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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1338
ARG 100.0069
VAL 110.0043
LYS 120.0022
ILE 130.0016
GLY 140.0051
HIS 150.0057
TYR 160.0020
ILE 170.0025
LEU 180.0028
GLY 190.0040
ASP 200.0055
THR 210.0055
LEU 220.0057
GLY 230.0044
VAL 240.0041
GLY 250.0023
THR 260.0010
PHE 270.0024
GLY 280.0028
LYS 290.0034
VAL 300.0039
LYS 310.0037
VAL 320.0033
GLY 330.0018
LYS 340.0015
HIS 350.0040
GLU 360.0068
LEU 370.0103
THR 380.0074
GLY 390.0036
HIS 400.0022
LYS 410.0023
VAL 420.0033
ALA 430.0034
VAL 440.0033
LYS 450.0030
ILE 460.0036
LEU 470.0035
ASN 480.0048
ARG 490.0041
GLN 500.0050
LYS 510.0046
ILE 520.0026
ARG 530.0025
SER 540.0055
LEU 550.0080
ASP 560.0096
VAL 570.0069
VAL 580.0061
GLY 590.0074
LYS 600.0053
ILE 610.0026
ARG 620.0042
ARG 630.0041
GLU 640.0020
ILE 650.0025
GLN 660.0038
ASN 670.0027
LEU 680.0020
LYS 690.0033
LEU 700.0037
PHE 710.0026
ARG 720.0030
HIS 730.0020
PRO 740.0024
HIS 750.0018
ILE 760.0013
ILE 770.0015
LYS 780.0018
LEU 790.0027
TYR 800.0031
GLN 810.0037
VAL 820.0042
ILE 830.0049
SER 840.0058
THR 850.0082
PRO 860.0093
SER 870.0078
ASP 880.0057
ILE 890.0047
PHE 900.0041
MET 910.0032
VAL 920.0032
MET 930.0030
GLU 940.0031
TYR 950.0031
VAL 960.0028
SER 970.0016
GLY 980.0015
GLY 990.0014
GLU 1000.0013
LEU 1010.0015
PHE 1020.0018
ASP 1030.0017
TYR 1040.0015
ILE 1050.0022
CYS 1060.0029
LYS 1070.0027
ASN 1080.0028
GLY 1090.0031
ARG 1100.0029
LEU 1110.0023
ASP 1120.0022
GLU 1130.0031
LYS 1140.0025
GLU 1150.0016
SER 1160.0019
ARG 1170.0027
ARG 1180.0021
LEU 1190.0015
PHE 1200.0018
GLN 1210.0027
GLN 1220.0019
ILE 1230.0012
LEU 1240.0016
SER 1250.0016
GLY 1260.0007
VAL 1270.0008
ASP 1280.0007
TYR 1290.0006
CYS 1300.0018
HIS 1310.0020
ARG 1320.0015
HIS 1330.0035
MET 1340.0052
VAL 1350.0037
VAL 1360.0025
HIS 1370.0019
ARG 1380.0021
ASP 1390.0016
LEU 1400.0017
LYS 1410.0019
PRO 1420.0018
GLU 1430.0017
ASN 1440.0013
VAL 1450.0011
LEU 1460.0011
LEU 1470.0012
ASP 1480.0016
ALA 1490.0019
HIS 1500.0019
MET 1510.0014
ASN 1520.0014
ALA 1530.0014
LYS 1540.0011
ILE 1550.0007
ALA 1560.0006
ASP 1570.0006
PHE 1580.0011
GLY 1590.0016
LEU 1600.0023
SER 1610.0024
ASN 1620.0032
MET 1630.0043
MET 1640.0059
SER 1650.0073
ASP 1660.0122
GLY 1670.0098
GLU 1680.0074
PHE 1690.0054
LEU 1700.0040
ARG 1710.0037
SER 1730.0018
CYS 1740.0014
