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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1276
ARG 100.0169
VAL 110.0138
LYS 120.0117
ILE 130.0083
GLY 140.0090
HIS 150.0093
TYR 160.0082
ILE 170.0114
LEU 180.0111
GLY 190.0137
ASP 200.0142
THR 210.0116
LEU 220.0104
GLY 230.0088
VAL 240.0084
GLY 250.0063
THR 260.0054
PHE 270.0048
GLY 280.0053
LYS 290.0071
VAL 300.0073
LYS 310.0086
VAL 320.0089
GLY 330.0074
LYS 340.0100
HIS 350.0085
GLU 360.0116
LEU 370.0106
THR 380.0094
GLY 390.0112
HIS 400.0078
LYS 410.0077
VAL 420.0057
ALA 430.0064
VAL 440.0052
LYS 450.0047
ILE 460.0052
LEU 470.0038
ASN 480.0049
ARG 490.0048
GLN 500.0051
LYS 510.0036
ILE 520.0029
ARG 530.0037
SER 540.0031
LEU 550.0031
ASP 560.0038
VAL 570.0028
VAL 580.0028
GLY 590.0026
LYS 600.0030
ILE 610.0032
ARG 620.0032
ARG 630.0033
GLU 640.0035
ILE 650.0037
GLN 660.0037
ASN 670.0042
LEU 680.0043
LYS 690.0046
LEU 700.0056
PHE 710.0052
ARG 720.0054
HIS 730.0043
PRO 740.0033
HIS 750.0028
ILE 760.0042
ILE 770.0045
LYS 780.0051
LEU 790.0045
TYR 800.0037
GLN 810.0024
VAL 820.0012
ILE 830.0040
SER 840.0059
THR 850.0092
PRO 860.0109
SER 870.0093
ASP 880.0064
ILE 890.0041
PHE 900.0040
MET 910.0029
VAL 920.0035
MET 930.0046
GLU 940.0050
TYR 950.0053
VAL 960.0058
SER 970.0031
GLY 980.0047
GLY 990.0069
GLU 1000.0079
LEU 1010.0069
PHE 1020.0080
ASP 1030.0120
TYR 1040.0115
ILE 1050.0115
CYS 1060.0148
LYS 1070.0169
ASN 1080.0174
GLY 1090.0170
ARG 1100.0139
LEU 1110.0129
ASP 1120.0144
GLU 1130.0133
LYS 1140.0137
GLU 1150.0108
SER 1160.0085
ARG 1170.0081
ARG 1180.0055
LEU 1190.0042
PHE 1200.0035
GLN 1210.0030
GLN 1220.0009
ILE 1230.0004
LEU 1240.0019
SER 1250.0019
GLY 1260.0028
VAL 1270.0032
ASP 1280.0038
TYR 1290.0043
CYS 1300.0045
HIS 1310.0048
ARG 1320.0054
HIS 1330.0049
MET 1340.0043
VAL 1350.0040
VAL 1360.0044
HIS 1370.0041
ARG 1380.0040
ASP 1390.0048
LEU 1400.0033
LYS 1410.0031
PRO 1420.0039
GLU 1430.0058
ASN 1440.0051
VAL 1450.0037
LEU 1460.0045
LEU 1470.0041
ASP 1480.0032
ALA 1490.0042
HIS 1500.0035
MET 1510.0052
ASN 1520.0029
ALA 1530.0024
LYS 1540.0034
ILE 1550.0036
ALA 1560.0047
ASP 1570.0046
PHE 1580.0048
GLY 1590.0050
LEU 1600.0043
SER 1610.0041
ASN 1620.0042
MET 1630.0029
MET 1640.0030
SER 1650.0032
ASP 1660.0029
GLY 1670.0029
GLU 1680.0030
PHE 1690.0040
LEU 1700.0045
ARG 1710.0051
SER 1730.0065
CYS 1740.0060
