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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0913
ARG 100.0115
VAL 110.0088
LYS 120.0093
ILE 130.0065
GLY 140.0094
HIS 150.0123
TYR 160.0098
ILE 170.0108
LEU 180.0083
GLY 190.0109
ASP 200.0120
THR 210.0096
LEU 220.0125
GLY 230.0126
VAL 240.0134
GLY 250.0137
THR 260.0156
PHE 270.0142
GLY 280.0106
LYS 290.0085
VAL 300.0093
LYS 310.0080
VAL 320.0105
GLY 330.0094
LYS 340.0132
HIS 350.0143
GLU 360.0168
LEU 370.0197
THR 380.0205
GLY 390.0191
HIS 400.0153
LYS 410.0131
VAL 420.0104
ALA 430.0098
VAL 440.0071
LYS 450.0075
ILE 460.0057
LEU 470.0081
ASN 480.0088
ARG 490.0138
GLN 500.0156
LYS 510.0160
ILE 520.0164
ARG 530.0192
SER 540.0250
LEU 550.0242
ASP 560.0196
VAL 570.0167
VAL 580.0092
GLY 590.0110
LYS 600.0138
ILE 610.0106
ARG 620.0114
ARG 630.0127
GLU 640.0116
ILE 650.0113
GLN 660.0130
ASN 670.0129
LEU 680.0116
LYS 690.0126
LEU 700.0140
PHE 710.0123
ARG 720.0123
HIS 730.0120
PRO 740.0112
HIS 750.0095
ILE 760.0100
ILE 770.0096
LYS 780.0112
LEU 790.0106
TYR 800.0099
GLN 810.0080
VAL 820.0061
ILE 830.0013
SER 840.0056
THR 850.0095
PRO 860.0144
SER 870.0118
ASP 880.0074
ILE 890.0058
PHE 900.0033
MET 910.0068
VAL 920.0072
MET 930.0098
GLU 940.0115
TYR 950.0111
VAL 960.0097
SER 970.0076
GLY 980.0073
GLY 990.0042
GLU 1000.0023
LEU 1010.0030
PHE 1020.0035
ASP 1030.0068
TYR 1040.0076
ILE 1050.0087
CYS 1060.0142
LYS 1070.0154
ASN 1080.0160
GLY 1090.0149
ARG 1100.0109
LEU 1110.0086
ASP 1120.0088
GLU 1130.0055
LYS 1140.0081
GLU 1150.0074
SER 1160.0038
ARG 1170.0034
ARG 1180.0065
LEU 1190.0049
PHE 1200.0038
GLN 1210.0070
GLN 1220.0080
ILE 1230.0066
LEU 1240.0076
SER 1250.0094
GLY 1260.0093
VAL 1270.0085
ASP 1280.0100
TYR 1290.0108
CYS 1300.0091
HIS 1310.0102
ARG 1320.0114
HIS 1330.0099
MET 1340.0101
VAL 1350.0094
VAL 1360.0086
HIS 1370.0081
ARG 1380.0080
ASP 1390.0071
LEU 1400.0061
LYS 1410.0044
PRO 1420.0019
GLU 1430.0023
ASN 1440.0041
VAL 1450.0043
LEU 1460.0046
LEU 1470.0069
ASP 1480.0091
ALA 1490.0127
HIS 1500.0144
MET 1510.0099
ASN 1520.0092
ALA 1530.0063
LYS 1540.0077
ILE 1550.0075
ALA 1560.0068
ASP 1570.0085
PHE 1580.0096
GLY 1590.0096
LEU 1600.0098
SER 1610.0099
ASN 1620.0108
MET 1630.0109
MET 1640.0076
SER 1650.0048
ASP 1660.0029
GLY 1670.0036
GLU 1680.0021
PHE 1690.0027
LEU 1700.0052
ARG 1710.0080
SER 1730.0088
CYS 1740.0094
