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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0697
ARG 100.0079
VAL 110.0075
LYS 120.0049
ILE 130.0053
GLY 140.0083
HIS 150.0074
TYR 160.0039
ILE 170.0024
LEU 180.0046
GLY 190.0075
ASP 200.0106
THR 210.0114
LEU 220.0117
GLY 230.0125
VAL 240.0147
GLY 250.0129
THR 260.0137
PHE 270.0141
GLY 280.0122
LYS 290.0117
VAL 300.0099
LYS 310.0086
VAL 320.0078
GLY 330.0050
LYS 340.0065
HIS 350.0078
GLU 360.0074
LEU 370.0120
THR 380.0139
GLY 390.0116
HIS 400.0106
LYS 410.0094
VAL 420.0073
ALA 430.0073
VAL 440.0054
LYS 450.0066
ILE 460.0077
LEU 470.0094
ASN 480.0122
ARG 490.0144
GLN 500.0182
LYS 510.0178
ILE 520.0148
ARG 530.0169
SER 540.0227
LEU 550.0196
ASP 560.0134
VAL 570.0115
VAL 580.0046
GLY 590.0062
LYS 600.0103
ILE 610.0075
ARG 620.0068
ARG 630.0096
GLU 640.0094
ILE 650.0081
GLN 660.0093
ASN 670.0103
LEU 680.0093
LYS 690.0090
LEU 700.0096
PHE 710.0089
ARG 720.0081
HIS 730.0076
PRO 740.0055
HIS 750.0050
ILE 760.0074
ILE 770.0072
LYS 780.0074
LEU 790.0068
TYR 800.0057
GLN 810.0033
VAL 820.0017
ILE 830.0037
SER 840.0071
THR 850.0111
PRO 860.0149
SER 870.0144
ASP 880.0104
ILE 890.0065
PHE 900.0036
MET 910.0039
VAL 920.0041
MET 930.0067
GLU 940.0083
TYR 950.0088
VAL 960.0081
SER 970.0043
GLY 980.0039
GLY 990.0056
GLU 1000.0057
LEU 1010.0050
PHE 1020.0073
ASP 1030.0072
TYR 1040.0060
ILE 1050.0086
CYS 1060.0118
LYS 1070.0105
ASN 1080.0111
GLY 1090.0122
ARG 1100.0103
LEU 1110.0079
ASP 1120.0080
GLU 1130.0061
LYS 1140.0055
GLU 1150.0047
SER 1160.0045
ARG 1170.0027
ARG 1180.0017
LEU 1190.0018
PHE 1200.0033
GLN 1210.0027
GLN 1220.0031
ILE 1230.0045
LEU 1240.0058
SER 1250.0060
GLY 1260.0067
VAL 1270.0081
ASP 1280.0089
TYR 1290.0088
CYS 1300.0091
HIS 1310.0107
ARG 1320.0110
HIS 1330.0101
MET 1340.0105
VAL 1350.0102
VAL 1360.0104
HIS 1370.0101
ARG 1380.0104
ASP 1390.0103
LEU 1400.0092
LYS 1410.0086
PRO 1420.0072
GLU 1430.0081
ASN 1440.0083
VAL 1450.0064
LEU 1460.0053
LEU 1470.0033
ASP 1480.0036
ALA 1490.0024
HIS 1500.0033
MET 1510.0018
ASN 1520.0022
ALA 1530.0034
LYS 1540.0056
ILE 1550.0072
ALA 1560.0080
ASP 1570.0099
PHE 1580.0102
GLY 1590.0102
LEU 1600.0110
SER 1610.0109
ASN 1620.0115
MET 1630.0116
MET 1640.0093
SER 1650.0078
ASP 1660.0048
GLY 1670.0034
GLU 1680.0049
PHE 1690.0068
LEU 1700.0083
ARG 1710.0089
SER 1730.0110
CYS 1740.0116
