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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1098
ARG 100.0084
VAL 110.0079
LYS 120.0071
ILE 130.0060
GLY 140.0068
HIS 150.0067
TYR 160.0047
ILE 170.0056
LEU 180.0039
GLY 190.0031
ASP 200.0016
THR 210.0011
LEU 220.0024
GLY 230.0038
VAL 240.0052
GLY 250.0056
THR 260.0076
PHE 270.0074
GLY 280.0062
LYS 290.0044
VAL 300.0031
LYS 310.0016
VAL 320.0007
GLY 330.0016
LYS 340.0043
HIS 350.0055
GLU 360.0079
LEU 370.0091
THR 380.0084
GLY 390.0072
HIS 400.0049
LYS 410.0032
VAL 420.0013
ALA 430.0018
VAL 440.0024
LYS 450.0039
ILE 460.0050
LEU 470.0073
ASN 480.0087
ARG 490.0117
GLN 500.0121
LYS 510.0112
ILE 520.0114
ARG 530.0136
SER 540.0152
LEU 550.0151
ASP 560.0142
VAL 570.0116
VAL 580.0090
GLY 590.0091
LYS 600.0090
ILE 610.0065
ARG 620.0068
ARG 630.0075
GLU 640.0069
ILE 650.0064
GLN 660.0073
ASN 670.0073
LEU 680.0068
LYS 690.0071
LEU 700.0077
PHE 710.0073
ARG 720.0072
HIS 730.0072
PRO 740.0069
HIS 750.0065
ILE 760.0064
ILE 770.0056
LYS 780.0056
LEU 790.0051
TYR 800.0036
GLN 810.0037
VAL 820.0051
ILE 830.0057
SER 840.0086
THR 850.0106
PRO 860.0135
SER 870.0118
ASP 880.0091
ILE 890.0077
PHE 900.0052
MET 910.0044
VAL 920.0028
MET 930.0033
GLU 940.0039
TYR 950.0036
VAL 960.0046
SER 970.0042
GLY 980.0050
GLY 990.0048
GLU 1000.0052
LEU 1010.0055
PHE 1020.0052
ASP 1030.0051
TYR 1040.0054
ILE 1050.0054
CYS 1060.0053
LYS 1070.0054
ASN 1080.0057
GLY 1090.0056
ARG 1100.0056
LEU 1110.0060
ASP 1120.0066
GLU 1130.0070
LYS 1140.0074
GLU 1150.0067
SER 1160.0064
ARG 1170.0069
ARG 1180.0070
LEU 1190.0065
PHE 1200.0066
GLN 1210.0072
GLN 1220.0071
ILE 1230.0066
LEU 1240.0067
SER 1250.0072
GLY 1260.0067
VAL 1270.0065
ASP 1280.0073
TYR 1290.0073
CYS 1300.0067
HIS 1310.0068
ARG 1320.0076
HIS 1330.0070
MET 1340.0063
VAL 1350.0067
VAL 1360.0060
HIS 1370.0060
ARG 1380.0057
ASP 1390.0056
LEU 1400.0057
LYS 1410.0055
PRO 1420.0055
GLU 1430.0051
ASN 1440.0055
VAL 1450.0058
LEU 1460.0054
LEU 1470.0056
ASP 1480.0053
ALA 1490.0053
HIS 1500.0059
MET 1510.0060
ASN 1520.0063
ALA 1530.0062
LYS 1540.0060
ILE 1550.0062
ALA 1560.0055
ASP 1570.0059
PHE 1580.0064
GLY 1590.0063
LEU 1600.0062
SER 1610.0067
ASN 1620.0069
MET 1630.0071
MET 1640.0043
SER 1650.0030
ASP 1660.0033
GLY 1670.0042
GLU 1680.0040
PHE 1690.0025
LEU 1700.0031
ARG 1710.0031
SER 1730.0042
CYS 1740.0050