GLY 1750.0018
SER 1760.0058
PRO 1770.0071
ASN 1780.0050
TYR 1790.0032
ALA 1800.0043
ALA 1810.0043
PRO 1820.0048
GLU 1830.0045
VAL 1840.0043
ILE 1850.0067
SER 1860.0047
GLY 1870.0039
ARG 1880.0028
LEU 1890.0024
TYR 1900.0034
ALA 1910.0068
GLY 1920.0046
PRO 1930.0027
GLU 1940.0025
VAL 1950.0027
ASP 1960.0023
ILE 1970.0028
TRP 1980.0030
SER 1990.0027
SER 2000.0019
GLY 2010.0021
VAL 2020.0022
ILE 2030.0020
LEU 2040.0016
TYR 2050.0020
ALA 2060.0027
LEU 2070.0019
LEU 2080.0025
CYS 2090.0029
GLY 2100.0031
THR 2110.0034
LEU 2120.0043
PRO 2130.0042
PHE 2140.0043
ASP 2150.0138
ASP 2160.0283
ASP 2170.0440
HIS 2180.0429
VAL 2190.0364
PRO 2200.0340
THR 2210.0251
LEU 2220.0180
PHE 2230.0156
LYS 2240.0134
LYS 2250.0097
ILE 2260.0038
CYS 2270.0061
ASP 2280.0025
GLY 2290.0019
ILE 2300.0014
PHE 2310.0023
TYR 2320.0034
THR 2330.0051
PRO 2340.0064
GLN 2350.0076
TYR 2360.0051
LEU 2370.0052
ASN 2380.0055
PRO 2390.0070
SER 2400.0065
VAL 2410.0053
ILE 2420.0053
SER 2430.0058
LEU 2440.0049
LEU 2450.0036
LYS 2460.0041
HIS 2470.0043
MET 2480.0032
LEU 2490.0036
GLN 2500.0043
VAL 2510.0048
ASP 2520.0052
PRO 2530.0046
MET 2540.0048
LYS 2550.0046
ARG 2560.0042
ALA 2570.0043
THR 2580.0036
ILE 2590.0029
LYS 2600.0043
ASP 2610.0049
ILE 2620.0041
ARG 2630.0050
GLU 2640.0065
HIS 2650.0063
GLU 2660.0076
TRP 2670.0060
PHE 2680.0052
LYS 2690.0066
GLN 2700.0066
ASP 2710.0064
LEU 2720.0060
PRO 2730.0064
LYS 2740.0081
TYR 2750.0067
LEU 2760.0049
PHE 2770.0050
PRO 2780.0060
GLU 2790.0089
ASP 2800.0108
ALA 3210.0120
VAL 3220.0107
ALA 3230.0099
TYR 3240.0109
HIS 3250.0085
LEU 3260.0102
ILE 3270.0106
ILE 3280.0082
ASP 3290.0085
ASN 3300.0070
ARG 3310.0048
ARG 3320.0077
ILE 3330.0112
MET 3340.0108
ASN 3350.0094
GLU 3360.0097
ALA 3370.0125
LYS 3380.0113
ASP 3390.0131
PHE 3400.0144
TYR 3410.0131
LEU 3420.0054
ALA 3430.0049
THR 3440.0068
SER 3450.0086
PRO 3460.0099
PRO 3470.0076
ASP 3480.0348
SER 3490.0286
PHE 3500.0198
LEU 3510.0276
ASP 3520.0273
ASP 3530.0302
HIS 3540.0208
HIS 3550.0120
LEU 3560.0259
THR 3570.0163
ARG 3580.0158
PRO 3590.0137
HIS 3600.0126
PRO 3610.0138
GLU 3620.0112
ARG 3630.0052
VAL 3640.0050
PRO 3650.0105
PHE 3660.0140
LEU 3670.0103
VAL 3680.0162
ALA 3690.0243
GLU 3700.0182
THR 3710.0088
PRO 3720.0212
ARG 3730.0135
ALA 3740.0114
ALA 3940.0162
LYS 3950.0124
TRP 3960.0061
HIS 3970.0042
LEU 3980.0018
