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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1072
ARG 100.0066
VAL 110.0060
LYS 120.0074
ILE 130.0064
GLY 140.0093
HIS 150.0107
TYR 160.0083
ILE 170.0076
LEU 180.0061
GLY 190.0066
ASP 200.0068
THR 210.0059
LEU 220.0066
GLY 230.0064
VAL 240.0060
GLY 250.0053
THR 260.0049
PHE 270.0055
GLY 280.0048
LYS 290.0050
VAL 300.0054
LYS 310.0054
VAL 320.0067
GLY 330.0067
LYS 340.0086
HIS 350.0107
GLU 360.0112
LEU 370.0141
THR 380.0140
GLY 390.0116
HIS 400.0103
LYS 410.0082
VAL 420.0068
ALA 430.0058
VAL 440.0048
LYS 450.0043
ILE 460.0044
LEU 470.0044
ASN 480.0045
ARG 490.0047
GLN 500.0054
LYS 510.0057
ILE 520.0052
ARG 530.0051
SER 540.0061
LEU 550.0062
ASP 560.0055
VAL 570.0047
VAL 580.0043
GLY 590.0033
LYS 600.0025
ILE 610.0025
ARG 620.0025
ARG 630.0018
GLU 640.0019
ILE 650.0019
GLN 660.0015
ASN 670.0015
LEU 680.0013
LYS 690.0014
LEU 700.0015
PHE 710.0012
ARG 720.0016
HIS 730.0023
PRO 740.0023
HIS 750.0020
ILE 760.0024
ILE 770.0025
LYS 780.0027
LEU 790.0035
TYR 800.0034
GLN 810.0030
VAL 820.0032
ILE 830.0033
SER 840.0034
THR 850.0039
PRO 860.0040
SER 870.0045
ASP 880.0038
ILE 890.0036
PHE 900.0037
MET 910.0034
VAL 920.0039
MET 930.0044
GLU 940.0047
TYR 950.0051
VAL 960.0042
SER 970.0038
GLY 980.0033
GLY 990.0025
GLU 1000.0017
LEU 1010.0018
PHE 1020.0025
ASP 1030.0042
TYR 1040.0043
ILE 1050.0050
CYS 1060.0077
LYS 1070.0080
ASN 1080.0081
GLY 1090.0072
ARG 1100.0062
LEU 1110.0047
ASP 1120.0047
GLU 1130.0039
LYS 1140.0030
GLU 1150.0029
SER 1160.0029
ARG 1170.0020
ARG 1180.0010
LEU 1190.0013
PHE 1200.0011
GLN 1210.0009
GLN 1220.0011
ILE 1230.0008
LEU 1240.0008
SER 1250.0015
GLY 1260.0013
VAL 1270.0007
ASP 1280.0011
TYR 1290.0012
CYS 1300.0003
HIS 1310.0006
ARG 1320.0008
HIS 1330.0008
MET 1340.0021
VAL 1350.0010
VAL 1360.0019
HIS 1370.0016
ARG 1380.0015
ASP 1390.0023
LEU 1400.0020
LYS 1410.0018
PRO 1420.0013
GLU 1430.0013
ASN 1440.0006
VAL 1450.0010
LEU 1460.0016
LEU 1470.0025
ASP 1480.0034
ALA 1490.0050
HIS 1500.0053
MET 1510.0036
ASN 1520.0027
ALA 1530.0016
LYS 1540.0019
ILE 1550.0014
ALA 1560.0011
ASP 1570.0009
PHE 1580.0007
GLY 1590.0008
LEU 1600.0013
SER 1610.0013
ASN 1620.0015
MET 1630.0038
MET 1640.0043
SER 1650.0063
ASP 1660.0099
GLY 1670.0094
GLU 1680.0093
PHE 1690.0081
LEU 1700.0065
ARG 1710.0049
SER 1730.0031
CYS 1740.0033
