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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0908
ARG 100.0126
VAL 110.0121
LYS 120.0130
ILE 130.0120
GLY 140.0191
HIS 150.0199
TYR 160.0128
ILE 170.0099
LEU 180.0050
GLY 190.0032
ASP 200.0052
THR 210.0057
LEU 220.0074
GLY 230.0068
VAL 240.0071
GLY 250.0049
THR 260.0043
PHE 270.0051
GLY 280.0049
LYS 290.0049
VAL 300.0052
LYS 310.0045
VAL 320.0065
GLY 330.0073
LYS 340.0112
HIS 350.0171
GLU 360.0181
LEU 370.0248
THR 380.0244
GLY 390.0183
HIS 400.0179
LYS 410.0131
VAL 420.0100
ALA 430.0068
VAL 440.0053
LYS 450.0047
ILE 460.0039
LEU 470.0043
ASN 480.0046
ARG 490.0050
GLN 500.0054
LYS 510.0053
ILE 520.0053
ARG 530.0061
SER 540.0063
LEU 550.0062
ASP 560.0064
VAL 570.0056
VAL 580.0061
GLY 590.0053
LYS 600.0047
ILE 610.0046
ARG 620.0046
ARG 630.0039
GLU 640.0038
ILE 650.0039
GLN 660.0036
ASN 670.0032
LEU 680.0033
LYS 690.0034
LEU 700.0028
PHE 710.0026
ARG 720.0029
HIS 730.0024
PRO 740.0029
HIS 750.0022
ILE 760.0029
ILE 770.0037
LYS 780.0037
LEU 790.0051
TYR 800.0049
GLN 810.0040
VAL 820.0040
ILE 830.0039
SER 840.0040
THR 850.0045
PRO 860.0048
SER 870.0048
ASP 880.0037
ILE 890.0039
PHE 900.0034
MET 910.0041
VAL 920.0049
MET 930.0060
GLU 940.0075
TYR 950.0088
VAL 960.0073
SER 970.0045
GLY 980.0045
GLY 990.0043
GLU 1000.0021
LEU 1010.0019
PHE 1020.0023
ASP 1030.0025
TYR 1040.0016
ILE 1050.0019
CYS 1060.0027
LYS 1070.0021
ASN 1080.0013
GLY 1090.0022
ARG 1100.0022
LEU 1110.0019
ASP 1120.0024
GLU 1130.0028
LYS 1140.0025
GLU 1150.0016
SER 1160.0017
ARG 1170.0021
ARG 1180.0015
LEU 1190.0009
PHE 1200.0013
GLN 1210.0017
GLN 1220.0013
ILE 1230.0009
LEU 1240.0013
SER 1250.0016
GLY 1260.0014
VAL 1270.0014
ASP 1280.0016
TYR 1290.0015
CYS 1300.0015
HIS 1310.0017
ARG 1320.0017
HIS 1330.0014
MET 1340.0015
VAL 1350.0017
VAL 1360.0021
HIS 1370.0022
ARG 1380.0024
ASP 1390.0024
LEU 1400.0022
LYS 1410.0022
PRO 1420.0012
GLU 1430.0015
ASN 1440.0013
VAL 1450.0022
LEU 1460.0025
LEU 1470.0026
ASP 1480.0031
ALA 1490.0032
HIS 1500.0018
MET 1510.0016
ASN 1520.0014
ALA 1530.0013
LYS 1540.0024
ILE 1550.0023
ALA 1560.0026
ASP 1570.0026
PHE 1580.0026
GLY 1590.0029
LEU 1600.0029
SER 1610.0027
ASN 1620.0027
MET 1630.0019
MET 1640.0018
SER 1650.0020
ASP 1660.0024
GLY 1670.0023
GLU 1680.0024
PHE 1690.0029
LEU 1700.0029
ARG 1710.0031
SER 1730.0031
CYS 1740.0037