GLY 3990.0036
ILE 4000.0064
ARG 4010.0063
SER 4020.0062
GLN 4030.0078
SER 4040.0066
ARG 4050.0045
PRO 4060.0034
ASN 4070.0049
ASP 4080.0058
ILE 4090.0049
MET 4100.0055
ALA 4110.0082
GLU 4120.0083
VAL 4130.0070
CYS 4140.0095
ARG 4150.0128
ALA 4160.0120
ILE 4170.0111
LYS 4180.0166
GLN 4190.0183
LEU 4200.0158
ASP 4210.0178
TYR 4220.0129
GLU 4230.0138
TRP 4240.0125
LYS 4250.0141
VAL 4260.0136
VAL 4270.0145
ASN 4280.0129
PRO 4290.0106
TYR 4300.0057
TYR 4310.0066
LEU 4320.0065
ARG 4330.0077
VAL 4340.0065
ARG 4350.0082
ARG 4360.0082
LYS 4370.0205
ASN 4380.0233
PRO 4390.0487
VAL 4400.0523
THR 4410.0418
SER 4420.0374
THR 4430.0220
PHE 4440.0127
SER 4450.0015
LYS 4460.0027
MET 4470.0047
SER 4480.0035
LEU 4490.0021
GLN 4500.0041
LEU 4510.0030
TYR 4520.0050
GLN 4530.0069
VAL 4540.0075
ASP 4550.0103
SER 4560.0111
ARG 4570.0092
THR 4580.0081
TYR 4590.0056
LEU 4600.0043
LEU 4610.0039
ASP 4620.0046
PHE 4630.0067
ARG 4640.0079
SER 4650.0089
ILE 4660.0086
ASP 4670.0102
ASP 4680.0089
GLU 4690.0091
ILE 4700.0190
LYS 2030.0122
SER 2040.0094
PRO 2050.0056
PRO 2060.0052
ILE 2070.0063
LEU 2080.0058
PRO 2090.0068
PRO 2100.0088
HIS 2110.0091
LEU 2120.0078
LEU 2130.0088
GLN 2140.0104
VAL 2150.0073
ILE 2160.0074
LEU 2170.0018
ASN 2180.0064
LYS 2190.0066
ASP 2200.0049
THR 2210.0049
ASN 2220.0072
ILE 2230.0086
SER 2240.0103
CYS 2250.0077
ASP 2260.0072
PRO 2270.0061
ALA 2280.0059
LEU 2290.0036
LEU 2300.0063
PRO 2310.0119
GLU 2320.0195
PRO 2330.0208
ASN 2340.0185
HIS 2350.0161
VAL 2360.0128
MET 2370.0105
LEU 2380.0121
ASN 2390.0106
HIS 2400.0082
LEU 2410.0075
TYR 2420.0035
ALA 2430.0066
LEU 2440.0101
SER 2450.0210
ILE 2460.0422
LYS 2470.0751
ASP 2480.1338
SER 2490.1132
VAL 2500.0524
MET 2510.0234
VAL 2520.0138
LEU 2530.0119
SER 2540.0103
ALA 2550.0114
THR 2560.0139
HIS 2570.0221
ARG 2580.0308
TYR 2590.0411
LYS 2600.0567
LYS 2610.0501
LYS 2620.0372
TYR 2630.0259
VAL 2640.0214
THR 2650.0142
THR 2660.0149
LEU 2670.0124
LEU 2680.0158
TYR 2690.0153
LYS 2700.0282
PRO 2710.0421
PRO 5280.0327
GLY 5290.0168
SER 5300.0147
HIS 5310.0150
THR 5320.0178
ILE 5330.0189
GLU 5340.0137
PHE 5350.0131
PHE 5360.0150
GLU 5370.0152
MET 5380.0106
CYS 5390.0102
ALA 5400.0125
ASN 5410.0104
LEU 5420.0086
ILE 5430.0102
LYS 5440.0140
ILE 5450.0128
LEU 5460.0092
ALA 5470.0134
GLN 5480.0168

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.