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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0920
ARG 100.0341
VAL 110.0260
LYS 120.0153
ILE 130.0175
GLY 140.0221
HIS 150.0202
TYR 160.0142
ILE 170.0151
LEU 180.0170
GLY 190.0234
ASP 200.0234
THR 210.0160
LEU 220.0177
GLY 230.0150
VAL 240.0143
GLY 250.0126
THR 260.0125
PHE 270.0150
GLY 280.0096
LYS 290.0116
VAL 300.0114
LYS 310.0121
VAL 320.0133
GLY 330.0116
LYS 340.0206
HIS 350.0283
GLU 360.0318
LEU 370.0509
THR 380.0546
GLY 390.0415
HIS 400.0281
LYS 410.0186
VAL 420.0128
ALA 430.0112
VAL 440.0092
LYS 450.0086
ILE 460.0107
LEU 470.0084
ASN 480.0112
ARG 490.0072
GLN 500.0094
LYS 510.0143
ILE 520.0146
ARG 530.0196
SER 540.0288
LEU 550.0355
ASP 560.0377
VAL 570.0265
VAL 580.0211
GLY 590.0202
LYS 600.0152
ILE 610.0094
ARG 620.0102
ARG 630.0074
GLU 640.0055
ILE 650.0043
GLN 660.0058
ASN 670.0036
LEU 680.0026
LYS 690.0031
LEU 700.0042
PHE 710.0030
ARG 720.0035
HIS 730.0055
PRO 740.0066
HIS 750.0049
ILE 760.0023
ILE 770.0027
LYS 780.0034
LEU 790.0085
TYR 800.0088
GLN 810.0083
VAL 820.0099
ILE 830.0110
SER 840.0157
THR 850.0262
PRO 860.0320
SER 870.0244
ASP 880.0154
ILE 890.0103
PHE 900.0094
MET 910.0079
VAL 920.0080
MET 930.0089
GLU 940.0071
TYR 950.0053
VAL 960.0038
SER 970.0065
GLY 980.0069
GLY 990.0061
GLU 1000.0055
LEU 1010.0057
PHE 1020.0055
ASP 1030.0098
TYR 1040.0097
ILE 1050.0093
CYS 1060.0161
LYS 1070.0179
ASN 1080.0168
GLY 1090.0128
ARG 1100.0095
LEU 1110.0068
ASP 1120.0060
GLU 1130.0037
LYS 1140.0067
GLU 1150.0070
SER 1160.0047
ARG 1170.0052
ARG 1180.0074
LEU 1190.0063
PHE 1200.0048
GLN 1210.0071
GLN 1220.0072
ILE 1230.0048
LEU 1240.0054
SER 1250.0068
GLY 1260.0049
VAL 1270.0040
ASP 1280.0059
TYR 1290.0055
CYS 1300.0033
HIS 1310.0047
ARG 1320.0062
HIS 1330.0038
MET 1340.0036
VAL 1350.0035
VAL 1360.0018
HIS 1370.0017
ARG 1380.0021
ASP 1390.0030
LEU 1400.0025
LYS 1410.0019
PRO 1420.0006
GLU 1430.0016
ASN 1440.0009
VAL 1450.0026
LEU 1460.0041
LEU 1470.0064
ASP 1480.0069
ALA 1490.0113
HIS 1500.0129
MET 1510.0099
ASN 1520.0083
ALA 1530.0053
LYS 1540.0037
ILE 1550.0022
ALA 1560.0014
ASP 1570.0027
PHE 1580.0028
GLY 1590.0047
LEU 1600.0031
SER 1610.0027
ASN 1620.0029
MET 1630.0049
MET 1640.0034
SER 1650.0035
ASP 1660.0073
GLY 1670.0068
GLU 1680.0067
PHE 1690.0044
LEU 1700.0051
ARG 1710.0055
SER 1730.0030
CYS 1740.0030
