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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0510
ARG 100.0300
VAL 110.0254
LYS 120.0243
ILE 130.0202
GLY 140.0255
HIS 150.0257
TYR 160.0192
ILE 170.0225
LEU 180.0191
GLY 190.0222
ASP 200.0218
THR 210.0173
LEU 220.0146
GLY 230.0111
VAL 240.0110
GLY 250.0069
THR 260.0064
PHE 270.0058
GLY 280.0064
LYS 290.0088
VAL 300.0091
LYS 310.0121
VAL 320.0124
GLY 330.0123
LYS 340.0179
HIS 350.0199
GLU 360.0272
LEU 370.0292
THR 380.0224
GLY 390.0204
HIS 400.0110
LYS 410.0097
VAL 420.0074
ALA 430.0080
VAL 440.0078
LYS 450.0070
ILE 460.0087
LEU 470.0084
ASN 480.0107
ARG 490.0143
GLN 500.0125
LYS 510.0095
ILE 520.0114
ARG 530.0159
SER 540.0155
LEU 550.0144
ASP 560.0142
VAL 570.0096
VAL 580.0106
GLY 590.0079
LYS 600.0050
ILE 610.0061
ARG 620.0064
ARG 630.0043
GLU 640.0040
ILE 650.0054
GLN 660.0047
ASN 670.0047
LEU 680.0047
LYS 690.0048
LEU 700.0062
PHE 710.0059
ARG 720.0060
HIS 730.0043
PRO 740.0044
HIS 750.0039
ILE 760.0040
ILE 770.0047
LYS 780.0051
LEU 790.0061
TYR 800.0057
GLN 810.0062
VAL 820.0089
ILE 830.0142
SER 840.0175
THR 850.0222
PRO 860.0250
SER 870.0200
ASP 880.0147
ILE 890.0125
PHE 900.0110
MET 910.0067
VAL 920.0069
MET 930.0063
GLU 940.0056
TYR 950.0060
VAL 960.0064
SER 970.0065
GLY 980.0047
GLY 990.0085
GLU 1000.0094
LEU 1010.0096
PHE 1020.0099
ASP 1030.0153
TYR 1040.0166
ILE 1050.0169
CYS 1060.0208
LYS 1070.0240
ASN 1080.0262
GLY 1090.0261
ARG 1100.0226
LEU 1110.0218
ASP 1120.0243
GLU 1130.0236
LYS 1140.0232
GLU 1150.0191
SER 1160.0170
ARG 1170.0167
ARG 1180.0130
LEU 1190.0111
PHE 1200.0107
GLN 1210.0099
GLN 1220.0068
ILE 1230.0053
LEU 1240.0062
SER 1250.0045
GLY 1260.0024
VAL 1270.0033
ASP 1280.0052
TYR 1290.0045
CYS 1300.0054
HIS 1310.0069
ARG 1320.0078
HIS 1330.0081
MET 1340.0080
VAL 1350.0066
VAL 1360.0065
HIS 1370.0053
ARG 1380.0046
ASP 1390.0036
LEU 1400.0027
LYS 1410.0031
PRO 1420.0050
GLU 1430.0058
ASN 1440.0049
VAL 1450.0046
LEU 1460.0059
LEU 1470.0065
ASP 1480.0068
ALA 1490.0097
HIS 1500.0108
MET 1510.0114
ASN 1520.0082
ALA 1530.0066
LYS 1540.0039
ILE 1550.0035
ALA 1560.0049
ASP 1570.0048
PHE 1580.0051
GLY 1590.0051
LEU 1600.0042
SER 1610.0048
ASN 1620.0057
MET 1630.0073
MET 1640.0082
SER 1650.0105
ASP 1660.0128
GLY 1670.0128
GLU 1680.0133
PHE 1690.0117
LEU 1700.0120
ARG 1710.0125
SER 1730.0103
CYS 1740.0083
