CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1510
ARG 100.0215
VAL 110.0173
LYS 120.0150
ILE 130.0103
GLY 140.0116
HIS 150.0126
TYR 160.0107
ILE 170.0149
LEU 180.0131
GLY 190.0166
ASP 200.0170
THR 210.0125
LEU 220.0126
GLY 230.0100
VAL 240.0090
GLY 250.0072
THR 260.0082
PHE 270.0056
GLY 280.0026
LYS 290.0046
VAL 300.0065
LYS 310.0086
VAL 320.0106
GLY 330.0091
LYS 340.0138
HIS 350.0128
GLU 360.0173
LEU 370.0172
THR 380.0167
GLY 390.0180
HIS 400.0128
LYS 410.0114
VAL 420.0076
ALA 430.0074
VAL 440.0044
LYS 450.0032
ILE 460.0017
LEU 470.0026
ASN 480.0057
ARG 490.0107
GLN 500.0100
LYS 510.0068
ILE 520.0086
ARG 530.0126
SER 540.0136
LEU 550.0141
ASP 560.0137
VAL 570.0099
VAL 580.0062
GLY 590.0071
LYS 600.0075
ILE 610.0049
ARG 620.0056
ARG 630.0068
GLU 640.0067
ILE 650.0065
GLN 660.0076
ASN 670.0081
LEU 680.0080
LYS 690.0084
LEU 700.0098
PHE 710.0091
ARG 720.0096
HIS 730.0093
PRO 740.0091
HIS 750.0084
ILE 760.0088
ILE 770.0086
LYS 780.0092
LEU 790.0078
TYR 800.0067
GLN 810.0047
VAL 820.0038
ILE 830.0049
SER 840.0097
THR 850.0147
PRO 860.0192
SER 870.0151
ASP 880.0092
ILE 890.0062
PHE 900.0024
MET 910.0029
VAL 920.0036
MET 930.0064
GLU 940.0080
TYR 950.0083
VAL 960.0098
SER 970.0071
GLY 980.0074
GLY 990.0080
GLU 1000.0089
LEU 1010.0078
PHE 1020.0076
ASP 1030.0102
TYR 1040.0097
ILE 1050.0087
CYS 1060.0107
LYS 1070.0128
ASN 1080.0127
GLY 1090.0120
ARG 1100.0096
LEU 1110.0087
ASP 1120.0090
GLU 1130.0073
LYS 1140.0079
GLU 1150.0074
SER 1160.0058
ARG 1170.0045
ARG 1180.0050
LEU 1190.0053
PHE 1200.0040
GLN 1210.0043
GLN 1220.0061
ILE 1230.0058
LEU 1240.0048
SER 1250.0060
GLY 1260.0069
VAL 1270.0059
ASP 1280.0061
TYR 1290.0072
CYS 1300.0064
HIS 1310.0062
ARG 1320.0070
HIS 1330.0065
MET 1340.0064
VAL 1350.0060
VAL 1360.0060
HIS 1370.0060
ARG 1380.0059
ASP 1390.0067
LEU 1400.0061
LYS 1410.0059
PRO 1420.0064
GLU 1430.0073
ASN 1440.0075
VAL 1450.0073
LEU 1460.0079
LEU 1470.0082
ASP 1480.0082
ALA 1490.0093
HIS 1500.0095
MET 1510.0084
ASN 1520.0080
ALA 1530.0071
LYS 1540.0082
ILE 1550.0078
ALA 1560.0077
ASP 1570.0073
PHE 1580.0075
GLY 1590.0073
LEU 1600.0071
SER 1610.0069
ASN 1620.0069
MET 1630.0069
MET 1640.0053
SER 1650.0062
ASP 1660.0077
GLY 1670.0073
GLU 1680.0070
PHE 1690.0064
LEU 1700.0060
ARG 1710.0062
SER 1730.0072
CYS 1740.0073
GLY 1750.0055
SER 1760.0070