GLY 1750.0079
SER 1760.0067
PRO 1770.0093
ASN 1780.0080
TYR 1790.0065
ALA 1800.0085
ALA 1810.0094
PRO 1820.0097
GLU 1830.0100
VAL 1840.0088
ILE 1850.0103
SER 1860.0104
GLY 1870.0103
ARG 1880.0085
LEU 1890.0068
TYR 1900.0056
ALA 1910.0032
GLY 1920.0052
PRO 1930.0067
GLU 1940.0075
VAL 1950.0077
ASP 1960.0073
ILE 1970.0078
TRP 1980.0081
SER 1990.0065
SER 2000.0054
GLY 2010.0062
VAL 2020.0062
ILE 2030.0038
LEU 2040.0028
TYR 2050.0060
ALA 2060.0064
LEU 2070.0044
LEU 2080.0061
CYS 2090.0095
GLY 2100.0100
THR 2110.0110
LEU 2120.0097
PRO 2130.0107
PHE 2140.0121
ASP 2150.0139
ASP 2160.0180
ASP 2170.0200
HIS 2180.0221
VAL 2190.0190
PRO 2200.0222
THR 2210.0211
LEU 2220.0164
PHE 2230.0163
LYS 2240.0192
LYS 2250.0165
ILE 2260.0135
CYS 2270.0155
ASP 2280.0167
GLY 2290.0145
ILE 2300.0169
PHE 2310.0145
TYR 2320.0145
THR 2330.0129
PRO 2340.0149
GLN 2350.0152
TYR 2360.0122
LEU 2370.0092
ASN 2380.0060
PRO 2390.0066
SER 2400.0041
VAL 2410.0042
ILE 2420.0077
SER 2430.0089
LEU 2440.0075
LEU 2450.0076
LYS 2460.0107
HIS 2470.0108
MET 2480.0088
LEU 2490.0096
GLN 2500.0116
VAL 2510.0099
ASP 2520.0107
PRO 2530.0101
MET 2540.0084
LYS 2550.0115
ARG 2560.0120
ALA 2570.0110
THR 2580.0116
ILE 2590.0103
LYS 2600.0131
ASP 2610.0115
ILE 2620.0089
ARG 2630.0102
GLU 2640.0108
HIS 2650.0082
GLU 2660.0067
TRP 2670.0040
PHE 2680.0058
LYS 2690.0081
GLN 2700.0069
ASP 2710.0092
LEU 2720.0083
PRO 2730.0098
LYS 2740.0104
TYR 2750.0128
LEU 2760.0114
PHE 2770.0126
PRO 2780.0154
GLU 2790.0148
ASP 2800.0144
ALA 3210.0591
VAL 3220.0400
ALA 3230.0208
TYR 3240.0391
HIS 3250.0235
LEU 3260.0243
ILE 3270.0599
ILE 3280.0532
ASP 3290.0245
ASN 3300.0395
ARG 3310.0406
ARG 3320.0220
ILE 3330.0220
MET 3340.0172
ASN 3350.0114
GLU 3360.0119
ALA 3370.0128
LYS 3380.0124
ASP 3390.0120
PHE 3400.0137
TYR 3410.0112
LEU 3420.0117
ALA 3430.0104
THR 3440.0078
SER 3450.0063
PRO 3460.0049
PRO 3470.0096
ASP 3480.0227
SER 3490.0142
PHE 3500.0264
LEU 3510.0217
ASP 3520.0223
ASP 3530.0291
HIS 3540.0111
HIS 3550.0132
LEU 3560.0109
THR 3570.0124
ARG 3580.0141
PRO 3590.0129
HIS 3600.0149
PRO 3610.0163
GLU 3620.0131
ARG 3630.0097
VAL 3640.0115
PRO 3650.0158
PHE 3660.0211
LEU 3670.0120
VAL 3680.0165
ALA 3690.0355
GLU 3700.0314
THR 3710.0160
PRO 3720.0337
ARG 3730.0375
ALA 3740.0193
ALA 3940.0174
LYS 3950.0164
TRP 3960.0151
HIS 3970.0136
LEU 3980.0123