GLY 1750.0057
SER 1760.0038
PRO 1770.0045
ASN 1780.0048
TYR 1790.0041
ALA 1800.0059
ALA 1810.0087
PRO 1820.0109
GLU 1830.0124
VAL 1840.0107
ILE 1850.0116
SER 1860.0148
GLY 1870.0148
ARG 1880.0125
LEU 1890.0119
TYR 1900.0117
ALA 1910.0103
GLY 1920.0087
PRO 1930.0067
GLU 1940.0069
VAL 1950.0067
ASP 1960.0049
ILE 1970.0063
TRP 1980.0075
SER 1990.0049
SER 2000.0059
GLY 2010.0097
VAL 2020.0090
ILE 2030.0083
LEU 2040.0124
TYR 2050.0146
ALA 2060.0138
LEU 2070.0155
LEU 2080.0194
CYS 2090.0204
GLY 2100.0186
THR 2110.0158
LEU 2120.0118
PRO 2130.0138
PHE 2140.0114
ASP 2150.0105
ASP 2160.0105
ASP 2170.0076
HIS 2180.0103
VAL 2190.0096
PRO 2200.0142
THR 2210.0153
LEU 2220.0121
PHE 2230.0132
LYS 2240.0173
LYS 2250.0163
ILE 2260.0138
CYS 2270.0172
ASP 2280.0201
GLY 2290.0199
ILE 2300.0212
PHE 2310.0196
TYR 2320.0228
THR 2330.0256
PRO 2340.0292
GLN 2350.0344
TYR 2360.0322
LEU 2370.0284
ASN 2380.0293
PRO 2390.0301
SER 2400.0275
VAL 2410.0230
ILE 2420.0237
SER 2430.0246
LEU 2440.0197
LEU 2450.0161
LYS 2460.0188
HIS 2470.0173
MET 2480.0127
LEU 2490.0124
GLN 2500.0147
VAL 2510.0141
ASP 2520.0145
PRO 2530.0104
MET 2540.0111
LYS 2550.0118
ARG 2560.0102
ALA 2570.0140
THR 2580.0138
ILE 2590.0122
LYS 2600.0167
ASP 2610.0183
ILE 2620.0159
ARG 2630.0161
GLU 2640.0206
HIS 2650.0218
GLU 2660.0246
TRP 2670.0228
PHE 2680.0184
LYS 2690.0204
GLN 2700.0222
ASP 2710.0205
LEU 2720.0161
PRO 2730.0130
LYS 2740.0117
TYR 2750.0067
LEU 2760.0070
PHE 2770.0078
PRO 2780.0092
GLU 2790.0126
ASP 2800.0100
ALA 3210.0383
VAL 3220.0253
ALA 3230.0209
TYR 3240.0127
HIS 3250.0098
LEU 3260.0226
ILE 3270.0327
ILE 3280.0274
ASP 3290.0211
ASN 3300.0300
ARG 3310.0326
ARG 3320.0218
ILE 3330.0231
MET 3340.0264
ASN 3350.0238
GLU 3360.0208
ALA 3370.0191
LYS 3380.0189
ASP 3390.0163
PHE 3400.0176
TYR 3410.0180
LEU 3420.0161
ALA 3430.0139
THR 3440.0146
SER 3450.0168
PRO 3460.0132
PRO 3470.0116
ASP 3480.0136
SER 3490.0129
PHE 3500.0198
LEU 3510.0147
ASP 3520.0142
ASP 3530.0193
HIS 3540.0201
HIS 3550.0179
LEU 3560.0159
THR 3570.0137
ARG 3580.0169
PRO 3590.0156
HIS 3600.0165
PRO 3610.0180
GLU 3620.0160
ARG 3630.0135
VAL 3640.0143
PRO 3650.0118
PHE 3660.0099
LEU 3670.0131
VAL 3680.0126
ALA 3690.0140
GLU 3700.0225
THR 3710.0263
PRO 3720.0219
ARG 3730.0362
ALA 3740.0510
ALA 3940.0197
LYS 3950.0196
TRP 3960.0176
HIS 3970.0176
LEU 3980.0163