GLY 1750.0037
SER 1760.0069
PRO 1770.0071
ASN 1780.0068
TYR 1790.0036
ALA 1800.0041
ALA 1810.0037
PRO 1820.0030
GLU 1830.0022
VAL 1840.0024
ILE 1850.0044
SER 1860.0030
GLY 1870.0024
ARG 1880.0041
LEU 1890.0043
TYR 1900.0043
ALA 1910.0050
GLY 1920.0036
PRO 1930.0026
GLU 1940.0030
VAL 1950.0030
ASP 1960.0030
ILE 1970.0042
TRP 1980.0041
SER 1990.0038
SER 2000.0037
GLY 2010.0040
VAL 2020.0036
ILE 2030.0029
LEU 2040.0030
TYR 2050.0041
ALA 2060.0050
LEU 2070.0044
LEU 2080.0047
CYS 2090.0080
GLY 2100.0089
THR 2110.0082
LEU 2120.0047
PRO 2130.0032
PHE 2140.0042
ASP 2150.0093
ASP 2160.0163
ASP 2170.0241
HIS 2180.0246
VAL 2190.0198
PRO 2200.0183
THR 2210.0167
LEU 2220.0124
PHE 2230.0094
LYS 2240.0108
LYS 2250.0090
ILE 2260.0055
CYS 2270.0062
ASP 2280.0063
GLY 2290.0055
ILE 2300.0069
PHE 2310.0063
TYR 2320.0091
THR 2330.0107
PRO 2340.0143
GLN 2350.0171
TYR 2360.0110
LEU 2370.0089
ASN 2380.0078
PRO 2390.0100
SER 2400.0086
VAL 2410.0066
ILE 2420.0082
SER 2430.0096
LEU 2440.0077
LEU 2450.0060
LYS 2460.0074
HIS 2470.0080
MET 2480.0055
LEU 2490.0054
GLN 2500.0060
VAL 2510.0042
ASP 2520.0045
PRO 2530.0044
MET 2540.0049
LYS 2550.0071
ARG 2560.0070
ALA 2570.0078
THR 2580.0088
ILE 2590.0084
LYS 2600.0121
ASP 2610.0112
ILE 2620.0091
ARG 2630.0114
GLU 2640.0131
HIS 2650.0109
GLU 2660.0118
TRP 2670.0084
PHE 2680.0088
LYS 2690.0121
GLN 2700.0103
ASP 2710.0121
LEU 2720.0131
PRO 2730.0156
LYS 2740.0182
TYR 2750.0163
LEU 2760.0137
PHE 2770.0144
PRO 2780.0164
GLU 2790.0186
ASP 2800.0192
ALA 3210.0321
VAL 3220.0224
ALA 3230.0116
TYR 3240.0227
HIS 3250.0208
LEU 3260.0171
ILE 3270.0235
ILE 3280.0217
ASP 3290.0110
ASN 3300.0148
ARG 3310.0111
ARG 3320.0068
ILE 3330.0132
MET 3340.0125
ASN 3350.0124
GLU 3360.0127
ALA 3370.0045
LYS 3380.0035
ASP 3390.0090
PHE 3400.0090
TYR 3410.0060
LEU 3420.0066
ALA 3430.0068
THR 3440.0077
SER 3450.0089
PRO 3460.0095
PRO 3470.0132
ASP 3480.0415
SER 3490.0223
PHE 3500.0228
LEU 3510.0271
ASP 3520.0222
ASP 3530.0343
HIS 3540.0282
HIS 3550.0219
LEU 3560.0408
THR 3570.0099
ARG 3580.0054
PRO 3590.0094
HIS 3600.0090
PRO 3610.0075
GLU 3620.0064
ARG 3630.0060
VAL 3640.0089
PRO 3650.0163
PHE 3660.0175
LEU 3670.0123
VAL 3680.0198
ALA 3690.0263
GLU 3700.0191
THR 3710.0110
PRO 3720.0231
ARG 3730.0149
ALA 3740.0089
ALA 3940.0265
LYS 3950.0247
TRP 3960.0201
HIS 3970.0169
LEU 3980.0123
