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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
ARG 100.0370
VAL 110.0289
LYS 120.0202
ILE 130.0127
GLY 140.0160
HIS 150.0099
TYR 160.0071
ILE 170.0168
LEU 180.0198
GLY 190.0293
ASP 200.0337
THR 210.0281
LEU 220.0281
GLY 230.0231
VAL 240.0216
GLY 250.0143
THR 260.0139
PHE 270.0113
GLY 280.0103
LYS 290.0150
VAL 300.0165
LYS 310.0193
VAL 320.0196
GLY 330.0130
LYS 340.0153
HIS 350.0080
GLU 360.0101
LEU 370.0049
THR 380.0151
GLY 390.0193
HIS 400.0193
LYS 410.0195
VAL 420.0157
ALA 430.0156
VAL 440.0108
LYS 450.0095
ILE 460.0076
LEU 470.0038
ASN 480.0045
ARG 490.0058
GLN 500.0053
LYS 510.0024
ILE 520.0062
ARG 530.0089
SER 540.0088
LEU 550.0131
ASP 560.0155
VAL 570.0122
VAL 580.0095
GLY 590.0096
LYS 600.0094
ILE 610.0082
ARG 620.0084
ARG 630.0074
GLU 640.0087
ILE 650.0088
GLN 660.0090
ASN 670.0089
LEU 680.0098
LYS 690.0109
LEU 700.0124
PHE 710.0115
ARG 720.0132
HIS 730.0124
PRO 740.0117
HIS 750.0107
ILE 760.0119
ILE 770.0131
LYS 780.0146
LEU 790.0140
TYR 800.0134
GLN 810.0100
VAL 820.0067
ILE 830.0036
SER 840.0085
THR 850.0150
PRO 860.0203
SER 870.0153
ASP 880.0074
ILE 890.0025
PHE 900.0024
MET 910.0076
VAL 920.0096
MET 930.0138
GLU 940.0165
TYR 950.0171
VAL 960.0184
SER 970.0151
GLY 980.0135
GLY 990.0153
GLU 1000.0143
LEU 1010.0118
PHE 1020.0132
ASP 1030.0182
TYR 1040.0160
ILE 1050.0162
CYS 1060.0209
LYS 1070.0226
ASN 1080.0216
GLY 1090.0216
ARG 1100.0175
LEU 1110.0149
ASP 1120.0157
GLU 1130.0129
LYS 1140.0131
GLU 1150.0112
SER 1160.0090
ARG 1170.0062
ARG 1180.0043
LEU 1190.0055
PHE 1200.0037
GLN 1210.0027
GLN 1220.0057
ILE 1230.0064
LEU 1240.0046
SER 1250.0066
GLY 1260.0080
VAL 1270.0064
ASP 1280.0069
TYR 1290.0086
CYS 1300.0067
HIS 1310.0062
ARG 1320.0078
HIS 1330.0062
MET 1340.0046
VAL 1350.0032
VAL 1360.0045
HIS 1370.0042
ARG 1380.0039
ASP 1390.0078
LEU 1400.0067
LYS 1410.0069
PRO 1420.0086
GLU 1430.0106
ASN 1440.0105
VAL 1450.0103
LEU 1460.0122
LEU 1470.0121
ASP 1480.0138
ALA 1490.0154
HIS 1500.0135
MET 1510.0111
ASN 1520.0100
ALA 1530.0096
LYS 1540.0112
ILE 1550.0101
ALA 1560.0109
ASP 1570.0085
PHE 1580.0085
GLY 1590.0085
LEU 1600.0050
SER 1610.0049
ASN 1620.0051
MET 1630.0034
MET 1640.0039
SER 1650.0046
ASP 1660.0071
GLY 1670.0070
GLU 1680.0070
PHE 1690.0048
LEU 1700.0046
ARG 1710.0048
SER 1730.0041
CYS 1740.0041
