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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0871
ARG 100.0313
VAL 110.0238
LYS 120.0170
ILE 130.0080
GLY 140.0078
HIS 150.0094
TYR 160.0094
ILE 170.0166
LEU 180.0194
GLY 190.0272
ASP 200.0315
THR 210.0261
LEU 220.0262
GLY 230.0186
VAL 240.0140
GLY 250.0077
THR 260.0106
PHE 270.0071
GLY 280.0053
LYS 290.0078
VAL 300.0127
LYS 310.0179
VAL 320.0183
GLY 330.0136
LYS 340.0150
HIS 350.0084
GLU 360.0133
LEU 370.0095
THR 380.0067
GLY 390.0141
HIS 400.0123
LYS 410.0138
VAL 420.0120
ALA 430.0117
VAL 440.0097
LYS 450.0070
ILE 460.0077
LEU 470.0086
ASN 480.0139
ARG 490.0158
GLN 500.0181
LYS 510.0122
ILE 520.0031
ARG 530.0054
SER 540.0084
LEU 550.0191
ASP 560.0289
VAL 570.0230
VAL 580.0234
GLY 590.0276
LYS 600.0196
ILE 610.0118
ARG 620.0167
ARG 630.0149
GLU 640.0093
ILE 650.0103
GLN 660.0131
ASN 670.0102
LEU 680.0073
LYS 690.0101
LEU 700.0094
PHE 710.0068
ARG 720.0068
HIS 730.0033
PRO 740.0028
HIS 750.0025
ILE 760.0022
ILE 770.0012
LYS 780.0039
LEU 790.0067
TYR 800.0095
GLN 810.0099
VAL 820.0130
ILE 830.0156
SER 840.0197
THR 850.0300
PRO 860.0367
SER 870.0303
ASP 880.0190
ILE 890.0147
PHE 900.0111
MET 910.0073
VAL 920.0084
MET 930.0079
GLU 940.0079
TYR 950.0094
VAL 960.0128
SER 970.0172
GLY 980.0193
GLY 990.0175
GLU 1000.0142
LEU 1010.0133
PHE 1020.0166
ASP 1030.0218
TYR 1040.0189
ILE 1050.0197
CYS 1060.0293
LYS 1070.0307
ASN 1080.0265
GLY 1090.0156
ARG 1100.0107
LEU 1110.0088
ASP 1120.0084
GLU 1130.0056
LYS 1140.0075
GLU 1150.0076
SER 1160.0059
ARG 1170.0026
ARG 1180.0036
LEU 1190.0050
PHE 1200.0042
GLN 1210.0023
GLN 1220.0031
ILE 1230.0052
LEU 1240.0063
SER 1250.0063
GLY 1260.0062
VAL 1270.0068
ASP 1280.0066
TYR 1290.0060
CYS 1300.0063
HIS 1310.0065
ARG 1320.0065
HIS 1330.0055
MET 1340.0055
VAL 1350.0055
VAL 1360.0084
HIS 1370.0084
ARG 1380.0085
ASP 1390.0117
LEU 1400.0104
LYS 1410.0102
PRO 1420.0101
GLU 1430.0131
ASN 1440.0106
VAL 1450.0086
LEU 1460.0090
LEU 1470.0102
ASP 1480.0143
ALA 1490.0202
HIS 1500.0181
MET 1510.0126
ASN 1520.0078
ALA 1530.0058
LYS 1540.0025
ILE 1550.0050
ALA 1560.0065
ASP 1570.0066
PHE 1580.0071
GLY 1590.0082
LEU 1600.0085
SER 1610.0080
ASN 1620.0086
MET 1630.0067
MET 1640.0034
SER 1650.0042
ASP 1660.0054
GLY 1670.0051
GLU 1680.0061
PHE 1690.0062
LEU 1700.0056
ARG 1710.0050
SER 1730.0066
CYS 1740.0079