GLY 1750.0110
SER 1760.0115
PRO 1770.0132
ASN 1780.0118
TYR 1790.0101
ALA 1800.0116
ALA 1810.0118
PRO 1820.0117
GLU 1830.0120
VAL 1840.0113
ILE 1850.0128
SER 1860.0122
GLY 1870.0120
ARG 1880.0078
LEU 1890.0079
TYR 1900.0081
ALA 1910.0066
GLY 1920.0080
PRO 1930.0095
GLU 1940.0099
VAL 1950.0101
ASP 1960.0098
ILE 1970.0094
TRP 1980.0102
SER 1990.0095
SER 2000.0080
GLY 2010.0087
VAL 2020.0094
ILE 2030.0079
LEU 2040.0068
TYR 2050.0091
ALA 2060.0092
LEU 2070.0071
LEU 2080.0084
CYS 2090.0109
GLY 2100.0109
THR 2110.0122
LEU 2120.0117
PRO 2130.0125
PHE 2140.0139
ASP 2150.0150
ASP 2160.0186
ASP 2170.0209
HIS 2180.0227
VAL 2190.0210
PRO 2200.0230
THR 2210.0212
LEU 2220.0177
PHE 2230.0178
LYS 2240.0194
LYS 2250.0169
ILE 2260.0146
CYS 2270.0161
ASP 2280.0165
GLY 2290.0148
ILE 2300.0166
PHE 2310.0151
TYR 2320.0150
THR 2330.0141
PRO 2340.0153
GLN 2350.0155
TYR 2360.0132
LEU 2370.0113
ASN 2380.0092
PRO 2390.0094
SER 2400.0068
VAL 2410.0072
ILE 2420.0098
SER 2430.0097
LEU 2440.0084
LEU 2450.0092
LYS 2460.0114
HIS 2470.0108
MET 2480.0096
LEU 2490.0107
GLN 2500.0118
VAL 2510.0110
ASP 2520.0114
PRO 2530.0109
MET 2540.0099
LYS 2550.0109
ARG 2560.0113
ALA 2570.0108
THR 2580.0108
ILE 2590.0091
LYS 2600.0106
ASP 2610.0095
ILE 2620.0071
ARG 2630.0076
GLU 2640.0078
HIS 2650.0061
GLU 2660.0039
TRP 2670.0032
PHE 2680.0032
LYS 2690.0037
GLN 2700.0022
ASP 2710.0050
LEU 2720.0056
PRO 2730.0098
LYS 2740.0131
TYR 2750.0126
LEU 2760.0098
PHE 2770.0118
PRO 2780.0183
GLU 2790.0194
ASP 2800.0200
ALA 3210.0379
VAL 3220.0321
ALA 3230.0244
TYR 3240.0361
HIS 3250.0281
LEU 3260.0263
ILE 3270.0359
ILE 3280.0348
ASP 3290.0301
ASN 3300.0342
ARG 3310.0334
ARG 3320.0307
ILE 3330.0309
MET 3340.0276
ASN 3350.0311
GLU 3360.0345
ALA 3370.0342
LYS 3380.0403
ASP 3390.0442
PHE 3400.0397
TYR 3410.0381
LEU 3420.0394
ALA 3430.0334
THR 3440.0319
SER 3450.0275
PRO 3460.0221
PRO 3470.0255
ASP 3480.0325
SER 3490.0275
PHE 3500.0250
LEU 3510.0219
ASP 3520.0217
ASP 3530.0336
HIS 3540.0224
HIS 3550.0160
LEU 3560.0116
THR 3570.0173
ARG 3580.0172
PRO 3590.0208
HIS 3600.0224
PRO 3610.0289
GLU 3620.0376
ARG 3630.0421
VAL 3640.0450
PRO 3650.0627
PHE 3660.0614
LEU 3670.0357
VAL 3680.0458
ALA 3690.0697
GLU 3700.0533
THR 3710.0107
PRO 3720.0418
ARG 3730.0381
ALA 3740.0470
ALA 3940.0031
LYS 3950.0033
TRP 3960.0033
HIS 3970.0032
LEU 3980.0033