GLY 1750.0037
SER 1760.0066
PRO 1770.0063
ASN 1780.0059
TYR 1790.0027
ALA 1800.0029
ALA 1810.0020
PRO 1820.0011
GLU 1830.0012
VAL 1840.0021
ILE 1850.0034
SER 1860.0014
GLY 1870.0038
ARG 1880.0036
LEU 1890.0036
TYR 1900.0027
ALA 1910.0018
GLY 1920.0017
PRO 1930.0017
GLU 1940.0017
VAL 1950.0018
ASP 1960.0019
ILE 1970.0016
TRP 1980.0016
SER 1990.0022
SER 2000.0020
GLY 2010.0017
VAL 2020.0020
ILE 2030.0020
LEU 2040.0020
TYR 2050.0020
ALA 2060.0019
LEU 2070.0019
LEU 2080.0024
CYS 2090.0024
GLY 2100.0024
THR 2110.0022
LEU 2120.0040
PRO 2130.0032
PHE 2140.0053
ASP 2150.0107
ASP 2160.0185
ASP 2170.0260
HIS 2180.0252
VAL 2190.0195
PRO 2200.0171
THR 2210.0172
LEU 2220.0131
PHE 2230.0089
LYS 2240.0109
LYS 2250.0109
ILE 2260.0062
CYS 2270.0058
ASP 2280.0077
GLY 2290.0054
ILE 2300.0057
PHE 2310.0040
TYR 2320.0030
THR 2330.0028
PRO 2340.0038
GLN 2350.0050
TYR 2360.0044
LEU 2370.0039
ASN 2380.0042
PRO 2390.0044
SER 2400.0042
VAL 2410.0035
ILE 2420.0030
SER 2430.0030
LEU 2440.0028
LEU 2450.0020
LYS 2460.0018
HIS 2470.0017
MET 2480.0011
LEU 2490.0014
GLN 2500.0009
VAL 2510.0016
ASP 2520.0016
PRO 2530.0012
MET 2540.0016
LYS 2550.0014
ARG 2560.0009
ALA 2570.0021
THR 2580.0020
ILE 2590.0020
LYS 2600.0027
ASP 2610.0029
ILE 2620.0028
ARG 2630.0040
GLU 2640.0045
HIS 2650.0041
GLU 2660.0048
TRP 2670.0040
PHE 2680.0036
LYS 2690.0045
GLN 2700.0042
ASP 2710.0040
LEU 2720.0039
PRO 2730.0056
LYS 2740.0084
TYR 2750.0074
LEU 2760.0053
PHE 2770.0059
PRO 2780.0101
GLU 2790.0129
ASP 2800.0144
ALA 3210.0365
VAL 3220.0354
ALA 3230.0203
TYR 3240.0256
HIS 3250.0323
LEU 3260.0307
ILE 3270.0297
ILE 3280.0311
ASP 3290.0255
ASN 3300.0253
ARG 3310.0248
ARG 3320.0187
ILE 3330.0170
MET 3340.0162
ASN 3350.0189
GLU 3360.0191
ALA 3370.0178
LYS 3380.0211
ASP 3390.0219
PHE 3400.0203
TYR 3410.0206
LEU 3420.0207
ALA 3430.0180
THR 3440.0158
SER 3450.0166
PRO 3460.0133
PRO 3470.0155
ASP 3480.0581
SER 3490.0338
PHE 3500.0313
LEU 3510.0327
ASP 3520.0416
ASP 3530.0581
HIS 3540.0123
HIS 3550.0161
LEU 3560.0072
THR 3570.0185
ARG 3580.0193
PRO 3590.0206
HIS 3600.0223
PRO 3610.0292
GLU 3620.0326
ARG 3630.0258
VAL 3640.0216
PRO 3650.0213
PHE 3660.0185
LEU 3670.0250
VAL 3680.0121
ALA 3690.0482
GLU 3700.0654
THR 3710.0413
PRO 3720.0598
ARG 3730.0522
ALA 3740.0908
ALA 3940.0063
LYS 3950.0062
TRP 3960.0050
HIS 3970.0065
LEU 3980.0053