GLY 1750.0079
SER 1760.0096
PRO 1770.0058
ASN 1780.0082
TYR 1790.0081
ALA 1800.0076
ALA 1810.0074
PRO 1820.0042
GLU 1830.0053
VAL 1840.0050
ILE 1850.0037
SER 1860.0050
GLY 1870.0055
ARG 1880.0058
LEU 1890.0063
TYR 1900.0062
ALA 1910.0053
GLY 1920.0055
PRO 1930.0067
GLU 1940.0073
VAL 1950.0070
ASP 1960.0078
ILE 1970.0087
TRP 1980.0077
SER 1990.0083
SER 2000.0089
GLY 2010.0083
VAL 2020.0083
ILE 2030.0077
LEU 2040.0066
TYR 2050.0068
ALA 2060.0076
LEU 2070.0058
LEU 2080.0040
CYS 2090.0056
GLY 2100.0064
THR 2110.0082
LEU 2120.0114
PRO 2130.0087
PHE 2140.0079
ASP 2150.0198
ASP 2160.0274
ASP 2170.0372
HIS 2180.0403
VAL 2190.0305
PRO 2200.0327
THR 2210.0269
LEU 2220.0179
PHE 2230.0129
LYS 2240.0154
LYS 2250.0102
ILE 2260.0025
CYS 2270.0060
ASP 2280.0054
GLY 2290.0044
ILE 2300.0044
PHE 2310.0048
TYR 2320.0047
THR 2330.0037
PRO 2340.0018
GLN 2350.0021
TYR 2360.0028
LEU 2370.0013
ASN 2380.0027
PRO 2390.0042
SER 2400.0046
VAL 2410.0031
ILE 2420.0037
SER 2430.0054
LEU 2440.0056
LEU 2450.0058
LYS 2460.0058
HIS 2470.0069
MET 2480.0073
LEU 2490.0062
GLN 2500.0063
VAL 2510.0048
ASP 2520.0060
PRO 2530.0069
MET 2540.0079
LYS 2550.0074
ARG 2560.0072
ALA 2570.0077
THR 2580.0091
ILE 2590.0087
LYS 2600.0118
ASP 2610.0097
ILE 2620.0076
ARG 2630.0083
GLU 2640.0090
HIS 2650.0074
GLU 2660.0069
TRP 2670.0044
PHE 2680.0038
LYS 2690.0059
GLN 2700.0051
ASP 2710.0042
LEU 2720.0041
PRO 2730.0077
LYS 2740.0147
TYR 2750.0157
LEU 2760.0136
PHE 2770.0162
PRO 2780.0348
GLU 2790.0323
ASP 2800.0302
ALA 3210.0393
VAL 3220.0395
ALA 3230.0272
TYR 3240.0348
HIS 3250.0364
LEU 3260.0237
ILE 3270.0284
ILE 3280.0271
ASP 3290.0126
ASN 3300.0147
ARG 3310.0293
ARG 3320.0441
ILE 3330.0502
MET 3340.0245
ASN 3350.0621
GLU 3360.0871
ALA 3370.0723
LYS 3380.0455
ASP 3390.0497
PHE 3400.0498
TYR 3410.0282
LEU 3420.0147
ALA 3430.0163
THR 3440.0212
SER 3450.0250
PRO 3460.0164
PRO 3470.0153
ASP 3480.0203
SER 3490.0170
PHE 3500.0214
LEU 3510.0147
ASP 3520.0245
ASP 3530.0313
HIS 3540.0290
HIS 3550.0302
LEU 3560.0393
THR 3570.0176
ARG 3580.0114
PRO 3590.0081
HIS 3600.0125
PRO 3610.0114
GLU 3620.0131
ARG 3630.0160
VAL 3640.0150
PRO 3650.0175
PHE 3660.0182
LEU 3670.0196
VAL 3680.0196
ALA 3690.0141
GLU 3700.0055
THR 3710.0149
PRO 3720.0185
ARG 3730.0148
ALA 3740.0412
ALA 3940.0175
LYS 3950.0145
TRP 3960.0109
HIS 3970.0095
LEU 3980.0089
