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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0851
ARG 100.0214
VAL 110.0123
LYS 120.0047
ILE 130.0080
GLY 140.0184
HIS 150.0211
TYR 160.0092
ILE 170.0078
LEU 180.0071
GLY 190.0044
ASP 200.0090
THR 210.0106
LEU 220.0127
GLY 230.0108
VAL 240.0105
GLY 250.0083
THR 260.0050
PHE 270.0108
GLY 280.0091
LYS 290.0102
VAL 300.0110
LYS 310.0078
VAL 320.0067
GLY 330.0045
LYS 340.0068
HIS 350.0182
GLU 360.0271
LEU 370.0424
THR 380.0347
GLY 390.0199
HIS 400.0107
LYS 410.0057
VAL 420.0099
ALA 430.0100
VAL 440.0103
LYS 450.0093
ILE 460.0122
LEU 470.0113
ASN 480.0163
ARG 490.0107
GLN 500.0185
LYS 510.0215
ILE 520.0151
ARG 530.0180
SER 540.0319
LEU 550.0374
ASP 560.0399
VAL 570.0278
VAL 580.0231
GLY 590.0253
LYS 600.0170
ILE 610.0088
ARG 620.0131
ARG 630.0120
GLU 640.0062
ILE 650.0073
GLN 660.0111
ASN 670.0084
LEU 680.0074
LYS 690.0098
LEU 700.0105
PHE 710.0088
ARG 720.0092
HIS 730.0063
PRO 740.0061
HIS 750.0062
ILE 760.0054
ILE 770.0048
LYS 780.0057
LEU 790.0074
TYR 800.0088
GLN 810.0113
VAL 820.0132
ILE 830.0163
SER 840.0195
THR 850.0283
PRO 860.0305
SER 870.0259
ASP 880.0189
ILE 890.0146
PHE 900.0134
MET 910.0098
VAL 920.0099
MET 930.0087
GLU 940.0087
TYR 950.0084
VAL 960.0064
SER 970.0056
GLY 980.0053
GLY 990.0056
GLU 1000.0045
LEU 1010.0040
PHE 1020.0042
ASP 1030.0051
TYR 1040.0044
ILE 1050.0045
CYS 1060.0061
LYS 1070.0058
ASN 1080.0048
GLY 1090.0028
ARG 1100.0028
LEU 1110.0019
ASP 1120.0018
GLU 1130.0015
LYS 1140.0018
GLU 1150.0024
SER 1160.0025
ARG 1170.0024
ARG 1180.0032
LEU 1190.0040
PHE 1200.0035
GLN 1210.0036
GLN 1220.0044
ILE 1230.0048
LEU 1240.0043
SER 1250.0039
GLY 1260.0055
VAL 1270.0051
ASP 1280.0040
TYR 1290.0052
CYS 1300.0060
HIS 1310.0054
ARG 1320.0044
HIS 1330.0059
MET 1340.0059
VAL 1350.0061
VAL 1360.0055
HIS 1370.0051
ARG 1380.0049
ASP 1390.0043
LEU 1400.0045
LYS 1410.0038
PRO 1420.0037
GLU 1430.0044
ASN 1440.0045
VAL 1450.0043
LEU 1460.0046
LEU 1470.0044
ASP 1480.0050
ALA 1490.0052
HIS 1500.0048
MET 1510.0047
ASN 1520.0046
ALA 1530.0046
LYS 1540.0046
ILE 1550.0045
ALA 1560.0047
ASP 1570.0030
PHE 1580.0045
GLY 1590.0046
LEU 1600.0047
SER 1610.0052
ASN 1620.0063
MET 1630.0068
MET 1640.0054
SER 1650.0044
ASP 1660.0045
GLY 1670.0045
GLU 1680.0045
PHE 1690.0050
LEU 1700.0057
ARG 1710.0071
SER 1730.0065
CYS 1740.0062
