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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0617
ARG 100.0376
VAL 110.0323
LYS 120.0198
ILE 130.0256
GLY 140.0340
HIS 150.0249
TYR 160.0128
ILE 170.0056
LEU 180.0129
GLY 190.0220
ASP 200.0230
THR 210.0149
LEU 220.0154
GLY 230.0114
VAL 240.0107
GLY 250.0120
THR 260.0129
PHE 270.0125
GLY 280.0052
LYS 290.0056
VAL 300.0065
LYS 310.0085
VAL 320.0095
GLY 330.0068
LYS 340.0199
HIS 350.0301
GLU 360.0289
LEU 370.0524
THR 380.0617
GLY 390.0477
HIS 400.0346
LYS 410.0230
VAL 420.0134
ALA 430.0077
VAL 440.0058
LYS 450.0059
ILE 460.0074
LEU 470.0081
ASN 480.0113
ARG 490.0224
GLN 500.0175
LYS 510.0131
ILE 520.0223
ARG 530.0349
SER 540.0412
LEU 550.0454
ASP 560.0452
VAL 570.0294
VAL 580.0219
GLY 590.0177
LYS 600.0137
ILE 610.0066
ARG 620.0053
ARG 630.0025
GLU 640.0037
ILE 650.0030
GLN 660.0026
ASN 670.0041
LEU 680.0044
LYS 690.0040
LEU 700.0039
PHE 710.0038
ARG 720.0046
HIS 730.0071
PRO 740.0089
HIS 750.0079
ILE 760.0057
ILE 770.0063
LYS 780.0074
LEU 790.0116
TYR 800.0122
GLN 810.0117
VAL 820.0136
ILE 830.0124
SER 840.0203
THR 850.0346
PRO 860.0466
SER 870.0344
ASP 880.0191
ILE 890.0149
PHE 900.0094
MET 910.0089
VAL 920.0087
MET 930.0097
GLU 940.0066
TYR 950.0042
VAL 960.0033
SER 970.0088
GLY 980.0078
GLY 990.0074
GLU 1000.0086
LEU 1010.0079
PHE 1020.0079
ASP 1030.0126
TYR 1040.0123
ILE 1050.0119
CYS 1060.0183
LYS 1070.0201
ASN 1080.0191
GLY 1090.0169
ARG 1100.0145
LEU 1110.0109
ASP 1120.0104
GLU 1130.0073
LYS 1140.0076
GLU 1150.0087
SER 1160.0079
ARG 1170.0060
ARG 1180.0080
LEU 1190.0080
PHE 1200.0059
GLN 1210.0069
GLN 1220.0083
ILE 1230.0068
LEU 1240.0054
SER 1250.0073
GLY 1260.0062
VAL 1270.0043
ASP 1280.0058
TYR 1290.0052
CYS 1300.0032
HIS 1310.0047
ARG 1320.0060
HIS 1330.0049
MET 1340.0060
VAL 1350.0039
VAL 1360.0020
HIS 1370.0015
ARG 1380.0014
ASP 1390.0017
LEU 1400.0019
LYS 1410.0017
PRO 1420.0028
GLU 1430.0045
ASN 1440.0039
VAL 1450.0051
LEU 1460.0064
LEU 1470.0081
ASP 1480.0081
ALA 1490.0121
HIS 1500.0140
MET 1510.0119
ASN 1520.0103
ALA 1530.0080
LYS 1540.0065
ILE 1550.0054
ALA 1560.0051
ASP 1570.0048
PHE 1580.0032
GLY 1590.0039
LEU 1600.0030
SER 1610.0026
ASN 1620.0025
MET 1630.0055
MET 1640.0061
SER 1650.0079
ASP 1660.0088
GLY 1670.0072
GLU 1680.0061
PHE 1690.0042
LEU 1700.0043
ARG 1710.0035
SER 1730.0016
CYS 1740.0014
