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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1017
ARG 100.0140
VAL 110.0135
LYS 120.0139
ILE 130.0124
GLY 140.0147
HIS 150.0151
TYR 160.0137
ILE 170.0134
LEU 180.0125
GLY 190.0121
ASP 200.0123
THR 210.0124
LEU 220.0112
GLY 230.0139
VAL 240.0161
GLY 250.0166
THR 260.0197
PHE 270.0194
GLY 280.0179
LYS 290.0156
VAL 300.0133
LYS 310.0114
VAL 320.0106
GLY 330.0101
LYS 340.0138
HIS 350.0152
GLU 360.0161
LEU 370.0180
THR 380.0175
GLY 390.0160
HIS 400.0139
LYS 410.0112
VAL 420.0102
ALA 430.0096
VAL 440.0088
LYS 450.0104
ILE 460.0114
LEU 470.0163
ASN 480.0201
ARG 490.0271
GLN 500.0346
LYS 510.0344
ILE 520.0312
ARG 530.0349
SER 540.0481
LEU 550.0453
ASP 560.0354
VAL 570.0330
VAL 580.0188
GLY 590.0242
LYS 600.0281
ILE 610.0189
ARG 620.0195
ARG 630.0207
GLU 640.0171
ILE 650.0162
GLN 660.0181
ASN 670.0151
LEU 680.0129
LYS 690.0140
LEU 700.0140
PHE 710.0100
ARG 720.0075
HIS 730.0039
PRO 740.0043
HIS 750.0064
ILE 760.0047
ILE 770.0060
LYS 780.0074
LEU 790.0118
TYR 800.0101
GLN 810.0098
VAL 820.0089
ILE 830.0018
SER 840.0055
THR 850.0161
PRO 860.0246
SER 870.0252
ASP 880.0154
ILE 890.0095
PHE 900.0058
MET 910.0094
VAL 920.0082
MET 930.0099
GLU 940.0085
TYR 950.0067
VAL 960.0037
SER 970.0049
GLY 980.0100
GLY 990.0105
GLU 1000.0118
LEU 1010.0128
PHE 1020.0148
ASP 1030.0158
TYR 1040.0154
ILE 1050.0166
CYS 1060.0211
LYS 1070.0221
ASN 1080.0210
GLY 1090.0135
ARG 1100.0113
LEU 1110.0114
ASP 1120.0111
GLU 1130.0114
LYS 1140.0116
GLU 1150.0113
SER 1160.0114
ARG 1170.0117
ARG 1180.0113
LEU 1190.0113
PHE 1200.0116
GLN 1210.0104
GLN 1220.0103
ILE 1230.0104
LEU 1240.0107
SER 1250.0084
GLY 1260.0085
VAL 1270.0090
ASP 1280.0066
TYR 1290.0047
CYS 1300.0061
HIS 1310.0053
ARG 1320.0036
HIS 1330.0053
MET 1340.0054
VAL 1350.0069
VAL 1360.0055
HIS 1370.0067
ARG 1380.0087
ASP 1390.0102
LEU 1400.0101
LYS 1410.0114
PRO 1420.0120
GLU 1430.0128
ASN 1440.0100
VAL 1450.0099
LEU 1460.0087
LEU 1470.0084
ASP 1480.0066
ALA 1490.0107
HIS 1500.0116
MET 1510.0112
ASN 1520.0090
ALA 1530.0086
LYS 1540.0055
ILE 1550.0068
ALA 1560.0089
ASP 1570.0097
PHE 1580.0113
GLY 1590.0131
LEU 1600.0113
SER 1610.0095
ASN 1620.0102
MET 1630.0100
MET 1640.0058
SER 1650.0062
ASP 1660.0041
GLY 1670.0025
GLU 1680.0027
PHE 1690.0052
LEU 1700.0066
ARG 1710.0079
SER 1730.0106
CYS 1740.0092