GLY 3990.0089
ILE 4000.0072
ARG 4010.0070
SER 4020.0088
GLN 4030.0171
SER 4040.0174
ARG 4050.0160
PRO 4060.0115
ASN 4070.0138
ASP 4080.0166
ILE 4090.0100
MET 4100.0077
ALA 4110.0100
GLU 4120.0060
VAL 4130.0043
CYS 4140.0026
ARG 4150.0042
ALA 4160.0051
ILE 4170.0038
LYS 4180.0038
GLN 4190.0057
LEU 4200.0059
ASP 4210.0057
TYR 4220.0048
GLU 4230.0041
TRP 4240.0029
LYS 4250.0040
VAL 4260.0049
VAL 4270.0082
ASN 4280.0089
PRO 4290.0096
TYR 4300.0049
TYR 4310.0036
LEU 4320.0033
ARG 4330.0037
VAL 4340.0039
ARG 4350.0049
ARG 4360.0061
LYS 4370.0089
ASN 4380.0096
PRO 4390.0190
VAL 4400.0193
THR 4410.0120
SER 4420.0115
THR 4430.0069
PHE 4440.0054
SER 4450.0046
LYS 4460.0044
MET 4470.0043
SER 4480.0051
LEU 4490.0042
GLN 4500.0040
LEU 4510.0024
TYR 4520.0042
GLN 4530.0055
VAL 4540.0112
ASP 4550.0148
SER 4560.0147
ARG 4570.0164
THR 4580.0138
TYR 4590.0077
LEU 4600.0058
LEU 4610.0050
ASP 4620.0065
PHE 4630.0058
ARG 4640.0057
SER 4650.0054
ILE 4660.0048
ASP 4670.0044
ASP 4680.0047
GLU 4690.0050
ILE 4700.0050
LYS 2030.0130
SER 2040.0080
PRO 2050.0038
PRO 2060.0051
ILE 2070.0061
LEU 2080.0083
PRO 2090.0078
PRO 2100.0076
HIS 2110.0065
LEU 2120.0063
LEU 2130.0068
GLN 2140.0047
VAL 2150.0043
ILE 2160.0039
LEU 2170.0079
ASN 2180.0094
LYS 2190.0073
ASP 2200.0145
THR 2210.0215
ASN 2220.0174
ILE 2230.0135
SER 2240.0114
CYS 2250.0125
ASP 2260.0111
PRO 2270.0144
ALA 2280.0116
LEU 2290.0118
LEU 2300.0136
PRO 2310.0151
GLU 2320.0130
PRO 2330.0050
ASN 2340.0026
HIS 2350.0035
VAL 2360.0044
MET 2370.0036
LEU 2380.0037
ASN 2390.0052
HIS 2400.0059
LEU 2410.0056
TYR 2420.0056
ALA 2430.0078
LEU 2440.0116
SER 2450.0232
ILE 2460.0136
LYS 2470.0283
ASP 2480.0472
SER 2490.0399
VAL 2500.0220
MET 2510.0116
VAL 2520.0097
LEU 2530.0053
SER 2540.0052
ALA 2550.0029
THR 2560.0012
HIS 2570.0052
ARG 2580.0138
TYR 2590.0244
LYS 2600.0413
LYS 2610.0415
LYS 2620.0326
TYR 2630.0131
VAL 2640.0106
THR 2650.0084
THR 2660.0047
LEU 2670.0063
LEU 2680.0072
TYR 2690.0105
LYS 2700.0144
PRO 2710.0222
PRO 5280.0207
GLY 5290.0135
SER 5300.0084
HIS 5310.0036
THR 5320.0029
ILE 5330.0024
GLU 5340.0035
PHE 5350.0036
PHE 5360.0035
GLU 5370.0023
MET 5380.0035
CYS 5390.0045
ALA 5400.0035
ASN 5410.0043
LEU 5420.0042
ILE 5430.0042
LYS 5440.0058
ILE 5450.0061
LEU 5460.0056
ALA 5470.0072
GLN 5480.0095

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.