GLY 3990.0140
ILE 4000.0179
ARG 4010.0206
SER 4020.0229
GLN 4030.0266
SER 4040.0267
ARG 4050.0275
PRO 4060.0240
ASN 4070.0230
ASP 4080.0240
ILE 4090.0221
MET 4100.0195
ALA 4110.0204
GLU 4120.0219
VAL 4130.0194
CYS 4140.0176
ARG 4150.0199
ALA 4160.0191
ILE 4170.0159
LYS 4180.0169
GLN 4190.0186
LEU 4200.0156
ASP 4210.0141
TYR 4220.0115
GLU 4230.0096
TRP 4240.0112
LYS 4250.0115
VAL 4260.0147
VAL 4270.0154
ASN 4280.0177
PRO 4290.0192
TYR 4300.0179
TYR 4310.0157
LEU 4320.0136
ARG 4330.0114
VAL 4340.0103
ARG 4350.0074
ARG 4360.0079
LYS 4370.0069
ASN 4380.0073
PRO 4390.0121
VAL 4400.0118
THR 4410.0095
SER 4420.0087
THR 4430.0049
PHE 4440.0033
SER 4450.0051
LYS 4460.0070
MET 4470.0100
SER 4480.0121
LEU 4490.0134
GLN 4500.0151
LEU 4510.0145
TYR 4520.0169
GLN 4530.0199
VAL 4540.0227
ASP 4550.0277
SER 4560.0311
ARG 4570.0298
THR 4580.0258
TYR 4590.0218
LEU 4600.0184
LEU 4610.0161
ASP 4620.0145
PHE 4630.0138
ARG 4640.0128
SER 4650.0105
ILE 4660.0109
ASP 4670.0113
ASP 4680.0099
GLU 4690.0237
ILE 4700.0293
LYS 2030.0204
SER 2040.0212
PRO 2050.0192
PRO 2060.0149
ILE 2070.0158
LEU 2080.0155
PRO 2090.0132
PRO 2100.0126
HIS 2110.0127
LEU 2120.0143
LEU 2130.0148
GLN 2140.0150
VAL 2150.0176
ILE 2160.0163
LEU 2170.0152
ASN 2180.0165
LYS 2190.0159
ASP 2200.0129
THR 2210.0122
ASN 2220.0118
ILE 2230.0112
SER 2240.0143
CYS 2250.0152
ASP 2260.0154
PRO 2270.0128
ALA 2280.0136
LEU 2290.0146
LEU 2300.0132
PRO 2310.0148
GLU 2320.0159
PRO 2330.0154
ASN 2340.0140
HIS 2350.0132
VAL 2360.0140
MET 2370.0143
LEU 2380.0141
ASN 2390.0125
HIS 2400.0138
LEU 2410.0133
TYR 2420.0146
ALA 2430.0150
LEU 2440.0167
SER 2450.0198
ILE 2460.0188
LYS 2470.0211
ASP 2480.0226
SER 2490.0191
VAL 2500.0166
MET 2510.0151
VAL 2520.0145
LEU 2530.0135
SER 2540.0132
ALA 2550.0134
THR 2560.0136
HIS 2570.0133
ARG 2580.0135
TYR 2590.0138
LYS 2600.0162
LYS 2610.0146
LYS 2620.0134
TYR 2630.0129
VAL 2640.0123
THR 2650.0125
THR 2660.0115
LEU 2670.0120
LEU 2680.0112
TYR 2690.0123
LYS 2700.0124
PRO 2710.0145
PRO 5280.0080
GLY 5290.0039
SER 5300.0053
HIS 5310.0063
THR 5320.0088
ILE 5330.0080
GLU 5340.0063
PHE 5350.0086
PHE 5360.0103
GLU 5370.0095
MET 5380.0101
CYS 5390.0125
ALA 5400.0138
ASN 5410.0140
LEU 5420.0153
ILE 5430.0178
LYS 5440.0185
ILE 5450.0209
LEU 5460.0218
ALA 5470.0244
GLN 5480.0291

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.