GLY 1750.0096
SER 1760.0176
PRO 1770.0180
ASN 1780.0126
TYR 1790.0126
ALA 1800.0154
ALA 1810.0163
PRO 1820.0178
GLU 1830.0192
VAL 1840.0178
ILE 1850.0240
SER 1860.0222
GLY 1870.0198
ARG 1880.0127
LEU 1890.0099
TYR 1900.0095
ALA 1910.0071
GLY 1920.0083
PRO 1930.0088
GLU 1940.0126
VAL 1950.0126
ASP 1960.0109
ILE 1970.0138
TRP 1980.0134
SER 1990.0130
SER 2000.0122
GLY 2010.0121
VAL 2020.0104
ILE 2030.0099
LEU 2040.0103
TYR 2050.0078
ALA 2060.0088
LEU 2070.0094
LEU 2080.0092
CYS 2090.0054
GLY 2100.0044
THR 2110.0042
LEU 2120.0051
PRO 2130.0064
PHE 2140.0028
ASP 2150.0255
ASP 2160.0625
ASP 2170.1017
HIS 2180.0981
VAL 2190.0835
PRO 2200.0776
THR 2210.0547
LEU 2220.0383
PHE 2230.0349
LYS 2240.0274
LYS 2250.0162
ILE 2260.0087
CYS 2270.0164
ASP 2280.0084
GLY 2290.0111
ILE 2300.0083
PHE 2310.0074
TYR 2320.0078
THR 2330.0090
PRO 2340.0087
GLN 2350.0095
TYR 2360.0099
LEU 2370.0104
ASN 2380.0122
PRO 2390.0143
SER 2400.0149
VAL 2410.0134
ILE 2420.0127
SER 2430.0149
LEU 2440.0146
LEU 2450.0123
LYS 2460.0124
HIS 2470.0148
MET 2480.0141
LEU 2490.0128
GLN 2500.0143
VAL 2510.0155
ASP 2520.0160
PRO 2530.0156
MET 2540.0145
LYS 2550.0144
ARG 2560.0149
ALA 2570.0160
THR 2580.0159
ILE 2590.0136
LYS 2600.0173
ASP 2610.0170
ILE 2620.0152
ARG 2630.0143
GLU 2640.0158
HIS 2650.0157
GLU 2660.0155
TRP 2670.0140
PHE 2680.0136
LYS 2690.0139
GLN 2700.0126
ASP 2710.0111
LEU 2720.0106
PRO 2730.0119
LYS 2740.0139
TYR 2750.0135
LEU 2760.0120
PHE 2770.0134
PRO 2780.0196
GLU 2790.0197
ASP 2800.0196
ALA 3210.0130
VAL 3220.0079
ALA 3230.0074
TYR 3240.0076
HIS 3250.0096
LEU 3260.0061
ILE 3270.0075
ILE 3280.0092
ASP 3290.0076
ASN 3300.0080
ARG 3310.0082
ARG 3320.0160
ILE 3330.0219
MET 3340.0115
ASN 3350.0206
GLU 3360.0334
ALA 3370.0296
LYS 3380.0179
ASP 3390.0183
PHE 3400.0190
TYR 3410.0092
LEU 3420.0023
ALA 3430.0041
THR 3440.0054
SER 3450.0092
PRO 3460.0071
PRO 3470.0073
ASP 3480.0202
SER 3490.0167
PHE 3500.0091
LEU 3510.0164
ASP 3520.0166
ASP 3530.0158
HIS 3540.0152
HIS 3550.0119
LEU 3560.0111
THR 3570.0107
ARG 3580.0101
PRO 3590.0076
HIS 3600.0078
PRO 3610.0083
GLU 3620.0079
ARG 3630.0057
VAL 3640.0032
PRO 3650.0064
PHE 3660.0079
LEU 3670.0049
VAL 3680.0069
ALA 3690.0114
GLU 3700.0092
THR 3710.0048
PRO 3720.0103
ARG 3730.0070
ALA 3740.0038
ALA 3940.0090
LYS 3950.0083
TRP 3960.0063
HIS 3970.0050
LEU 3980.0034