GLY 3990.0107
ILE 4000.0103
ARG 4010.0107
SER 4020.0107
GLN 4030.0111
SER 4040.0122
ARG 4050.0159
PRO 4060.0153
ASN 4070.0175
ASP 4080.0164
ILE 4090.0130
MET 4100.0131
ALA 4110.0150
GLU 4120.0126
VAL 4130.0093
CYS 4140.0097
ARG 4150.0116
ALA 4160.0089
ILE 4170.0068
LYS 4180.0101
GLN 4190.0125
LEU 4200.0105
ASP 4210.0109
TYR 4220.0062
GLU 4230.0040
TRP 4240.0065
LYS 4250.0108
VAL 4260.0153
VAL 4270.0177
ASN 4280.0194
PRO 4290.0191
TYR 4300.0157
TYR 4310.0144
LEU 4320.0117
ARG 4330.0118
VAL 4340.0069
ARG 4350.0071
ARG 4360.0060
LYS 4370.0198
ASN 4380.0298
PRO 4390.0475
VAL 4400.0600
THR 4410.0592
SER 4420.0433
THR 4430.0364
PHE 4440.0230
SER 4450.0160
LYS 4460.0141
MET 4470.0132
SER 4480.0110
LEU 4490.0104
GLN 4500.0130
LEU 4510.0115
TYR 4520.0121
GLN 4530.0127
VAL 4540.0145
ASP 4550.0151
SER 4560.0159
ARG 4570.0139
THR 4580.0126
TYR 4590.0122
LEU 4600.0116
LEU 4610.0104
ASP 4620.0110
PHE 4630.0106
ARG 4640.0126
SER 4650.0130
ILE 4660.0191
ASP 4670.0221
ASP 4680.0221
GLU 4690.0354
ILE 4700.0627
LYS 2030.0174
SER 2040.0156
PRO 2050.0140
PRO 2060.0116
ILE 2070.0110
LEU 2080.0112
PRO 2090.0081
PRO 2100.0090
HIS 2110.0083
LEU 2120.0102
LEU 2130.0119
GLN 2140.0118
VAL 2150.0139
ILE 2160.0141
LEU 2170.0147
ASN 2180.0143
LYS 2190.0118
ASP 2200.0104
THR 2210.0103
ASN 2220.0092
ILE 2230.0108
SER 2240.0142
CYS 2250.0165
ASP 2260.0192
PRO 2270.0167
ALA 2280.0194
LEU 2290.0166
LEU 2300.0118
PRO 2310.0092
GLU 2320.0090
PRO 2330.0103
ASN 2340.0069
HIS 2350.0046
VAL 2360.0065
MET 2370.0090
LEU 2380.0085
ASN 2390.0111
HIS 2400.0112
LEU 2410.0114
TYR 2420.0121
ALA 2430.0126
LEU 2440.0139
SER 2450.0132
ILE 2460.0106
LYS 2470.0120
ASP 2480.0109
SER 2490.0096
VAL 2500.0110
MET 2510.0100
VAL 2520.0121
LEU 2530.0110
SER 2540.0135
ALA 2550.0130
THR 2560.0128
HIS 2570.0124
ARG 2580.0097
TYR 2590.0095
LYS 2600.0082
LYS 2610.0070
LYS 2620.0083
TYR 2630.0100
VAL 2640.0119
THR 2650.0130
THR 2660.0148
LEU 2670.0137
LEU 2680.0118
TYR 2690.0130
LYS 2700.0107
PRO 2710.0099
PRO 5280.0913
GLY 5290.0588
SER 5300.0358
HIS 5310.0226
THR 5320.0188
ILE 5330.0148
GLU 5340.0159
PHE 5350.0123
PHE 5360.0080
GLU 5370.0096
MET 5380.0070
CYS 5390.0047
ALA 5400.0060
ASN 5410.0061
LEU 5420.0037
ILE 5430.0033
LYS 5440.0059
ILE 5450.0076
LEU 5460.0068
ALA 5470.0068
GLN 5480.0090

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.