PRO 1770.0067
ASN 1780.0050
TYR 1790.0041
ALA 1800.0051
ALA 1810.0050
PRO 1820.0057
GLU 1830.0064
VAL 1840.0065
ILE 1850.0071
SER 1860.0076
GLY 1870.0079
ARG 1880.0071
LEU 1890.0067
TYR 1900.0057
ALA 1910.0059
GLY 1920.0051
PRO 1930.0041
GLU 1940.0043
VAL 1950.0046
ASP 1960.0037
ILE 1970.0034
TRP 1980.0033
SER 1990.0037
SER 2000.0032
GLY 2010.0023
VAL 2020.0026
ILE 2030.0038
LEU 2040.0035
TYR 2050.0040
ALA 2060.0051
LEU 2070.0060
LEU 2080.0064
CYS 2090.0076
GLY 2100.0082
THR 2110.0066
LEU 2120.0044
PRO 2130.0029
PHE 2140.0024
ASP 2150.0042
ASP 2160.0052
ASP 2170.0077
HIS 2180.0084
VAL 2190.0089
PRO 2200.0095
THR 2210.0068
LEU 2220.0056
PHE 2230.0064
LYS 2240.0066
LYS 2250.0043
ILE 2260.0044
CYS 2270.0064
ASP 2280.0061
GLY 2290.0059
ILE 2300.0059
PHE 2310.0048
TYR 2320.0068
THR 2330.0081
PRO 2340.0107
GLN 2350.0135
TYR 2360.0120
LEU 2370.0096
ASN 2380.0096
PRO 2390.0096
SER 2400.0077
VAL 2410.0058
ILE 2420.0067
SER 2430.0069
LEU 2440.0044
LEU 2450.0037
LYS 2460.0052
HIS 2470.0051
MET 2480.0032
LEU 2490.0034
GLN 2500.0051
VAL 2510.0056
ASP 2520.0066
PRO 2530.0064
MET 2540.0073
LYS 2550.0068
ARG 2560.0055
ALA 2570.0048
THR 2580.0050
ILE 2590.0039
LYS 2600.0050
ASP 2610.0046
ILE 2620.0026
ARG 2630.0020
GLU 2640.0032
HIS 2650.0034
GLU 2660.0044
TRP 2670.0041
PHE 2680.0023
LYS 2690.0020
GLN 2700.0043
ASP 2710.0054
LEU 2720.0053
PRO 2730.0067
LYS 2740.0080
TYR 2750.0077
LEU 2760.0066
PHE 2770.0064
PRO 2780.0082
GLU 2790.0126
ASP 2800.0133
ALA 3210.0534
VAL 3220.0350
ALA 3230.0379
TYR 3240.0246
HIS 3250.0223
LEU 3260.0336
ILE 3270.0443
ILE 3280.0386
ASP 3290.0287
ASN 3300.0320
ARG 3310.0350
ARG 3320.0273
ILE 3330.0221
MET 3340.0228
ASN 3350.0234
GLU 3360.0213
ALA 3370.0158
LYS 3380.0172
ASP 3390.0197
PHE 3400.0167
TYR 3410.0147
LEU 3420.0158
ALA 3430.0126
THR 3440.0124
SER 3450.0151
PRO 3460.0153
PRO 3470.0222
ASP 3480.0161
SER 3490.0126
PHE 3500.0159
LEU 3510.0194
ASP 3520.0212
ASP 3530.0372
HIS 3540.0330
HIS 3550.0335
LEU 3560.0412
THR 3570.0385
ARG 3580.0250
PRO 3590.0123
HIS 3600.0091
PRO 3610.0089
GLU 3620.0149
ARG 3630.0148
VAL 3640.0197
PRO 3650.0254
PHE 3660.0232
LEU 3670.0204
VAL 3680.0252
ALA 3690.0356
GLU 3700.0448
THR 3710.0401
PRO 3720.0303
ARG 3730.0521
ALA 3740.0936
ALA 3940.0034
LYS 3950.0031
TRP 3960.0033
HIS 3970.0030
LEU 3980.0030
GLY 3990.0029
ILE 4000.0015