GLY 1750.0034
SER 1760.0132
PRO 1770.0170
ASN 1780.0140
TYR 1790.0062
ALA 1800.0080
ALA 1810.0075
PRO 1820.0094
GLU 1830.0066
VAL 1840.0055
ILE 1850.0096
SER 1860.0077
GLY 1870.0020
ARG 1880.0029
LEU 1890.0044
TYR 1900.0035
ALA 1910.0033
GLY 1920.0012
PRO 1930.0021
GLU 1940.0028
VAL 1950.0029
ASP 1960.0024
ILE 1970.0030
TRP 1980.0044
SER 1990.0047
SER 2000.0032
GLY 2010.0019
VAL 2020.0041
ILE 2030.0056
LEU 2040.0044
TYR 2050.0052
ALA 2060.0095
LEU 2070.0100
LEU 2080.0106
CYS 2090.0129
GLY 2100.0161
THR 2110.0134
LEU 2120.0110
PRO 2130.0068
PHE 2140.0128
ASP 2150.0237
ASP 2160.0363
ASP 2170.0479
HIS 2180.0510
VAL 2190.0415
PRO 2200.0427
THR 2210.0406
LEU 2220.0308
PHE 2230.0254
LYS 2240.0306
LYS 2250.0264
ILE 2260.0187
CYS 2270.0212
ASP 2280.0229
GLY 2290.0165
ILE 2300.0135
PHE 2310.0063
TYR 2320.0020
THR 2330.0083
PRO 2340.0149
GLN 2350.0216
TYR 2360.0200
LEU 2370.0156
ASN 2380.0166
PRO 2390.0163
SER 2400.0145
VAL 2410.0098
ILE 2420.0087
SER 2430.0100
LEU 2440.0065
LEU 2450.0022
LYS 2460.0051
HIS 2470.0057
MET 2480.0039
LEU 2490.0051
GLN 2500.0073
VAL 2510.0105
ASP 2520.0098
PRO 2530.0070
MET 2540.0064
LYS 2550.0068
ARG 2560.0056
ALA 2570.0054
THR 2580.0065
ILE 2590.0052
LYS 2600.0096
ASP 2610.0084
ILE 2620.0057
ARG 2630.0069
GLU 2640.0102
HIS 2650.0096
GLU 2660.0123
TRP 2670.0099
PHE 2680.0064
LYS 2690.0085
GLN 2700.0097
ASP 2710.0080
LEU 2720.0010
PRO 2730.0041
LYS 2740.0074
TYR 2750.0090
LEU 2760.0080
PHE 2770.0092
PRO 2780.0110
GLU 2790.0117
ASP 2800.0117
ALA 3210.0597
VAL 3220.0345
ALA 3230.0112
TYR 3240.0275
HIS 3250.0351
LEU 3260.0338
ILE 3270.0399
ILE 3280.0442
ASP 3290.0330
ASN 3300.0312
ARG 3310.0292
ARG 3320.0195
ILE 3330.0170
MET 3340.0171
ASN 3350.0135
GLU 3360.0135
ALA 3370.0130
LYS 3380.0098
ASP 3390.0080
PHE 3400.0114
TYR 3410.0069
LEU 3420.0060
ALA 3430.0082
THR 3440.0074
SER 3450.0075
PRO 3460.0076
PRO 3470.0069
ASP 3480.0114
SER 3490.0094
PHE 3500.0123
LEU 3510.0079
ASP 3520.0111
ASP 3530.0158
HIS 3540.0111
HIS 3550.0147
LEU 3560.0124
THR 3570.0103
ARG 3580.0087
PRO 3590.0075
HIS 3600.0097
PRO 3610.0115
GLU 3620.0094
ARG 3630.0056
VAL 3640.0075
PRO 3650.0086
PHE 3660.0095
LEU 3670.0062
VAL 3680.0106
ALA 3690.0204
GLU 3700.0176
THR 3710.0111
PRO 3720.0245
ARG 3730.0279
ALA 3740.0111
ALA 3940.0125
LYS 3950.0111
TRP 3960.0109
HIS 3970.0102
LEU 3980.0101
GLY 3990.0107