GLY 1750.0048
SER 1760.0040
PRO 1770.0021
ASN 1780.0027
TYR 1790.0038
ALA 1800.0043
ALA 1810.0050
PRO 1820.0053
GLU 1830.0064
VAL 1840.0061
ILE 1850.0051
SER 1860.0065
GLY 1870.0078
ARG 1880.0077
LEU 1890.0067
TYR 1900.0059
ALA 1910.0055
GLY 1920.0056
PRO 1930.0053
GLU 1940.0055
VAL 1950.0058
ASP 1960.0053
ILE 1970.0053
TRP 1980.0048
SER 1990.0046
SER 2000.0047
GLY 2010.0043
VAL 2020.0039
ILE 2030.0040
LEU 2040.0036
TYR 2050.0034
ALA 2060.0034
LEU 2070.0030
LEU 2080.0027
CYS 2090.0036
GLY 2100.0036
THR 2110.0037
LEU 2120.0036
PRO 2130.0022
PHE 2140.0018
ASP 2150.0084
ASP 2160.0150
ASP 2170.0218
HIS 2180.0220
VAL 2190.0147
PRO 2200.0150
THR 2210.0156
LEU 2220.0097
PHE 2230.0068
LYS 2240.0107
LYS 2250.0089
ILE 2260.0053
CYS 2270.0071
ASP 2280.0082
GLY 2290.0057
ILE 2300.0040
PHE 2310.0030
TYR 2320.0035
THR 2330.0043
PRO 2340.0053
GLN 2350.0060
TYR 2360.0042
LEU 2370.0038
ASN 2380.0036
PRO 2390.0040
SER 2400.0032
VAL 2410.0032
ILE 2420.0039
SER 2430.0037
LEU 2440.0035
LEU 2450.0039
LYS 2460.0039
HIS 2470.0043
MET 2480.0047
LEU 2490.0046
GLN 2500.0050
VAL 2510.0052
ASP 2520.0059
PRO 2530.0061
MET 2540.0051
LYS 2550.0053
ARG 2560.0054
ALA 2570.0043
THR 2580.0042
ILE 2590.0036
LYS 2600.0021
ASP 2610.0026
ILE 2620.0022
ARG 2630.0004
GLU 2640.0013
HIS 2650.0016
GLU 2660.0019
TRP 2670.0014
PHE 2680.0009
LYS 2690.0012
GLN 2700.0007
ASP 2710.0023
LEU 2720.0054
PRO 2730.0102
LYS 2740.0121
TYR 2750.0101
LEU 2760.0070
PHE 2770.0056
PRO 2780.0099
GLU 2790.0170
ASP 2800.0177
ALA 3210.0738
VAL 3220.0525
ALA 3230.0422
TYR 3240.0417
HIS 3250.0370
LEU 3260.0283
ILE 3270.0302
ILE 3280.0339
ASP 3290.0239
ASN 3300.0213
ARG 3310.0204
ARG 3320.0330
ILE 3330.0551
MET 3340.0479
ASN 3350.0395
GLU 3360.0498
ALA 3370.0512
LYS 3380.0375
ASP 3390.0345
PHE 3400.0434
TYR 3410.0352
LEU 3420.0211
ALA 3430.0185
THR 3440.0100
SER 3450.0108
PRO 3460.0141
PRO 3470.0141
ASP 3480.0441
SER 3490.0245
PHE 3500.0240
LEU 3510.0350
ASP 3520.0227
ASP 3530.0258
HIS 3540.0415
HIS 3550.0293
LEU 3560.0534
THR 3570.0156
ARG 3580.0139
PRO 3590.0128
HIS 3600.0124
PRO 3610.0146
GLU 3620.0131
ARG 3630.0084
VAL 3640.0141
PRO 3650.0256
PHE 3660.0238
LEU 3670.0286
VAL 3680.0332
ALA 3690.0382
GLU 3700.0333
THR 3710.0304
PRO 3720.0476
ARG 3730.0288
ALA 3740.0851
ALA 3940.0098
LYS 3950.0094
TRP 3960.0058
HIS 3970.0033
LEU 3980.0011