GLY 3990.0069
ILE 4000.0098
ARG 4010.0115
SER 4020.0190
GLN 4030.0299
SER 4040.0313
ARG 4050.0314
PRO 4060.0208
ASN 4070.0174
ASP 4080.0198
ILE 4090.0152
MET 4100.0084
ALA 4110.0096
GLU 4120.0142
VAL 4130.0105
CYS 4140.0095
ARG 4150.0138
ALA 4160.0136
ILE 4170.0116
LYS 4180.0144
GLN 4190.0172
LEU 4200.0160
ASP 4210.0173
TYR 4220.0141
GLU 4230.0144
TRP 4240.0109
LYS 4250.0105
VAL 4260.0080
VAL 4270.0135
ASN 4280.0132
PRO 4290.0114
TYR 4300.0093
TYR 4310.0076
LEU 4320.0068
ARG 4330.0099
VAL 4340.0102
ARG 4350.0120
ARG 4360.0168
LYS 4370.0101
ASN 4380.0126
PRO 4390.0342
VAL 4400.0410
THR 4410.0344
SER 4420.0155
THR 4430.0101
PHE 4440.0059
SER 4450.0069
LYS 4460.0073
MET 4470.0077
SER 4480.0086
LEU 4490.0049
GLN 4500.0051
LEU 4510.0058
TYR 4520.0089
GLN 4530.0137
VAL 4540.0142
ASP 4550.0249
SER 4560.0356
ARG 4570.0342
THR 4580.0243
TYR 4590.0151
LEU 4600.0057
LEU 4610.0035
ASP 4620.0044
PHE 4630.0059
ARG 4640.0072
SER 4650.0086
ILE 4660.0073
ASP 4670.0054
ASP 4680.0042
GLU 4690.0047
ILE 4700.0047
LYS 2030.0373
SER 2040.0290
PRO 2050.0178
PRO 2060.0138
ILE 2070.0106
LEU 2080.0072
PRO 2090.0058
PRO 2100.0054
HIS 2110.0069
LEU 2120.0081
LEU 2130.0074
GLN 2140.0099
VAL 2150.0159
ILE 2160.0143
LEU 2170.0139
ASN 2180.0166
LYS 2190.0137
ASP 2200.0095
THR 2210.0081
ASN 2220.0081
ILE 2230.0084
SER 2240.0089
CYS 2250.0089
ASP 2260.0087
PRO 2270.0065
ALA 2280.0062
LEU 2290.0066
LEU 2300.0085
PRO 2310.0090
GLU 2320.0086
PRO 2330.0100
ASN 2340.0087
HIS 2350.0078
VAL 2360.0084
MET 2370.0083
LEU 2380.0087
ASN 2390.0087
HIS 2400.0089
LEU 2410.0086
TYR 2420.0127
ALA 2430.0150
LEU 2440.0192
SER 2450.0309
ILE 2460.0286
LYS 2470.0384
ASP 2480.0476
SER 2490.0397
VAL 2500.0314
MET 2510.0209
VAL 2520.0191
LEU 2530.0131
SER 2540.0117
ALA 2550.0104
THR 2560.0105
HIS 2570.0101
ARG 2580.0117
TYR 2590.0137
LYS 2600.0158
LYS 2610.0182
LYS 2620.0174
TYR 2630.0130
VAL 2640.0126
THR 2650.0119
THR 2660.0096
LEU 2670.0127
LEU 2680.0133
TYR 2690.0191
LYS 2700.0215
PRO 2710.0300
PRO 5280.0920
GLY 5290.0540
SER 5300.0161
HIS 5310.0012
THR 5320.0045
ILE 5330.0077
GLU 5340.0055
PHE 5350.0058
PHE 5360.0089
GLU 5370.0073
MET 5380.0068
CYS 5390.0079
ALA 5400.0061
ASN 5410.0078
LEU 5420.0075
ILE 5430.0068
LYS 5440.0109
ILE 5450.0139
LEU 5460.0122
ALA 5470.0131
GLN 5480.0227

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.