 2770.0064
PRO 2780.0072
GLU 2790.0122
ASP 2800.0127
ALA 3210.1390
VAL 3220.0502
ALA 3230.0779
TYR 3240.0971
HIS 3250.1594
LEU 3260.1043
ILE 3270.0380
ILE 3280.0966
ASP 3290.1006
ASN 3300.0359
ARG 3310.0216
ARG 3320.0362
ILE 3330.0336
MET 3340.0246
ASN 3350.0209
GLU 3360.0263
ALA 3370.0247
LYS 3380.0209
ASP 3390.0213
PHE 3400.0207
TYR 3410.0176
LEU 3420.0164
ALA 3430.0154
THR 3440.0180
SER 3450.0181
PRO 3460.0132
PRO 3470.0112
ASP 3480.0254
SER 3490.0274
PHE 3500.0272
LEU 3510.0313
ASP 3520.0264
ASP 3530.0280
HIS 3540.0286
HIS 3550.0125
LEU 3560.0074
THR 3570.0112
ARG 3580.0132
PRO 3590.0118
HIS 3600.0131
PRO 3610.0138
GLU 3620.0134
ARG 3630.0117
VAL 3640.0115
PRO 3650.0110
PHE 3660.0113
LEU 3670.0104
VAL 3680.0091
ALA 3690.0104
GLU 3700.0130
THR 3710.0102
PRO 3720.0040
ARG 3730.0035
ALA 3740.0118
ALA 3940.0084
LYS 3950.0081
TRP 3960.0080
HIS 3970.0084
LEU 3980.0079
GLY 3990.0081
ILE 4000.0058
ARG 4010.0056
SER 4020.0045
GLN 4030.0039
SER 4040.0024
ARG 4050.0034
PRO 4060.0054
ASN 4070.0064
ASP 4080.0043
ILE 4090.0035
MET 4100.0067
ALA 4110.0077
GLU 4120.0070
VAL 4130.0063
CYS 4140.0100
ARG 4150.0109
ALA 4160.0086
ILE 4170.0101
LYS 4180.0136
GLN 4190.0126
LEU 4200.0113
ASP 4210.0144
TYR 4220.0136
GLU 4230.0165
TRP 4240.0148
LYS 4250.0167
VAL 4260.0154
VAL 4270.0164
ASN 4280.0141
PRO 4290.0110
TYR 4300.0093
TYR 4310.0111
LEU 4320.0112
ARG 4330.0138
VAL 4340.0125
ARG 4350.0147
ARG 4360.0131
LYS 4370.0153
ASN 4380.0121
PRO 4390.0135
VAL 4400.0122
THR 4410.0146
SER 4420.0173
THR 4430.0169
PHE 4440.0172
SER 4450.0134
LYS 4460.0137
MET 4470.0112
SER 4480.0105
LEU 4490.0083
GLN 4500.0090
LEU 4510.0077
TYR 4520.0085
GLN 4530.0087
VAL 4540.0089
ASP 4550.0088
SER 4560.0088
ARG 4570.0069
THR 4580.0067
TYR 4590.0067
LEU 4600.0070
LEU 4610.0067
ASP 4620.0077
PHE 4630.0078
ARG 4640.0094
SER 4650.0103
ILE 4660.0140
ASP 4670.0206
ASP 4680.0268
GLU 4690.0530
ILE 4700.0637
LYS 2030.0123
SER 2040.0108
PRO 2050.0091
PRO 2060.0100
ILE 2070.0100
LEU 2080.0094
PRO 2090.0067
PRO 2100.0065
HIS 2110.0057
LEU 2120.0075
LEU 2130.0078
GLN 2140.0073
VAL 2150.0070
ILE 2160.0066
LEU 2170.0064
ASN 2180.0066
LYS 2190.0069
ASP 2200.0073
THR 2210.0101
ASN 2220.0114
ILE 2230.0103
SER 2240.0136
CYS 2250.0142
ASP 2260.0143
PRO 2270.0116
ALA 2280.0124
LEU 2290.0131
LEU 2300.0094
PRO 2310.0105
GLU 2320.0096
PRO 2330.0054
ASN 2340.0058
HIS 2350.0053
VAL 2360.0067
MET 2370.0075
LEU 2380.0075
ASN 2390.0097
HIS 2400.0090
LEU 2410.0083
TYR 2420.0081
ALA 2430.0083
LEU 2440.0086
SER 2450.0088
ILE 2460.0102
LYS 2470.0130
ASP 2480.0164
SER 2490.0147
VAL 2500.0123
MET 2510.0091
VAL 2520.0091
LEU 2530.0079
SER 2540.0087
ALA 2550.0085
THR 2560.0083
HIS 2570.0080
ARG 2580.0058
TYR 2590.0061
LYS 2600.0071
LYS 2610.0065
LYS 2620.0070
TYR 2630.0060
VAL 2640.0062
THR 2650.0066
THR 2660.0102
LEU 2670.0099
LEU 2680.0097
TYR 2690.0107
LYS 2700.0099
PRO 2710.0116
PRO 5280.0142
GLY 5290.0109
SER 5300.0126
HIS 5310.0119
THR 5320.0114
ILE 5330.0089
GLU 5340.0081
PHE 5350.0081
PHE 5360.0068
GLU 5370.0051
MET 5380.0055
CYS 5390.0047
ALA 5400.0037
ASN 5410.0039
LEU 5420.0043
ILE 5430.0029
LYS 5440.0044
ILE 5450.0061
LEU 5460.0042
ALA 5470.0053
GLN 5480.0083

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.