GLY 3990.0042
ILE 4000.0035
ARG 4010.0049
SER 4020.0077
GLN 4030.0132
SER 4040.0141
ARG 4050.0130
PRO 4060.0098
ASN 4070.0122
ASP 4080.0145
ILE 4090.0093
MET 4100.0079
ALA 4110.0099
GLU 4120.0062
VAL 4130.0043
CYS 4140.0036
ARG 4150.0048
ALA 4160.0048
ILE 4170.0033
LYS 4180.0041
GLN 4190.0059
LEU 4200.0058
ASP 4210.0053
TYR 4220.0042
GLU 4230.0037
TRP 4240.0015
LYS 4250.0016
VAL 4260.0033
VAL 4270.0068
ASN 4280.0078
PRO 4290.0084
TYR 4300.0045
TYR 4310.0031
LEU 4320.0019
ARG 4330.0021
VAL 4340.0025
ARG 4350.0042
ARG 4360.0073
LYS 4370.0049
ASN 4380.0082
PRO 4390.0192
VAL 4400.0252
THR 4410.0237
SER 4420.0148
THR 4430.0106
PHE 4440.0075
SER 4450.0054
LYS 4460.0045
MET 4470.0047
SER 4480.0034
LEU 4490.0019
GLN 4500.0016
LEU 4510.0015
TYR 4520.0018
GLN 4530.0031
VAL 4540.0064
ASP 4550.0098
SER 4560.0101
ARG 4570.0118
THR 4580.0099
TYR 4590.0057
LEU 4600.0026
LEU 4610.0024
ASP 4620.0030
PHE 4630.0040
ARG 4640.0046
SER 4650.0055
ILE 4660.0054
ASP 4670.0058
ASP 4680.0040
GLU 4690.0038
ILE 4700.0025
LYS 2030.0120
SER 2040.0074
PRO 2050.0036
PRO 2060.0040
ILE 2070.0048
LEU 2080.0055
PRO 2090.0062
PRO 2100.0065
HIS 2110.0048
LEU 2120.0042
LEU 2130.0063
GLN 2140.0055
VAL 2150.0102
ILE 2160.0111
LEU 2170.0101
ASN 2180.0118
LYS 2190.0149
ASP 2200.0180
THR 2210.0203
ASN 2220.0170
ILE 2230.0165
SER 2240.0138
CYS 2250.0193
ASP 2260.0231
PRO 2270.0228
ALA 2280.0340
LEU 2290.0312
LEU 2300.0173
PRO 2310.0144
GLU 2320.0111
PRO 2330.0068
ASN 2340.0054
HIS 2350.0045
VAL 2360.0048
MET 2370.0052
LEU 2380.0048
ASN 2390.0054
HIS 2400.0046
LEU 2410.0044
TYR 2420.0024
ALA 2430.0035
LEU 2440.0049
SER 2450.0103
ILE 2460.0166
LYS 2470.0254
ASP 2480.0409
SER 2490.0350
VAL 2500.0172
MET 2510.0095
VAL 2520.0047
LEU 2530.0046
SER 2540.0048
ALA 2550.0054
THR 2560.0067
HIS 2570.0064
ARG 2580.0076
TYR 2590.0103
LYS 2600.0177
LYS 2610.0088
LYS 2620.0083
TYR 2630.0074
VAL 2640.0073
THR 2650.0072
THR 2660.0084
LEU 2670.0062
LEU 2680.0066
TYR 2690.0069
LYS 2700.0123
PRO 2710.0184
PRO 5280.0575
GLY 5290.0308
SER 5300.0069
HIS 5310.0073
THR 5320.0080
ILE 5330.0087
GLU 5340.0070
PHE 5350.0066
PHE 5360.0070
GLU 5370.0081
MET 5380.0067
CYS 5390.0055
ALA 5400.0066
ASN 5410.0064
LEU 5420.0048
ILE 5430.0045
LYS 5440.0070
ILE 5450.0064
LEU 5460.0047
ALA 5470.0048
GLN 5480.0062

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.