GLY 1750.0045
SER 1760.0051
PRO 1770.0052
ASN 1780.0047
TYR 1790.0042
ALA 1800.0042
ALA 1810.0039
PRO 1820.0033
GLU 1830.0031
VAL 1840.0032
ILE 1850.0038
SER 1860.0038
GLY 1870.0039
ARG 1880.0029
LEU 1890.0029
TYR 1900.0012
ALA 1910.0023
GLY 1920.0031
PRO 1930.0031
GLU 1940.0029
VAL 1950.0035
ASP 1960.0043
ILE 1970.0043
TRP 1980.0040
SER 1990.0044
SER 2000.0049
GLY 2010.0048
VAL 2020.0045
ILE 2030.0049
LEU 2040.0053
TYR 2050.0050
ALA 2060.0050
LEU 2070.0054
LEU 2080.0057
CYS 2090.0053
GLY 2100.0050
THR 2110.0048
LEU 2120.0046
PRO 2130.0045
PHE 2140.0046
ASP 2150.0054
ASP 2160.0061
ASP 2170.0069
HIS 2180.0072
VAL 2190.0066
PRO 2200.0066
THR 2210.0063
LEU 2220.0057
PHE 2230.0053
LYS 2240.0054
LYS 2250.0052
ILE 2260.0046
CYS 2270.0046
ASP 2280.0048
GLY 2290.0043
ILE 2300.0047
PHE 2310.0047
TYR 2320.0050
THR 2330.0056
PRO 2340.0059
GLN 2350.0067
TYR 2360.0067
LEU 2370.0064
ASN 2380.0069
PRO 2390.0070
SER 2400.0072
VAL 2410.0064
ILE 2420.0058
SER 2430.0062
LEU 2440.0059
LEU 2450.0046
LYS 2460.0046
HIS 2470.0047
MET 2480.0044
LEU 2490.0038
GLN 2500.0035
VAL 2510.0032
ASP 2520.0029
PRO 2530.0025
MET 2540.0026
LYS 2550.0019
ARG 2560.0024
ALA 2570.0049
THR 2580.0061
ILE 2590.0071
LYS 2600.0079
ASP 2610.0073
ILE 2620.0071
ARG 2630.0081
GLU 2640.0084
HIS 2650.0076
GLU 2660.0082
TRP 2670.0077
PHE 2680.0077
LYS 2690.0084
GLN 2700.0083
ASP 2710.0083
LEU 2720.0079
PRO 2730.0084
LYS 2740.0075
TYR 2750.0089
LEU 2760.0085
PHE 2770.0084
PRO 2780.0108
GLU 2790.0093
ASP 2800.0099
ALA 3210.0906
VAL 3220.0817
ALA 3230.0684
TYR 3240.0797
HIS 3250.1098
LEU 3260.0974
ILE 3270.0726
ILE 3280.0453
ASP 3290.0716
ASN 3300.0855
ARG 3310.0610
ARG 3320.0433
ILE 3330.0570
MET 3340.0482
ASN 3350.0325
GLU 3360.0400
ALA 3370.0266
LYS 3380.0173
ASP 3390.0165
PHE 3400.0155
TYR 3410.0180
LEU 3420.0161
ALA 3430.0167
THR 3440.0176
SER 3450.0247
PRO 3460.0211
PRO 3470.0208
ASP 3480.0386
SER 3490.0415
PHE 3500.0466
LEU 3510.0522
ASP 3520.0441
ASP 3530.0404
HIS 3540.0353
HIS 3550.0198
LEU 3560.0125
THR 3570.0180
ARG 3580.0174
PRO 3590.0169
HIS 3600.0177
PRO 3610.0193
GLU 3620.0177
ARG 3630.0187
VAL 3640.0209
PRO 3650.0216
PHE 3660.0159
LEU 3670.0142
VAL 3680.0173
ALA 3690.0154
GLU 3700.0168
THR 3710.0195
PRO 3720.0239
ARG 3730.0362
ALA 3740.0431
ALA 3940.0091
LYS 3950.0088
TRP 3960.0076
HIS 3970.0081
LEU 3980.0065
