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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1219
ARG 100.0190
VAL 110.0148
LYS 120.0106
ILE 130.0069
GLY 140.0089
HIS 150.0055
TYR 160.0032
ILE 170.0086
LEU 180.0094
GLY 190.0142
ASP 200.0163
THR 210.0131
LEU 220.0135
GLY 230.0110
VAL 240.0104
GLY 250.0073
THR 260.0076
PHE 270.0052
GLY 280.0035
LYS 290.0060
VAL 300.0072
LYS 310.0084
VAL 320.0091
GLY 330.0057
LYS 340.0076
HIS 350.0037
GLU 360.0062
LEU 370.0031
THR 380.0075
GLY 390.0103
HIS 400.0098
LYS 410.0099
VAL 420.0079
ALA 430.0075
VAL 440.0044
LYS 450.0039
ILE 460.0015
LEU 470.0014
ASN 480.0043
ARG 490.0082
GLN 500.0073
LYS 510.0030
ILE 520.0055
ARG 530.0087
SER 540.0075
LEU 550.0091
ASP 560.0111
VAL 570.0087
VAL 580.0071
GLY 590.0082
LYS 600.0076
ILE 610.0058
ARG 620.0062
ARG 630.0068
GLU 640.0068
ILE 650.0067
GLN 660.0074
ASN 670.0078
LEU 680.0078
LYS 690.0079
LEU 700.0084
PHE 710.0084
ARG 720.0091
HIS 730.0084
PRO 740.0082
HIS 750.0084
ILE 760.0088
ILE 770.0089
LYS 780.0092
LEU 790.0090
TYR 800.0084
GLN 810.0068
VAL 820.0065
ILE 830.0057
SER 840.0090
THR 850.0127
PRO 860.0168
SER 870.0129
ASP 880.0073
ILE 890.0053
PHE 900.0020
MET 910.0045
VAL 920.0051
MET 930.0077
GLU 940.0092
TYR 950.0093
VAL 960.0107
SER 970.0092
GLY 980.0090
GLY 990.0095
GLU 1000.0094
LEU 1010.0086
PHE 1020.0090
ASP 1030.0101
TYR 1040.0091
ILE 1050.0091
CYS 1060.0102
LYS 1070.0104
ASN 1080.0094
GLY 1090.0088
ARG 1100.0079
LEU 1110.0070
ASP 1120.0063
GLU 1130.0050
LYS 1140.0055
GLU 1150.0062
SER 1160.0060
ARG 1170.0050
ARG 1180.0054
LEU 1190.0064
PHE 1200.0059
GLN 1210.0052
GLN 1220.0062
ILE 1230.0070
LEU 1240.0061
SER 1250.0061
GLY 1260.0068
VAL 1270.0065
ASP 1280.0060
TYR 1290.0066
CYS 1300.0063
HIS 1310.0058
ARG 1320.0056
HIS 1330.0058
MET 1340.0052
VAL 1350.0054
VAL 1360.0060
HIS 1370.0060
ARG 1380.0059
ASP 1390.0070
LEU 1400.0067
LYS 1410.0068
PRO 1420.0078
GLU 1430.0083
ASN 1440.0083
VAL 1450.0085
LEU 1460.0089
LEU 1470.0089
ASP 1480.0093
ALA 1490.0099
HIS 1500.0096
MET 1510.0085
ASN 1520.0083
ALA 1530.0083
LYS 1540.0087
ILE 1550.0083
ALA 1560.0082
ASP 1570.0071
PHE 1580.0073
GLY 1590.0069
LEU 1600.0061
SER 1610.0064
ASN 1620.0065
MET 1630.0052
MET 1640.0039
SER 1650.0037
ASP 1660.0022
GLY 1670.0030
GLU 1680.0025
PHE 1690.0017
LEU 1700.0021
ARG 1710.0018
SER 1730.0045
CYS 1740.0047
