CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0689
ARG 100.0125
VAL 110.0093
LYS 120.0072
ILE 130.0068
GLY 140.0096
HIS 150.0108
TYR 160.0072
ILE 170.0076
LEU 180.0077
GLY 190.0075
ASP 200.0056
THR 210.0036
LEU 220.0041
GLY 230.0043
VAL 240.0047
GLY 250.0058
THR 260.0061
PHE 270.0057
GLY 280.0046
LYS 290.0046
VAL 300.0050
LYS 310.0051
VAL 320.0056
GLY 330.0061
LYS 340.0073
HIS 350.0101
GLU 360.0139
LEU 370.0214
THR 380.0183
GLY 390.0124
HIS 400.0074
LYS 410.0054
VAL 420.0063
ALA 430.0059
VAL 440.0060
LYS 450.0057
ILE 460.0068
LEU 470.0079
ASN 480.0118
ARG 490.0153
GLN 500.0225
LYS 510.0227
ILE 520.0182
ARG 530.0251
SER 540.0327
LEU 550.0298
ASP 560.0288
VAL 570.0210
VAL 580.0181
GLY 590.0177
LYS 600.0107
ILE 610.0045
ARG 620.0081
ARG 630.0078
GLU 640.0048
ILE 650.0050
GLN 660.0070
ASN 670.0061
LEU 680.0062
LYS 690.0064
LEU 700.0060
PHE 710.0057
ARG 720.0054
HIS 730.0047
PRO 740.0036
HIS 750.0045
ILE 760.0050
ILE 770.0059
LYS 780.0056
LEU 790.0049
TYR 800.0049
GLN 810.0063
VAL 820.0060
ILE 830.0067
SER 840.0062
THR 850.0086
PRO 860.0097
SER 870.0134
ASP 880.0088
ILE 890.0062
PHE 900.0066
MET 910.0058
VAL 920.0058
MET 930.0056
GLU 940.0046
TYR 950.0058
VAL 960.0098
SER 970.0208
GLY 980.0240
GLY 990.0229
GLU 1000.0181
LEU 1010.0171
PHE 1020.0216
ASP 1030.0304
TYR 1040.0265
ILE 1050.0280
CYS 1060.0452
LYS 1070.0474
ASN 1080.0416
GLY 1090.0247
ARG 1100.0168
LEU 1110.0134
ASP 1120.0133
GLU 1130.0098
LYS 1140.0143
GLU 1150.0126
SER 1160.0079
ARG 1170.0052
ARG 1180.0068
LEU 1190.0063
PHE 1200.0036
GLN 1210.0026
GLN 1220.0022
ILE 1230.0054
LEU 1240.0070
SER 1250.0062
GLY 1260.0070
VAL 1270.0084
ASP 1280.0079
TYR 1290.0069
CYS 1300.0075
HIS 1310.0079
ARG 1320.0078
HIS 1330.0055
MET 1340.0057
VAL 1350.0055
VAL 1360.0082
HIS 1370.0082
ARG 1380.0080
ASP 1390.0130
LEU 1400.0120
LYS 1410.0117
PRO 1420.0123
GLU 1430.0161
ASN 1440.0128
VAL 1450.0118
LEU 1460.0126
LEU 1470.0135
ASP 1480.0166
ALA 1490.0237
HIS 1500.0221
MET 1510.0182
ASN 1520.0114
ALA 1530.0090
LYS 1540.0062
ILE 1550.0077
ALA 1560.0097
ASP 1570.0068
PHE 1580.0068
GLY 1590.0065
LEU 1600.0058
SER 1610.0060
ASN 1620.0060
MET 1630.0041
MET 1640.0048
SER 1650.0069
ASP 1660.0068
GLY 1670.0059
GLU 1680.0068
PHE 1690.0027
LEU 1700.0026
ARG 1710.0027
SER 1730.0061
CYS 1740.0066
GLY 1750.0080
SER 1760.0125