GLY 3990.0036
ILE 4000.0040
ARG 4010.0050
SER 4020.0063
GLN 4030.0078
SER 4040.0086
ARG 4050.0095
PRO 4060.0089
ASN 4070.0098
ASP 4080.0090
ILE 4090.0071
MET 4100.0077
ALA 4110.0078
GLU 4120.0046
VAL 4130.0050
CYS 4140.0064
ARG 4150.0047
ALA 4160.0040
ILE 4170.0058
LYS 4180.0069
GLN 4190.0059
LEU 4200.0067
ASP 4210.0084
TYR 4220.0081
GLU 4230.0096
TRP 4240.0087
LYS 4250.0101
VAL 4260.0100
VAL 4270.0114
ASN 4280.0110
PRO 4290.0097
TYR 4300.0086
TYR 4310.0087
LEU 4320.0081
ARG 4330.0088
VAL 4340.0076
ARG 4350.0088
ARG 4360.0086
LYS 4370.0112
ASN 4380.0105
PRO 4390.0132
VAL 4400.0142
THR 4410.0145
SER 4420.0145
THR 4430.0127
PHE 4440.0118
SER 4450.0078
LYS 4460.0077
MET 4470.0065
SER 4480.0061
LEU 4490.0054
GLN 4500.0064
LEU 4510.0066
TYR 4520.0057
GLN 4530.0062
VAL 4540.0052
ASP 4550.0068
SER 4560.0086
ARG 4570.0089
THR 4580.0073
TYR 4590.0065
LEU 4600.0051
LEU 4610.0050
ASP 4620.0045
PHE 4630.0044
ARG 4640.0048
SER 4650.0048
ILE 4660.0075
ASP 4670.0105
ASP 4680.0147
GLU 4690.0356
ILE 4700.0490
LYS 2030.0137
SER 2040.0111
PRO 2050.0081
PRO 2060.0047
ILE 2070.0033
LEU 2080.0025
PRO 2090.0024
PRO 2100.0022
HIS 2110.0036
LEU 2120.0024
LEU 2130.0022
GLN 2140.0022
VAL 2150.0057
ILE 2160.0072
LEU 2170.0062
ASN 2180.0071
LYS 2190.0124
ASP 2200.0151
THR 2210.0265
ASN 2220.0231
ILE 2230.0210
SER 2240.0217
CYS 2250.0288
ASP 2260.0345
PRO 2270.0341
ALA 2280.0398
LEU 2290.0386
LEU 2300.0260
PRO 2310.0264
GLU 2320.0240
PRO 2330.0053
ASN 2340.0043
HIS 2350.0024
VAL 2360.0019
MET 2370.0011
LEU 2380.0021
ASN 2390.0034
HIS 2400.0031
LEU 2410.0035
TYR 2420.0029
ALA 2430.0030
LEU 2440.0030
SER 2450.0028
ILE 2460.0022
LYS 2470.0025
ASP 2480.0035
SER 2490.0033
VAL 2500.0025
MET 2510.0023
VAL 2520.0026
LEU 2530.0028
SER 2540.0037
ALA 2550.0034
THR 2560.0040
HIS 2570.0043
ARG 2580.0048
TYR 2590.0074
LYS 2600.0063
LYS 2610.0042
LYS 2620.0060
TYR 2630.0065
VAL 2640.0077
THR 2650.0072
THR 2660.0043
LEU 2670.0037
LEU 2680.0031
TYR 2690.0025
LYS 2700.0025
PRO 2710.0028
PRO 5280.0140
GLY 5290.0085
SER 5300.0049
HIS 5310.0050
THR 5320.0041
ILE 5330.0030
GLU 5340.0042
PHE 5350.0040
PHE 5360.0026
GLU 5370.0033
MET 5380.0039
CYS 5390.0030
ALA 5400.0025
ASN 5410.0033
LEU 5420.0030
ILE 5430.0021
LYS 5440.0022
ILE 5450.0022
LEU 5460.0021
ALA 5470.0025
GLN 5480.0033

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.