GLY 1750.0031
SER 1760.0054
PRO 1770.0051
ASN 1780.0041
TYR 1790.0026
ALA 1800.0031
ALA 1810.0027
PRO 1820.0022
GLU 1830.0029
VAL 1840.0032
ILE 1850.0036
SER 1860.0020
GLY 1870.0041
ARG 1880.0055
LEU 1890.0064
TYR 1900.0059
ALA 1910.0068
GLY 1920.0045
PRO 1930.0027
GLU 1940.0032
VAL 1950.0030
ASP 1960.0022
ILE 1970.0023
TRP 1980.0022
SER 1990.0022
SER 2000.0019
GLY 2010.0023
VAL 2020.0024
ILE 2030.0022
LEU 2040.0027
TYR 2050.0035
ALA 2060.0039
LEU 2070.0036
LEU 2080.0046
CYS 2090.0056
GLY 2100.0052
THR 2110.0047
LEU 2120.0025
PRO 2130.0032
PHE 2140.0033
ASP 2150.0066
ASP 2160.0146
ASP 2170.0221
HIS 2180.0218
VAL 2190.0176
PRO 2200.0157
THR 2210.0140
LEU 2220.0100
PHE 2230.0074
LYS 2240.0080
LYS 2250.0075
ILE 2260.0032
CYS 2270.0035
ASP 2280.0042
GLY 2290.0042
ILE 2300.0044
PHE 2310.0035
TYR 2320.0045
THR 2330.0067
PRO 2340.0083
GLN 2350.0101
TYR 2360.0080
LEU 2370.0069
ASN 2380.0064
PRO 2390.0069
SER 2400.0057
VAL 2410.0048
ILE 2420.0054
SER 2430.0054
LEU 2440.0040
LEU 2450.0031
LYS 2460.0036
HIS 2470.0032
MET 2480.0024
LEU 2490.0023
GLN 2500.0023
VAL 2510.0019
ASP 2520.0034
PRO 2530.0043
MET 2540.0056
LYS 2550.0042
ARG 2560.0034
ALA 2570.0031
THR 2580.0023
ILE 2590.0017
LYS 2600.0030
ASP 2610.0033
ILE 2620.0028
ARG 2630.0031
GLU 2640.0041
HIS 2650.0040
GLU 2660.0044
TRP 2670.0037
PHE 2680.0027
LYS 2690.0031
GLN 2700.0026
ASP 2710.0017
LEU 2720.0016
PRO 2730.0019
LYS 2740.0034
TYR 2750.0036
LEU 2760.0028
PHE 2770.0035
PRO 2780.0070
GLU 2790.0066
ASP 2800.0061
ALA 3210.0445
VAL 3220.0396
ALA 3230.0244
TYR 3240.0179
HIS 3250.0238
LEU 3260.0306
ILE 3270.0251
ILE 3280.0234
ASP 3290.0171
ASN 3300.0113
ARG 3310.0141
ARG 3320.0063
ILE 3330.0177
MET 3340.0229
ASN 3350.0263
GLU 3360.0257
ALA 3370.0266
LYS 3380.0273
ASP 3390.0246
PHE 3400.0253
TYR 3410.0251
LEU 3420.0207
ALA 3430.0202
THR 3440.0209
SER 3450.0294
PRO 3460.0289
PRO 3470.0379
ASP 3480.0565
SER 3490.0328
PHE 3500.0161
LEU 3510.0381
ASP 3520.0256
ASP 3530.0266
HIS 3540.0421
HIS 3550.0306
LEU 3560.0294
THR 3570.0295
ARG 3580.0339
PRO 3590.0202
HIS 3600.0202
PRO 3610.0179
GLU 3620.0126
ARG 3630.0052
VAL 3640.0069
PRO 3650.0128
PHE 3660.0108
LEU 3670.0074
VAL 3680.0135
ALA 3690.0120
GLU 3700.0118
THR 3710.0118
PRO 3720.0153
ARG 3730.0177
ALA 3740.0221
ALA 3940.0252
LYS 3950.0264
TRP 3960.0211
HIS 3970.0209
LEU 3980.0165