PRO 1770.0093
ASN 1780.0118
TYR 1790.0108
ALA 1800.0101
ALA 1810.0098
PRO 1820.0051
GLU 1830.0051
VAL 1840.0054
ILE 1850.0034
SER 1860.0027
GLY 1870.0033
ARG 1880.0012
LEU 1890.0013
TYR 1900.0030
ALA 1910.0032
GLY 1920.0051
PRO 1930.0080
GLU 1940.0086
VAL 1950.0085
ASP 1960.0090
ILE 1970.0113
TRP 1980.0105
SER 1990.0107
SER 2000.0112
GLY 2010.0112
VAL 2020.0113
ILE 2030.0103
LEU 2040.0085
TYR 2050.0101
ALA 2060.0110
LEU 2070.0075
LEU 2080.0056
CYS 2090.0101
GLY 2100.0121
THR 2110.0149
LEU 2120.0149
PRO 2130.0114
PHE 2140.0099
ASP 2150.0247
ASP 2160.0348
ASP 2170.0492
HIS 2180.0528
VAL 2190.0395
PRO 2200.0409
THR 2210.0344
LEU 2220.0227
PHE 2230.0152
LYS 2240.0195
LYS 2250.0125
ILE 2260.0033
CYS 2270.0076
ASP 2280.0078
GLY 2290.0069
ILE 2300.0070
PHE 2310.0094
TYR 2320.0120
THR 2330.0107
PRO 2340.0102
GLN 2350.0081
TYR 2360.0052
LEU 2370.0052
ASN 2380.0067
PRO 2390.0096
SER 2400.0105
VAL 2410.0075
ILE 2420.0090
SER 2430.0111
LEU 2440.0101
LEU 2450.0102
LYS 2460.0103
HIS 2470.0111
MET 2480.0106
LEU 2490.0098
GLN 2500.0095
VAL 2510.0058
ASP 2520.0063
PRO 2530.0072
MET 2540.0073
LYS 2550.0081
ARG 2560.0087
ALA 2570.0118
THR 2580.0136
ILE 2590.0119
LYS 2600.0173
ASP 2610.0155
ILE 2620.0116
ARG 2630.0110
GLU 2640.0153
HIS 2650.0139
GLU 2660.0157
TRP 2670.0113
PHE 2680.0087
LYS 2690.0124
GLN 2700.0130
ASP 2710.0125
LEU 2720.0040
PRO 2730.0027
LYS 2740.0078
TYR 2750.0088
LEU 2760.0090
PHE 2770.0120
PRO 2780.0194
GLU 2790.0189
ASP 2800.0150
ALA 3210.0689
VAL 3220.0266
ALA 3230.0259
TYR 3240.0441
HIS 3250.0218
LEU 3260.0241
ILE 3270.0435
ILE 3280.0289
ASP 3290.0235
ASN 3300.0297
ARG 3310.0162
ARG 3320.0352
ILE 3330.0505
MET 3340.0437
ASN 3350.0484
GLU 3360.0573
ALA 3370.0450
LYS 3380.0370
ASP 3390.0228
PHE 3400.0388
TYR 3410.0328
LEU 3420.0129
ALA 3430.0049
THR 3440.0057
SER 3450.0161
PRO 3460.0225
PRO 3470.0325
ASP 3480.0365
SER 3490.0239
PHE 3500.0235
LEU 3510.0230
ASP 3520.0111
ASP 3530.0332
HIS 3540.0359
HIS 3550.0313
LEU 3560.0475
THR 3570.0254
ARG 3580.0146
PRO 3590.0081
HIS 3600.0092
PRO 3610.0049
GLU 3620.0028
ARG 3630.0049
VAL 3640.0073
PRO 3650.0127
PHE 3660.0142
LEU 3670.0149
VAL 3680.0163
ALA 3690.0130
GLU 3700.0103
THR 3710.0157
PRO 3720.0171
ARG 3730.0195
ALA 3740.0371
ALA 3940.0166
LYS 3950.0151
TRP 3960.0121
HIS 3970.0114
LEU 3980.0108
GLY 3990.0097