ARG 4010.0032
SER 4020.0068
GLN 4030.0098
SER 4040.0118
ARG 4050.0118
PRO 4060.0100
ASN 4070.0138
ASP 4080.0153
ILE 4090.0115
MET 4100.0121
ALA 4110.0153
GLU 4120.0128
VAL 4130.0101
CYS 4140.0119
ARG 4150.0124
ALA 4160.0098
ILE 4170.0091
LYS 4180.0110
GLN 4190.0102
LEU 4200.0074
ASP 4210.0075
TYR 4220.0072
GLU 4230.0086
TRP 4240.0107
LYS 4250.0130
VAL 4260.0140
VAL 4270.0151
ASN 4280.0147
PRO 4290.0145
TYR 4300.0101
TYR 4310.0099
LEU 4320.0100
ARG 4330.0089
VAL 4340.0068
ARG 4350.0053
ARG 4360.0041
LYS 4370.0045
ASN 4380.0052
PRO 4390.0072
VAL 4400.0092
THR 4410.0089
SER 4420.0074
THR 4430.0065
PHE 4440.0051
SER 4450.0036
LYS 4460.0033
MET 4470.0047
SER 4480.0071
LEU 4490.0062
GLN 4500.0066
LEU 4510.0048
TYR 4520.0028
GLN 4530.0006
VAL 4540.0031
ASP 4550.0052
SER 4560.0051
ARG 4570.0070
THR 4580.0055
TYR 4590.0031
LEU 4600.0015
LEU 4610.0032
ASP 4620.0037
PHE 4630.0048
ARG 4640.0056
SER 4650.0057
ILE 4660.0115
ASP 4670.0140
ASP 4680.0217
GLU 4690.0988
ILE 4700.1510
LYS 2030.0102
SER 2040.0074
PRO 2050.0062
PRO 2060.0056
ILE 2070.0053
LEU 2080.0058
PRO 2090.0073
PRO 2100.0073
HIS 2110.0074
LEU 2120.0068
LEU 2130.0066
GLN 2140.0071
VAL 2150.0067
ILE 2160.0069
LEU 2170.0054
ASN 2180.0063
LYS 2190.0078
ASP 2200.0085
THR 2210.0083
ASN 2220.0094
ILE 2230.0089
SER 2240.0111
CYS 2250.0139
ASP 2260.0165
PRO 2270.0157
ALA 2280.0186
LEU 2290.0151
LEU 2300.0096
PRO 2310.0094
GLU 2320.0097
PRO 2330.0085
ASN 2340.0078
HIS 2350.0079
VAL 2360.0074
MET 2370.0072
LEU 2380.0075
ASN 2390.0058
HIS 2400.0050
LEU 2410.0040
TYR 2420.0039
ALA 2430.0029
LEU 2440.0029
SER 2450.0042
ILE 2460.0085
LYS 2470.0134
ASP 2480.0194
SER 2490.0161
VAL 2500.0098
MET 2510.0045
VAL 2520.0035
LEU 2530.0025
SER 2540.0039
ALA 2550.0052
THR 2560.0066
HIS 2570.0075
ARG 2580.0098
TYR 2590.0119
LYS 2600.0148
LYS 2610.0149
LYS 2620.0126
TYR 2630.0095
VAL 2640.0081
THR 2650.0069
THR 2660.0054
LEU 2670.0043
LEU 2680.0033
TYR 2690.0049
LYS 2700.0044
PRO 2710.0067
PRO 5280.0087
GLY 5290.0070
SER 5300.0055
HIS 5310.0053
THR 5320.0049
ILE 5330.0044
GLU 5340.0044
PHE 5350.0047
PHE 5360.0037
GLU 5370.0033
MET 5380.0037
CYS 5390.0032
ALA 5400.0031
ASN 5410.0042
LEU 5420.0053
ILE 5430.0052
LYS 5440.0069
ILE 5450.0091
LEU 5460.0091
ALA 5470.0094
GLN 5480.0122

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.