GLY 1750.0019
SER 1760.0072
PRO 1770.0102
ASN 1780.0085
TYR 1790.0040
ALA 1800.0033
ALA 1810.0016
PRO 1820.0038
GLU 1830.0033
VAL 1840.0025
ILE 1850.0057
SER 1860.0065
GLY 1870.0043
ARG 1880.0019
LEU 1890.0019
TYR 1900.0031
ALA 1910.0053
GLY 1920.0040
PRO 1930.0032
GLU 1940.0025
VAL 1950.0023
ASP 1960.0021
ILE 1970.0027
TRP 1980.0023
SER 1990.0032
SER 2000.0038
GLY 2010.0037
VAL 2020.0047
ILE 2030.0065
LEU 2040.0060
TYR 2050.0076
ALA 2060.0097
LEU 2070.0094
LEU 2080.0097
CYS 2090.0137
GLY 2100.0155
THR 2110.0138
LEU 2120.0094
PRO 2130.0048
PHE 2140.0053
ASP 2150.0173
ASP 2160.0273
ASP 2170.0380
HIS 2180.0411
VAL 2190.0328
PRO 2200.0342
THR 2210.0305
LEU 2220.0216
PHE 2230.0173
LYS 2240.0211
LYS 2250.0161
ILE 2260.0099
CYS 2270.0129
ASP 2280.0131
GLY 2290.0081
ILE 2300.0034
PHE 2310.0035
TYR 2320.0093
THR 2330.0130
PRO 2340.0189
GLN 2350.0232
TYR 2360.0173
LEU 2370.0139
ASN 2380.0123
PRO 2390.0125
SER 2400.0090
VAL 2410.0072
ILE 2420.0094
SER 2430.0083
LEU 2440.0051
LEU 2450.0050
LYS 2460.0046
HIS 2470.0037
MET 2480.0023
LEU 2490.0020
GLN 2500.0010
VAL 2510.0028
ASP 2520.0029
PRO 2530.0022
MET 2540.0022
LYS 2550.0013
ARG 2560.0015
ALA 2570.0034
THR 2580.0041
ILE 2590.0048
LYS 2600.0070
ASP 2610.0063
ILE 2620.0048
ARG 2630.0077
GLU 2640.0086
HIS 2650.0062
GLU 2660.0072
TRP 2670.0048
PHE 2680.0049
LYS 2690.0074
GLN 2700.0059
ASP 2710.0085
LEU 2720.0114
PRO 2730.0171
LYS 2740.0204
TYR 2750.0202
LEU 2760.0160
PHE 2770.0157
PRO 2780.0231
GLU 2790.0256
ASP 2800.0273
ALA 3210.0254
VAL 3220.0092
ALA 3230.0145
TYR 3240.0112
HIS 3250.0117
LEU 3260.0099
ILE 3270.0132
ILE 3280.0140
ASP 3290.0090
ASN 3300.0076
ARG 3310.0073
ARG 3320.0173
ILE 3330.0242
MET 3340.0159
ASN 3350.0206
GLU 3360.0350
ALA 3370.0336
LYS 3380.0193
ASP 3390.0228
PHE 3400.0269
TYR 3410.0171
LEU 3420.0069
ALA 3430.0111
THR 3440.0100
SER 3450.0097
PRO 3460.0154
PRO 3470.0275
ASP 3480.0436
SER 3490.0241
PHE 3500.0328
LEU 3510.0385
ASP 3520.0209
ASP 3530.0231
HIS 3540.0347
HIS 3550.0299
LEU 3560.0334
THR 3570.0178
ARG 3580.0219
PRO 3590.0152
HIS 3600.0173
PRO 3610.0174
GLU 3620.0126
ARG 3630.0082
VAL 3640.0106
PRO 3650.0096
PHE 3660.0053
LEU 3670.0058
VAL 3680.0138
ALA 3690.0161
GLU 3700.0099
THR 3710.0052
PRO 3720.0130
ARG 3730.0053
ALA 3740.0070
ALA 3940.0183
LYS 3950.0167
TRP 3960.0133
HIS 3970.0119
LEU 3980.0099