GLY 3990.0091
ILE 4000.0106
ARG 4010.0102
SER 4020.0136
GLN 4030.0207
SER 4040.0235
ARG 4050.0242
PRO 4060.0188
ASN 4070.0226
ASP 4080.0241
ILE 4090.0170
MET 4100.0160
ALA 4110.0180
GLU 4120.0157
VAL 4130.0154
CYS 4140.0157
ARG 4150.0166
ALA 4160.0144
ILE 4170.0147
LYS 4180.0175
GLN 4190.0152
LEU 4200.0120
ASP 4210.0143
TYR 4220.0142
GLU 4230.0172
TRP 4240.0189
LYS 4250.0217
VAL 4260.0238
VAL 4270.0269
ASN 4280.0259
PRO 4290.0250
TYR 4300.0167
TYR 4310.0168
LEU 4320.0167
ARG 4330.0176
VAL 4340.0149
ARG 4350.0143
ARG 4360.0125
LYS 4370.0107
ASN 4380.0112
PRO 4390.0170
VAL 4400.0218
THR 4410.0215
SER 4420.0148
THR 4430.0148
PHE 4440.0140
SER 4450.0120
LYS 4460.0127
MET 4470.0121
SER 4480.0131
LEU 4490.0104
GLN 4500.0110
LEU 4510.0079
TYR 4520.0076
GLN 4530.0071
VAL 4540.0096
ASP 4550.0114
SER 4560.0116
ARG 4570.0163
THR 4580.0138
TYR 4590.0093
LEU 4600.0071
LEU 4610.0066
ASP 4620.0090
PHE 4630.0084
ARG 4640.0104
SER 4650.0110
ILE 4660.0150
ASP 4670.0128
ASP 4680.0107
GLU 4690.0102
ILE 4700.0292
LYS 2030.0215
SER 2040.0169
PRO 2050.0132
PRO 2060.0102
ILE 2070.0091
LEU 2080.0106
PRO 2090.0095
PRO 2100.0098
HIS 2110.0105
LEU 2120.0130
LEU 2130.0139
GLN 2140.0164
VAL 2150.0206
ILE 2160.0186
LEU 2170.0156
ASN 2180.0229
LYS 2190.0238
ASP 2200.0223
THR 2210.0228
ASN 2220.0202
ILE 2230.0146
SER 2240.0223
CYS 2250.0261
ASP 2260.0252
PRO 2270.0206
ALA 2280.0243
LEU 2290.0248
LEU 2300.0176
PRO 2310.0174
GLU 2320.0157
PRO 2330.0123
ASN 2340.0106
HIS 2350.0098
VAL 2360.0114
MET 2370.0114
LEU 2380.0114
ASN 2390.0114
HIS 2400.0111
LEU 2410.0093
TYR 2420.0118
ALA 2430.0132
LEU 2440.0176
SER 2450.0367
ILE 2460.0523
LYS 2470.0703
ASP 2480.1072
SER 2490.0908
VAL 2500.0551
MET 2510.0259
VAL 2520.0177
LEU 2530.0090
SER 2540.0067
ALA 2550.0077
THR 2560.0091
HIS 2570.0077
ARG 2580.0073
TYR 2590.0084
LYS 2600.0170
LYS 2610.0095
LYS 2620.0069
TYR 2630.0063
VAL 2640.0048
THR 2650.0042
THR 2660.0064
LEU 2670.0061
LEU 2680.0097
TYR 2690.0230
LYS 2700.0250
PRO 2710.0397
PRO 5280.0441
GLY 5290.0274
SER 5300.0129
HIS 5310.0099
THR 5320.0091
ILE 5330.0078
GLU 5340.0081
PHE 5350.0079
PHE 5360.0074
GLU 5370.0058
MET 5380.0073
CYS 5390.0082
ALA 5400.0058
ASN 5410.0047
LEU 5420.0074
ILE 5430.0081
LYS 5440.0035
ILE 5450.0063
LEU 5460.0085
ALA 5470.0103
GLN 5480.0137

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.