GLY 1750.0047
SER 1760.0072
PRO 1770.0092
ASN 1780.0080
TYR 1790.0058
ALA 1800.0064
ALA 1810.0062
PRO 1820.0065
GLU 1830.0058
VAL 1840.0048
ILE 1850.0058
SER 1860.0059
GLY 1870.0040
ARG 1880.0020
LEU 1890.0020
TYR 1900.0021
ALA 1910.0021
GLY 1920.0025
PRO 1930.0035
GLU 1940.0042
VAL 1950.0042
ASP 1960.0045
ILE 1970.0049
TRP 1980.0054
SER 1990.0055
SER 2000.0053
GLY 2010.0053
VAL 2020.0058
ILE 2030.0062
LEU 2040.0055
TYR 2050.0058
ALA 2060.0069
LEU 2070.0066
LEU 2080.0058
CYS 2090.0064
GLY 2100.0081
THR 2110.0080
LEU 2120.0077
PRO 2130.0072
PHE 2140.0088
ASP 2150.0115
ASP 2160.0153
ASP 2170.0184
HIS 2180.0200
VAL 2190.0171
PRO 2200.0183
THR 2210.0175
LEU 2220.0140
PHE 2230.0126
LYS 2240.0145
LYS 2250.0129
ILE 2260.0104
CYS 2270.0113
ASP 2280.0120
GLY 2290.0095
ILE 2300.0093
PHE 2310.0075
TYR 2320.0062
THR 2330.0049
PRO 2340.0049
GLN 2350.0045
TYR 2360.0048
LEU 2370.0042
ASN 2380.0034
PRO 2390.0028
SER 2400.0027
VAL 2410.0034
ILE 2420.0039
SER 2430.0040
LEU 2440.0042
LEU 2450.0048
LYS 2460.0054
HIS 2470.0054
MET 2480.0051
LEU 2490.0056
GLN 2500.0061
VAL 2510.0066
ASP 2520.0066
PRO 2530.0056
MET 2540.0051
LYS 2550.0054
ARG 2560.0052
ALA 2570.0049
THR 2580.0050
ILE 2590.0051
LYS 2600.0045
ASP 2610.0043
ILE 2620.0041
ARG 2630.0032
GLU 2640.0030
HIS 2650.0030
GLU 2660.0027
TRP 2670.0029
PHE 2680.0033
LYS 2690.0024
GLN 2700.0021
ASP 2710.0022
LEU 2720.0053
PRO 2730.0031
LYS 2740.0032
TYR 2750.0040
LEU 2760.0041
PHE 2770.0047
PRO 2780.0160
GLU 2790.0222
ASP 2800.0211
ALA 3210.1219
VAL 3220.0868
ALA 3230.0683
TYR 3240.0626
HIS 3250.0291
LEU 3260.0669
ILE 3270.1209
ILE 3280.0975
ASP 3290.0503
ASN 3300.0834
ARG 3310.0874
ARG 3320.0473
ILE 3330.0356
MET 3340.0393
ASN 3350.0373
GLU 3360.0162
ALA 3370.0057
LYS 3380.0112
ASP 3390.0154
PHE 3400.0129
TYR 3410.0056
LEU 3420.0074
ALA 3430.0053
THR 3440.0105
SER 3450.0192
PRO 3460.0232
PRO 3470.0304
ASP 3480.0250
SER 3490.0190
PHE 3500.0309
LEU 3510.0324
ASP 3520.0220
ASP 3530.0283
HIS 3540.0320
HIS 3550.0362
LEU 3560.0389
THR 3570.0274
ARG 3580.0140
PRO 3590.0048
HIS 3600.0031
PRO 3610.0074
GLU 3620.0105
ARG 3630.0086
VAL 3640.0106
PRO 3650.0122
PHE 3660.0105
LEU 3670.0139
VAL 3680.0118
ALA 3690.0127
GLU 3700.0261
THR 3710.0296
PRO 3720.0189
ARG 3730.0414
ALA 3740.0687
ALA 3940.0116
LYS 3950.0107
TRP 3960.0095
HIS 3970.0086
LEU 3980.0066