GLY 3990.0085
ILE 4000.0110
ARG 4010.0118
SER 4020.0155
GLN 4030.0232
SER 4040.0226
ARG 4050.0219
PRO 4060.0165
ASN 4070.0147
ASP 4080.0144
ILE 4090.0102
MET 4100.0061
ALA 4110.0048
GLU 4120.0065
VAL 4130.0054
CYS 4140.0073
ARG 4150.0100
ALA 4160.0097
ILE 4170.0097
LYS 4180.0125
GLN 4190.0132
LEU 4200.0123
ASP 4210.0139
TYR 4220.0119
GLU 4230.0132
TRP 4240.0105
LYS 4250.0107
VAL 4260.0083
VAL 4270.0098
ASN 4280.0090
PRO 4290.0079
TYR 4300.0071
TYR 4310.0050
LEU 4320.0050
ARG 4330.0079
VAL 4340.0085
ARG 4350.0102
ARG 4360.0109
LYS 4370.0060
ASN 4380.0029
PRO 4390.0127
VAL 4400.0179
THR 4410.0172
SER 4420.0071
THR 4430.0092
PHE 4440.0100
SER 4450.0065
LYS 4460.0067
MET 4470.0062
SER 4480.0054
LEU 4490.0041
GLN 4500.0034
LEU 4510.0051
TYR 4520.0071
GLN 4530.0121
VAL 4540.0126
ASP 4550.0199
SER 4560.0249
ARG 4570.0257
THR 4580.0203
TYR 4590.0137
LEU 4600.0075
LEU 4610.0056
ASP 4620.0048
PHE 4630.0050
ARG 4640.0050
SER 4650.0052
ILE 4660.0072
ASP 4670.0068
ASP 4680.0072
GLU 4690.0075
ILE 4700.0100
LYS 2030.0276
SER 2040.0212
PRO 2050.0120
PRO 2060.0074
ILE 2070.0062
LEU 2080.0039
PRO 2090.0035
PRO 2100.0056
HIS 2110.0067
LEU 2120.0083
LEU 2130.0096
GLN 2140.0118
VAL 2150.0121
ILE 2160.0112
LEU 2170.0109
ASN 2180.0144
LYS 2190.0110
ASP 2200.0086
THR 2210.0128
ASN 2220.0125
ILE 2230.0129
SER 2240.0163
CYS 2250.0175
ASP 2260.0180
PRO 2270.0157
ALA 2280.0182
LEU 2290.0162
LEU 2300.0118
PRO 2310.0133
GLU 2320.0131
PRO 2330.0130
ASN 2340.0117
HIS 2350.0103
VAL 2360.0085
MET 2370.0084
LEU 2380.0080
ASN 2390.0060
HIS 2400.0063
LEU 2410.0062
TYR 2420.0085
ALA 2430.0099
LEU 2440.0133
SER 2450.0232
ILE 2460.0245
LYS 2470.0310
ASP 2480.0371
SER 2490.0305
VAL 2500.0240
MET 2510.0150
VAL 2520.0127
LEU 2530.0079
SER 2540.0073
ALA 2550.0059
THR 2560.0070
HIS 2570.0068
ARG 2580.0116
TYR 2590.0154
LYS 2600.0222
LYS 2610.0239
LYS 2620.0207
TYR 2630.0124
VAL 2640.0100
THR 2650.0095
THR 2660.0039
LEU 2670.0074
LEU 2680.0089
TYR 2690.0143
LYS 2700.0156
PRO 2710.0219
PRO 5280.0560
GLY 5290.0328
SER 5300.0134
HIS 5310.0058
THR 5320.0039
ILE 5330.0042
GLU 5340.0037
PHE 5350.0033
PHE 5360.0041
GLU 5370.0040
MET 5380.0045
CYS 5390.0045
ALA 5400.0035
ASN 5410.0058
LEU 5420.0059
ILE 5430.0051
LYS 5440.0072
ILE 5450.0093
LEU 5460.0074
ALA 5470.0074
GLN 5480.0132

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.