ILE 4000.0085
ARG 4010.0065
SER 4020.0061
GLN 4030.0103
SER 4040.0104
ARG 4050.0098
PRO 4060.0063
ASN 4070.0083
ASP 4080.0097
ILE 4090.0058
MET 4100.0047
ALA 4110.0069
GLU 4120.0051
VAL 4130.0034
CYS 4140.0043
ARG 4150.0053
ALA 4160.0035
ILE 4170.0028
LYS 4180.0052
GLN 4190.0049
LEU 4200.0025
ASP 4210.0025
TYR 4220.0032
GLU 4230.0058
TRP 4240.0061
LYS 4250.0084
VAL 4260.0088
VAL 4270.0106
ASN 4280.0097
PRO 4290.0086
TYR 4300.0045
TYR 4310.0053
LEU 4320.0050
ARG 4330.0063
VAL 4340.0048
ARG 4350.0056
ARG 4360.0050
LYS 4370.0070
ASN 4380.0075
PRO 4390.0119
VAL 4400.0135
THR 4410.0131
SER 4420.0112
THR 4430.0098
PHE 4440.0080
SER 4450.0068
LYS 4460.0066
MET 4470.0064
SER 4480.0067
LEU 4490.0053
GLN 4500.0054
LEU 4510.0036
TYR 4520.0038
GLN 4530.0035
VAL 4540.0057
ASP 4550.0063
SER 4560.0055
ARG 4570.0081
THR 4580.0072
TYR 4590.0044
LEU 4600.0061
LEU 4610.0062
ASP 4620.0074
PHE 4630.0073
ARG 4640.0075
SER 4650.0074
ILE 4660.0075
ASP 4670.0076
ASP 4680.0077
GLU 4690.0055
ILE 4700.0118
LYS 2030.0068
SER 2040.0053
PRO 2050.0037
PRO 2060.0037
ILE 2070.0037
LEU 2080.0049
PRO 2090.0018
PRO 2100.0013
HIS 2110.0005
LEU 2120.0046
LEU 2130.0043
GLN 2140.0034
VAL 2150.0070
ILE 2160.0044
LEU 2170.0060
ASN 2180.0106
LYS 2190.0069
ASP 2200.0088
THR 2210.0123
ASN 2220.0129
ILE 2230.0109
SER 2240.0125
CYS 2250.0142
ASP 2260.0150
PRO 2270.0131
ALA 2280.0111
LEU 2290.0087
LEU 2300.0031
PRO 2310.0057
GLU 2320.0093
PRO 2330.0073
ASN 2340.0050
HIS 2350.0062
VAL 2360.0048
MET 2370.0043
LEU 2380.0063
ASN 2390.0072
HIS 2400.0078
LEU 2410.0074
TYR 2420.0080
ALA 2430.0088
LEU 2440.0115
SER 2450.0232
ILE 2460.0172
LYS 2470.0255
ASP 2480.0307
SER 2490.0236
VAL 2500.0188
MET 2510.0116
VAL 2520.0104
LEU 2530.0066
SER 2540.0059
ALA 2550.0056
THR 2560.0044
HIS 2570.0100
ARG 2580.0180
TYR 2590.0287
LYS 2600.0473
LYS 2610.0471
LYS 2620.0337
TYR 2630.0142
VAL 2640.0101
THR 2650.0046
THR 2660.0031
LEU 2670.0051
LEU 2680.0054
TYR 2690.0100
LYS 2700.0117
PRO 2710.0183
PRO 5280.0141
GLY 5290.0100
SER 5300.0091
HIS 5310.0062
THR 5320.0071
ILE 5330.0058
GLU 5340.0051
PHE 5350.0058
PHE 5360.0062
GLU 5370.0043
MET 5380.0040
CYS 5390.0054
ALA 5400.0053
ASN 5410.0038
LEU 5420.0030
ILE 5430.0044
LYS 5440.0055
ILE 5450.0041
LEU 5460.0036
ALA 5470.0046
GLN 5480.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.