GLY 1750.0045
SER 1760.0064
PRO 1770.0074
ASN 1780.0050
TYR 1790.0028
ALA 1800.0047
ALA 1810.0054
PRO 1820.0067
GLU 1830.0072
VAL 1840.0069
ILE 1850.0080
SER 1860.0087
GLY 1870.0079
ARG 1880.0061
LEU 1890.0051
TYR 1900.0048
ALA 1910.0040
GLY 1920.0042
PRO 1930.0042
GLU 1940.0043
VAL 1950.0043
ASP 1960.0034
ILE 1970.0032
TRP 1980.0033
SER 1990.0021
SER 2000.0010
GLY 2010.0028
VAL 2020.0014
ILE 2030.0026
LEU 2040.0048
TYR 2050.0057
ALA 2060.0068
LEU 2070.0081
LEU 2080.0102
CYS 2090.0111
GLY 2100.0114
THR 2110.0089
LEU 2120.0046
PRO 2130.0023
PHE 2140.0019
ASP 2150.0055
ASP 2160.0088
ASP 2170.0130
HIS 2180.0148
VAL 2190.0137
PRO 2200.0152
THR 2210.0123
LEU 2220.0092
PHE 2230.0096
LYS 2240.0107
LYS 2250.0074
ILE 2260.0067
CYS 2270.0095
ASP 2280.0094
GLY 2290.0085
ILE 2300.0071
PHE 2310.0052
TYR 2320.0081
THR 2330.0117
PRO 2340.0153
GLN 2350.0200
TYR 2360.0187
LEU 2370.0158
ASN 2380.0171
PRO 2390.0174
SER 2400.0160
VAL 2410.0123
ILE 2420.0120
SER 2430.0130
LEU 2440.0099
LEU 2450.0067
LYS 2460.0082
HIS 2470.0084
MET 2480.0055
LEU 2490.0048
GLN 2500.0068
VAL 2510.0074
ASP 2520.0079
PRO 2530.0063
MET 2540.0067
LYS 2550.0068
ARG 2560.0058
ALA 2570.0078
THR 2580.0080
ILE 2590.0066
LYS 2600.0100
ASP 2610.0103
ILE 2620.0083
ARG 2630.0087
GLU 2640.0120
HIS 2650.0119
GLU 2660.0143
TRP 2670.0125
PHE 2680.0095
LYS 2690.0107
GLN 2700.0122
ASP 2710.0107
LEU 2720.0041
PRO 2730.0026
LYS 2740.0016
TYR 2750.0007
LEU 2760.0008
PHE 2770.0019
PRO 2780.0042
GLU 2790.0122
ASP 2800.0107
ALA 3210.0687
VAL 3220.0862
ALA 3230.0547
TYR 3240.0431
HIS 3250.0267
LEU 3260.0676
ILE 3270.0927
ILE 3280.0607
ASP 3290.0445
ASN 3300.0813
ARG 3310.0754
ARG 3320.0396
ILE 3330.0398
MET 3340.0431
ASN 3350.0396
GLU 3360.0230
ALA 3370.0128
LYS 3380.0182
ASP 3390.0097
PHE 3400.0061
TYR 3410.0100
LEU 3420.0097
ALA 3430.0113
THR 3440.0169
SER 3450.0222
PRO 3460.0269
PRO 3470.0328
ASP 3480.0105
SER 3490.0055
PHE 3500.0240
LEU 3510.0250
ASP 3520.0210
ASP 3530.0392
HIS 3540.0435
HIS 3550.0519
LEU 3560.0613
THR 3570.0474
ARG 3580.0220
PRO 3590.0197
HIS 3600.0151
PRO 3610.0210
GLU 3620.0237
ARG 3630.0248
VAL 3640.0302
PRO 3650.0313
PHE 3660.0274
LEU 3670.0345
VAL 3680.0289
ALA 3690.0122
GLU 3700.0386
THR 3710.0591
PRO 3720.0531
ARG 3730.1020
ALA 3740.1276
ALA 3940.0013
LYS 3950.0009
TRP 3960.0005
HIS 3970.0012
LEU 3980.0019