GLY 3990.0050
ILE 4000.0064
ARG 4010.0070
SER 4020.0071
GLN 4030.0087
SER 4040.0057
ARG 4050.0056
PRO 4060.0062
ASN 4070.0074
ASP 4080.0054
ILE 4090.0045
MET 4100.0064
ALA 4110.0080
GLU 4120.0068
VAL 4130.0059
CYS 4140.0086
ARG 4150.0092
ALA 4160.0075
ILE 4170.0079
LYS 4180.0108
GLN 4190.0108
LEU 4200.0089
ASP 4210.0105
TYR 4220.0084
GLU 4230.0097
TRP 4240.0101
LYS 4250.0123
VAL 4260.0134
VAL 4270.0140
ASN 4280.0132
PRO 4290.0115
TYR 4300.0083
TYR 4310.0085
LEU 4320.0081
ARG 4330.0089
VAL 4340.0068
ARG 4350.0056
ARG 4360.0062
LYS 4370.0061
ASN 4380.0136
PRO 4390.0286
VAL 4400.0367
THR 4410.0343
SER 4420.0208
THR 4430.0166
PHE 4440.0086
SER 4450.0040
LYS 4460.0051
MET 4470.0056
SER 4480.0058
LEU 4490.0052
GLN 4500.0065
LEU 4510.0051
TYR 4520.0070
GLN 4530.0091
VAL 4540.0103
ASP 4550.0132
SER 4560.0147
ARG 4570.0124
THR 4580.0105
TYR 4590.0077
LEU 4600.0061
LEU 4610.0046
ASP 4620.0046
PHE 4630.0046
ARG 4640.0053
SER 4650.0053
ILE 4660.0082
ASP 4670.0087
ASP 4680.0092
GLU 4690.0048
ILE 4700.0103
LYS 2030.0133
SER 2040.0112
PRO 2050.0078
PRO 2060.0071
ILE 2070.0076
LEU 2080.0068
PRO 2090.0034
PRO 2100.0034
HIS 2110.0029
LEU 2120.0021
LEU 2130.0020
GLN 2140.0019
VAL 2150.0046
ILE 2160.0053
LEU 2170.0037
ASN 2180.0058
LYS 2190.0120
ASP 2200.0163
THR 2210.0198
ASN 2220.0130
ILE 2230.0152
SER 2240.0145
CYS 2250.0161
ASP 2260.0219
PRO 2270.0263
ALA 2280.0271
LEU 2290.0225
LEU 2300.0186
PRO 2310.0185
GLU 2320.0173
PRO 2330.0044
ASN 2340.0031
HIS 2350.0013
VAL 2360.0014
MET 2370.0017
LEU 2380.0029
ASN 2390.0042
HIS 2400.0041
LEU 2410.0042
TYR 2420.0042
ALA 2430.0054
LEU 2440.0063
SER 2450.0093
ILE 2460.0093
LYS 2470.0113
ASP 2480.0129
SER 2490.0115
VAL 2500.0095
MET 2510.0068
VAL 2520.0056
LEU 2530.0039
SER 2540.0040
ALA 2550.0035
THR 2560.0028
HIS 2570.0039
ARG 2580.0048
TYR 2590.0077
LYS 2600.0079
LYS 2610.0077
LYS 2620.0070
TYR 2630.0066
VAL 2640.0064
THR 2650.0041
THR 2660.0034
LEU 2670.0035
LEU 2680.0042
TYR 2690.0057
LYS 2700.0066
PRO 2710.0095
PRO 5280.0669
GLY 5290.0404
SER 5300.0180
HIS 5310.0078
THR 5320.0061
ILE 5330.0043
GLU 5340.0045
PHE 5350.0033
PHE 5360.0023
GLU 5370.0014
MET 5380.0009
CYS 5390.0013
ALA 5400.0029
ASN 5410.0036
LEU 5420.0032
ILE 5430.0034
LYS 5440.0060
ILE 5450.0060
LEU 5460.0041
ALA 5470.0052
GLN 5480.0072

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.