GLY 3990.0071
ILE 4000.0055
ARG 4010.0052
SER 4020.0048
GLN 4030.0043
SER 4040.0051
ARG 4050.0063
PRO 4060.0071
ASN 4070.0089
ASP 4080.0079
ILE 4090.0067
MET 4100.0087
ALA 4110.0102
GLU 4120.0095
VAL 4130.0084
CYS 4140.0111
ARG 4150.0117
ALA 4160.0097
ILE 4170.0103
LYS 4180.0130
GLN 4190.0121
LEU 4200.0105
ASP 4210.0126
TYR 4220.0120
GLU 4230.0144
TRP 4240.0135
LYS 4250.0153
VAL 4260.0147
VAL 4270.0152
ASN 4280.0134
PRO 4290.0115
TYR 4300.0092
TYR 4310.0103
LEU 4320.0105
ARG 4330.0124
VAL 4340.0112
ARG 4350.0125
ARG 4360.0110
LYS 4370.0116
ASN 4380.0084
PRO 4390.0087
VAL 4400.0065
THR 4410.0086
SER 4420.0115
THR 4430.0122
PHE 4440.0135
SER 4450.0107
LYS 4460.0113
MET 4470.0095
SER 4480.0090
LEU 4490.0074
GLN 4500.0077
LEU 4510.0064
TYR 4520.0066
GLN 4530.0066
VAL 4540.0068
ASP 4550.0064
SER 4560.0065
ARG 4570.0055
THR 4580.0054
TYR 4590.0058
LEU 4600.0059
LEU 4610.0058
ASP 4620.0062
PHE 4630.0065
ARG 4640.0074
SER 4650.0082
ILE 4660.0113
ASP 4670.0179
ASP 4680.0241
GLU 4690.0508
ILE 4700.0661
LYS 2030.0104
SER 2040.0091
PRO 2050.0078
PRO 2060.0076
ILE 2070.0075
LEU 2080.0068
PRO 2090.0040
PRO 2100.0042
HIS 2110.0032
LEU 2120.0051
LEU 2130.0060
GLN 2140.0054
VAL 2150.0064
ILE 2160.0054
LEU 2170.0047
ASN 2180.0060
LYS 2190.0080
ASP 2200.0100
THR 2210.0150
ASN 2220.0160
ILE 2230.0153
SER 2240.0175
CYS 2250.0165
ASP 2260.0163
PRO 2270.0163
ALA 2280.0163
LEU 2290.0161
LEU 2300.0105
PRO 2310.0113
GLU 2320.0091
PRO 2330.0047
ASN 2340.0040
HIS 2350.0028
VAL 2360.0039
MET 2370.0052
LEU 2380.0049
ASN 2390.0072
HIS 2400.0066
LEU 2410.0066
TYR 2420.0066
ALA 2430.0080
LEU 2440.0089
SER 2450.0113
ILE 2460.0134
LYS 2470.0157
ASP 2480.0195
SER 2490.0183
VAL 2500.0149
MET 2510.0110
VAL 2520.0094
LEU 2530.0074
SER 2540.0067
ALA 2550.0059
THR 2560.0054
HIS 2570.0058
ARG 2580.0051
TYR 2590.0062
LYS 2600.0082
LYS 2610.0048
LYS 2620.0061
TYR 2630.0042
VAL 2640.0043
THR 2650.0042
THR 2660.0079
LEU 2670.0081
LEU 2680.0091
TYR 2690.0113
LYS 2700.0119
PRO 2710.0150
PRO 5280.0114
GLY 5290.0098
SER 5300.0111
HIS 5310.0097
THR 5320.0095
ILE 5330.0083
GLU 5340.0071
PHE 5350.0070
PHE 5360.0065
GLU 5370.0061
MET 5380.0058
CYS 5390.0056
ALA 5400.0059
ASN 5410.0060
LEU 5420.0063
ILE 5430.0057
LYS 5440.0069
ILE 5450.0082
LEU 5460.0072
ALA 5470.0076
GLN 5480.0095

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.