ILE 4000.0139
ARG 4010.0167
SER 4020.0192
GLN 4030.0241
SER 4040.0232
ARG 4050.0230
PRO 4060.0190
ASN 4070.0150
ASP 4080.0155
ILE 4090.0146
MET 4100.0094
ALA 4110.0072
GLU 4120.0135
VAL 4130.0106
CYS 4140.0072
ARG 4150.0139
ALA 4160.0136
ILE 4170.0089
LYS 4180.0132
GLN 4190.0162
LEU 4200.0125
ASP 4210.0131
TYR 4220.0083
GLU 4230.0091
TRP 4240.0059
LYS 4250.0084
VAL 4260.0079
VAL 4270.0126
ASN 4280.0133
PRO 4290.0121
TYR 4300.0131
TYR 4310.0113
LEU 4320.0073
ARG 4330.0075
VAL 4340.0048
ARG 4350.0061
ARG 4360.0059
LYS 4370.0094
ASN 4380.0077
PRO 4390.0129
VAL 4400.0122
THR 4410.0129
SER 4420.0143
THR 4430.0116
PHE 4440.0096
SER 4450.0071
LYS 4460.0076
MET 4470.0082
SER 4480.0088
LEU 4490.0090
GLN 4500.0117
LEU 4510.0127
TYR 4520.0149
GLN 4530.0179
VAL 4540.0189
ASP 4550.0248
SER 4560.0293
ARG 4570.0277
THR 4580.0232
TYR 4590.0185
LEU 4600.0145
LEU 4610.0121
ASP 4620.0109
PHE 4630.0096
ARG 4640.0100
SER 4650.0091
ILE 4660.0100
ASP 4670.0055
ASP 4680.0074
GLU 4690.0366
ILE 4700.0653
LYS 2030.0267
SER 2040.0237
PRO 2050.0179
PRO 2060.0138
ILE 2070.0129
LEU 2080.0119
PRO 2090.0061
PRO 2100.0051
HIS 2110.0049
LEU 2120.0078
LEU 2130.0077
GLN 2140.0071
VAL 2150.0100
ILE 2160.0105
LEU 2170.0107
ASN 2180.0108
LYS 2190.0083
ASP 2200.0075
THR 2210.0079
ASN 2220.0071
ILE 2230.0078
SER 2240.0089
CYS 2250.0106
ASP 2260.0120
PRO 2270.0112
ALA 2280.0123
LEU 2290.0105
LEU 2300.0093
PRO 2310.0089
GLU 2320.0093
PRO 2330.0093
ASN 2340.0081
HIS 2350.0070
VAL 2360.0079
MET 2370.0081
LEU 2380.0093
ASN 2390.0106
HIS 2400.0103
LEU 2410.0098
TYR 2420.0107
ALA 2430.0110
LEU 2440.0122
SER 2450.0114
ILE 2460.0208
LYS 2470.0392
ASP 2480.0585
SER 2490.0472
VAL 2500.0322
MET 2510.0171
VAL 2520.0173
LEU 2530.0129
SER 2540.0130
ALA 2550.0129
THR 2560.0136
HIS 2570.0138
ARG 2580.0141
TYR 2590.0161
LYS 2600.0174
LYS 2610.0166
LYS 2620.0164
TYR 2630.0152
VAL 2640.0155
THR 2650.0147
THR 2660.0185
LEU 2670.0182
LEU 2680.0173
TYR 2690.0229
LYS 2700.0195
PRO 2710.0233
PRO 5280.0127
GLY 5290.0088
SER 5300.0120
HIS 5310.0105
THR 5320.0119
ILE 5330.0101
GLU 5340.0071
PHE 5350.0079
PHE 5360.0093
GLU 5370.0070
MET 5380.0049
CYS 5390.0073
ALA 5400.0100
ASN 5410.0090
LEU 5420.0092
ILE 5430.0140
LYS 5440.0163
ILE 5450.0177
LEU 5460.0178
ALA 5470.0242
GLN 5480.0328

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.