GLY 3990.0024
ILE 4000.0042
ARG 4010.0053
SER 4020.0065
GLN 4030.0085
SER 4040.0079
ARG 4050.0067
PRO 4060.0048
ASN 4070.0041
ASP 4080.0060
ILE 4090.0053
MET 4100.0041
ALA 4110.0052
GLU 4120.0061
VAL 4130.0050
CYS 4140.0048
ARG 4150.0060
ALA 4160.0056
ILE 4170.0046
LYS 4180.0054
GLN 4190.0059
LEU 4200.0048
ASP 4210.0046
TYR 4220.0035
GLU 4230.0030
TRP 4240.0028
LYS 4250.0021
VAL 4260.0017
VAL 4270.0007
ASN 4280.0005
PRO 4290.0012
TYR 4300.0017
TYR 4310.0012
LEU 4320.0014
ARG 4330.0011
VAL 4340.0017
ARG 4350.0016
ARG 4360.0019
LYS 4370.0017
ASN 4380.0019
PRO 4390.0026
VAL 4400.0025
THR 4410.0019
SER 4420.0014
THR 4430.0013
PHE 4440.0013
SER 4450.0014
LYS 4460.0014
MET 4470.0017
SER 4480.0014
LEU 4490.0018
GLN 4500.0019
LEU 4510.0023
TYR 4520.0036
GLN 4530.0050
VAL 4540.0066
ASP 4550.0088
SER 4560.0097
ARG 4570.0092
THR 4580.0079
TYR 4590.0056
LEU 4600.0041
LEU 4610.0033
ASP 4620.0027
PHE 4630.0024
ARG 4640.0020
SER 4650.0018
ILE 4660.0008
ASP 4670.0020
ASP 4680.0038
GLU 4690.0130
ILE 4700.0197
LYS 2030.0022
SER 2040.0031
PRO 2050.0030
PRO 2060.0037
ILE 2070.0047
LEU 2080.0044
PRO 2090.0042
PRO 2100.0038
HIS 2110.0032
LEU 2120.0021
LEU 2130.0019
GLN 2140.0010
VAL 2150.0012
ILE 2160.0014
LEU 2170.0016
ASN 2180.0040
LYS 2190.0084
ASP 2200.0141
THR 2210.0184
ASN 2220.0194
ILE 2230.0203
SER 2240.0145
CYS 2250.0102
ASP 2260.0090
PRO 2270.0161
ALA 2280.0111
LEU 2290.0069
LEU 2300.0062
PRO 2310.0075
GLU 2320.0069
PRO 2330.0019
ASN 2340.0017
HIS 2350.0023
VAL 2360.0023
MET 2370.0020
LEU 2380.0022
ASN 2390.0022
HIS 2400.0023
LEU 2410.0023
TYR 2420.0015
ALA 2430.0016
LEU 2440.0015
SER 2450.0017
ILE 2460.0044
LYS 2470.0074
ASP 2480.0111
SER 2490.0095
VAL 2500.0066
MET 2510.0037
VAL 2520.0033
LEU 2530.0024
SER 2540.0019
ALA 2550.0021
THR 2560.0021
HIS 2570.0029
ARG 2580.0036
TYR 2590.0045
LYS 2600.0059
LYS 2610.0052
LYS 2620.0039
TYR 2630.0032
VAL 2640.0024
THR 2650.0015
THR 2660.0027
LEU 2670.0027
LEU 2680.0030
TYR 2690.0043
LYS 2700.0041
PRO 2710.0051
PRO 5280.0041
GLY 5290.0033
SER 5300.0028
HIS 5310.0020
THR 5320.0023
ILE 5330.0025
GLU 5340.0022
PHE 5350.0021
PHE 5360.0025
GLU 5370.0025
MET 5380.0024
CYS 5390.0029
ALA 5400.0038
ASN 5410.0038
LEU 5420.0041
ILE 5430.0049
LYS 5440.0057
ILE 5450.0061
LEU 5460.0062
ALA 5470.0071
GLN 5480.0091

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.