GLY 3990.0060
ILE 4000.0054
ARG 4010.0050
SER 4020.0049
GLN 4030.0057
SER 4040.0063
ARG 4050.0066
PRO 4060.0063
ASN 4070.0076
ASP 4080.0078
ILE 4090.0068
MET 4100.0077
ALA 4110.0087
GLU 4120.0084
VAL 4130.0080
CYS 4140.0093
ARG 4150.0096
ALA 4160.0088
ILE 4170.0095
LYS 4180.0108
GLN 4190.0102
LEU 4200.0100
ASP 4210.0106
TYR 4220.0103
GLU 4230.0107
TRP 4240.0106
LYS 4250.0110
VAL 4260.0102
VAL 4270.0104
ASN 4280.0095
PRO 4290.0090
TYR 4300.0072
TYR 4310.0077
LEU 4320.0084
ARG 4330.0089
VAL 4340.0089
ARG 4350.0094
ARG 4360.0088
LYS 4370.0126
ASN 4380.0147
PRO 4390.0194
VAL 4400.0228
THR 4410.0227
SER 4420.0186
THR 4430.0160
PHE 4440.0116
SER 4450.0100
LYS 4460.0086
MET 4470.0081
SER 4480.0074
LEU 4490.0065
GLN 4500.0061
LEU 4510.0044
TYR 4520.0041
GLN 4530.0039
VAL 4540.0046
ASP 4550.0048
SER 4560.0049
ARG 4570.0052
THR 4580.0048
TYR 4590.0046
LEU 4600.0045
LEU 4610.0048
ASP 4620.0052
PHE 4630.0062
ARG 4640.0064
SER 4650.0066
ILE 4660.0124
ASP 4670.0119
ASP 4680.0095
GLU 4690.0571
ILE 4700.0905
LYS 2030.0066
SER 2040.0057
PRO 2050.0054
PRO 2060.0039
ILE 2070.0037
LEU 2080.0037
PRO 2090.0023
PRO 2100.0024
HIS 2110.0017
LEU 2120.0039
LEU 2130.0042
GLN 2140.0040
VAL 2150.0070
ILE 2160.0068
LEU 2170.0079
ASN 2180.0101
LYS 2190.0102
ASP 2200.0122
THR 2210.0085
ASN 2220.0092
ILE 2230.0066
SER 2240.0053
CYS 2250.0042
ASP 2260.0050
PRO 2270.0058
ALA 2280.0068
LEU 2290.0020
LEU 2300.0032
PRO 2310.0048
GLU 2320.0046
PRO 2330.0053
ASN 2340.0040
HIS 2350.0025
VAL 2360.0037
MET 2370.0048
LEU 2380.0047
ASN 2390.0054
HIS 2400.0057
LEU 2410.0063
TYR 2420.0073
ALA 2430.0085
LEU 2440.0098
SER 2450.0120
ILE 2460.0125
LYS 2470.0132
ASP 2480.0146
SER 2490.0136
VAL 2500.0119
MET 2510.0098
VAL 2520.0092
LEU 2530.0081
SER 2540.0079
ALA 2550.0069
THR 2560.0061
HIS 2570.0051
ARG 2580.0033
TYR 2590.0015
LYS 2600.0028
LYS 2610.0036
LYS 2620.0033
TYR 2630.0037
VAL 2640.0043
THR 2650.0058
THR 2660.0076
LEU 2670.0078
LEU 2680.0080
TYR 2690.0095
LYS 2700.0096
PRO 2710.0114
PRO 5280.0307
GLY 5290.0219
SER 5300.0159
HIS 5310.0115
THR 5320.0100
ILE 5330.0091
GLU 5340.0100
PHE 5350.0087
PHE 5360.0071
GLU 5370.0081
MET 5380.0080
CYS 5390.0070
ALA 5400.0071
ASN 5410.0075
LEU 5420.0072
ILE 5430.0066
LYS 5440.0065
ILE 5450.0075
LEU 5460.0072
ALA 5470.0070
GLN 5480.0076

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.