GLY 3990.0010
ILE 4000.0031
ARG 4010.0051
SER 4020.0073
GLN 4030.0109
SER 4040.0105
ARG 4050.0087
PRO 4060.0063
ASN 4070.0064
ASP 4080.0085
ILE 4090.0063
MET 4100.0057
ALA 4110.0065
GLU 4120.0051
VAL 4130.0047
CYS 4140.0047
ARG 4150.0045
ALA 4160.0038
ILE 4170.0038
LYS 4180.0043
GLN 4190.0035
LEU 4200.0031
ASP 4210.0035
TYR 4220.0038
GLU 4230.0044
TRP 4240.0043
LYS 4250.0043
VAL 4260.0041
VAL 4270.0039
ASN 4280.0031
PRO 4290.0028
TYR 4300.0028
TYR 4310.0031
LEU 4320.0034
ARG 4330.0040
VAL 4340.0039
ARG 4350.0043
ARG 4360.0041
LYS 4370.0032
ASN 4380.0032
PRO 4390.0055
VAL 4400.0076
THR 4410.0078
SER 4420.0051
THR 4430.0051
PHE 4440.0051
SER 4450.0041
LYS 4460.0041
MET 4470.0039
SER 4480.0034
LEU 4490.0031
GLN 4500.0025
LEU 4510.0021
TYR 4520.0027
GLN 4530.0045
VAL 4540.0072
ASP 4550.0109
SER 4560.0124
ARG 4570.0120
THR 4580.0098
TYR 4590.0062
LEU 4600.0036
LEU 4610.0031
ASP 4620.0026
PHE 4630.0028
ARG 4640.0031
SER 4650.0036
ILE 4660.0046
ASP 4670.0043
ASP 4680.0037
GLU 4690.0019
ILE 4700.0052
LYS 2030.0043
SER 2040.0016
PRO 2050.0017
PRO 2060.0038
ILE 2070.0051
LEU 2080.0048
PRO 2090.0065
PRO 2100.0066
HIS 2110.0053
LEU 2120.0015
LEU 2130.0030
GLN 2140.0032
VAL 2150.0047
ILE 2160.0046
LEU 2170.0041
ASN 2180.0057
LYS 2190.0061
ASP 2200.0064
THR 2210.0075
ASN 2220.0065
ILE 2230.0062
SER 2240.0061
CYS 2250.0057
ASP 2260.0057
PRO 2270.0059
ALA 2280.0053
LEU 2290.0036
LEU 2300.0039
PRO 2310.0056
GLU 2320.0059
PRO 2330.0061
ASN 2340.0042
HIS 2350.0034
VAL 2360.0013
MET 2370.0021
LEU 2380.0035
ASN 2390.0037
HIS 2400.0028
LEU 2410.0024
TYR 2420.0030
ALA 2430.0043
LEU 2440.0061
SER 2450.0118
ILE 2460.0119
LYS 2470.0189
ASP 2480.0283
SER 2490.0237
VAL 2500.0145
MET 2510.0084
VAL 2520.0064
LEU 2530.0037
SER 2540.0027
ALA 2550.0028
THR 2560.0039
HIS 2570.0059
ARG 2580.0093
TYR 2590.0133
LYS 2600.0182
LYS 2610.0185
LYS 2620.0151
TYR 2630.0084
VAL 2640.0069
THR 2650.0046
THR 2660.0036
LEU 2670.0033
LEU 2680.0039
TYR 2690.0062
LYS 2700.0092
PRO 2710.0143
PRO 5280.0217
GLY 5290.0118
SER 5300.0052
HIS 5310.0045
THR 5320.0042
ILE 5330.0037
GLU 5340.0036
PHE 5350.0036
PHE 5360.0032
GLU 5370.0031
MET 5380.0030
CYS 5390.0033
ALA 5400.0030
ASN 5410.0023
LEU 5420.0030
ILE 5430.0028
LYS 5440.0026
ILE 5450.0028
LEU 5460.0033
ALA 5470.0030
GLN 5480.0028

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.