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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0618
ARG 100.0183
VAL 110.0172
LYS 120.0099
ILE 130.0114
GLY 140.0131
HIS 150.0104
TYR 160.0053
ILE 170.0091
LEU 180.0154
GLY 190.0177
ASP 200.0174
THR 210.0173
LEU 220.0165
GLY 230.0181
VAL 240.0188
GLY 250.0155
THR 260.0218
PHE 270.0169
GLY 280.0189
LYS 290.0150
VAL 300.0157
LYS 310.0175
VAL 320.0168
GLY 330.0132
LYS 340.0171
HIS 350.0146
GLU 360.0178
LEU 370.0291
THR 380.0324
GLY 390.0292
HIS 400.0167
LYS 410.0171
VAL 420.0137
ALA 430.0159
VAL 440.0145
LYS 450.0159
ILE 460.0142
LEU 470.0194
ASN 480.0206
ARG 490.0272
GLN 500.0334
LYS 510.0350
ILE 520.0326
ARG 530.0400
SER 540.0467
LEU 550.0468
ASP 560.0485
VAL 570.0424
VAL 580.0349
GLY 590.0387
LYS 600.0303
ILE 610.0196
ARG 620.0258
ARG 630.0218
GLU 640.0135
ILE 650.0168
GLN 660.0201
ASN 670.0132
LEU 680.0124
LYS 690.0159
LEU 700.0119
PHE 710.0090
ARG 720.0123
HIS 730.0125
PRO 740.0116
HIS 750.0118
ILE 760.0105
ILE 770.0098
LYS 780.0115
LEU 790.0145
TYR 800.0161
GLN 810.0166
VAL 820.0174
ILE 830.0164
SER 840.0160
THR 850.0159
PRO 860.0177
SER 870.0206
ASP 880.0171
ILE 890.0169
PHE 900.0161
MET 910.0140
VAL 920.0140
MET 930.0159
GLU 940.0150
TYR 950.0155
VAL 960.0128
SER 970.0190
GLY 980.0203
GLY 990.0165
GLU 1000.0156
LEU 1010.0130
PHE 1020.0126
ASP 1030.0134
TYR 1040.0106
ILE 1050.0078
CYS 1060.0093
LYS 1070.0082
ASN 1080.0037
GLY 1090.0087
ARG 1100.0062
LEU 1110.0086
ASP 1120.0149
GLU 1130.0170
LYS 1140.0205
GLU 1150.0120
SER 1160.0073
ARG 1170.0122
ARG 1180.0129
LEU 1190.0102
PHE 1200.0096
GLN 1210.0120
GLN 1220.0138
ILE 1230.0124
LEU 1240.0122
SER 1250.0130
GLY 1260.0132
VAL 1270.0106
ASP 1280.0137
TYR 1290.0096
CYS 1300.0085
HIS 1310.0119
ARG 1320.0138
HIS 1330.0051
MET 1340.0050
VAL 1350.0051
VAL 1360.0072
HIS 1370.0080
ARG 1380.0082
ASP 1390.0101
LEU 1400.0104
LYS 1410.0118
PRO 1420.0122
GLU 1430.0133
ASN 1440.0121
VAL 1450.0129
LEU 1460.0143
LEU 1470.0153
ASP 1480.0194
ALA 1490.0238
HIS 1500.0202
MET 1510.0131
ASN 1520.0135
ALA 1530.0124
LYS 1540.0128
ILE 1550.0110
ALA 1560.0098
ASP 1570.0070
PHE 1580.0044
GLY 1590.0028
LEU 1600.0050
SER 1610.0046
ASN 1620.0044
MET 1630.0031
MET 1640.0041
SER 1650.0033
ASP 1660.0015
GLY 1670.0013
GLU 1680.0029
PHE 1690.0053
LEU 1700.0072
ARG 1710.0092
SER 1730.0115
CYS 1740.0112
GLY 1750.0087
SER 1760.0111
PRO 1770.0114
ASN 1780.0099
TYR 1790.0111
ALA 1800.0115
ALA 1810.0116
PRO 1820.0121
GLU 1830.0125
VAL 1840.0131
ILE 1850.0154
SER 1860.0158
GLY 1870.0160
ARG 1880.0118
LEU 1890.0092
TYR 1900.0069
ALA 1910.0061
GLY 1920.0079
PRO 1930.0092
GLU 1940.0105
VAL 1950.0107
ASP 1960.0110
ILE 1970.0114
TRP 1980.0113
SER 1990.0117
SER 2000.0108
GLY 2010.0094
VAL 2020.0094
ILE 2030.0080
LEU 2040.0054
TYR 2050.0049
ALA 2060.0044
LEU 2070.0029
LEU 2080.0053
CYS 2090.0054
GLY 2100.0051
THR 2110.0084
LEU 2120.0121
PRO 2130.0137
PHE 2140.0129
ASP 2150.0197
ASP 2160.0323
ASP 2170.0527
HIS 2180.0441
VAL 2190.0369
PRO 2200.0285
THR 2210.0175
LEU 2220.0149
PHE 2230.0112
LYS 2240.0100
LYS 2250.0141
ILE 2260.0132
CYS 2270.0173
ASP 2280.0206
GLY 2290.0213
ILE 2300.0252
PHE 2310.0211
TYR 2320.0217
THR 2330.0205
PRO 2340.0302
GLN 2350.0372
TYR 2360.0324
LEU 2370.0234
ASN 2380.0243
PRO 2390.0215
SER 2400.0178
VAL 2410.0116
ILE 2420.0107
SER 2430.0063
LEU 2440.0039
LEU 2450.0053
LYS 2460.0092
HIS 2470.0081
MET 2480.0094
LEU 2490.0112
GLN 2500.0138
VAL 2510.0142
ASP 2520.0152
PRO 2530.0150
MET 2540.0132
LYS 2550.0139
ARG 2560.0134
ALA 2570.0105
THR 2580.0147
ILE 2590.0150
LYS 2600.0206
ASP 2610.0133
ILE 2620.0120
ARG 2630.0182
GLU 2640.0185
HIS 2650.0140
GLU 2660.0196
TRP 2670.0174
PHE 2680.0175
LYS 2690.0249
GLN 2700.0275
ASP 2710.0325
LEU 2720.0276
PRO 2730.0305
LYS 2740.0356
TYR 2750.0334
LEU 2760.0256
PHE 2770.0287
PRO 2780.0380
GLU 2790.0403
ASP 2800.0488
ALA 3210.0312
VAL 3220.0133
ALA 3230.0240
TYR 3240.0247
HIS 3250.0115
LEU 3260.0161
ILE 3270.0276
ILE 3280.0203
ASP 3290.0036
ASN 3300.0055
ARG 3310.0105
ARG 3320.0115
ILE 3330.0136
MET 3340.0203
ASN 3350.0175
GLU 3360.0128
ALA 3370.0141
LYS 3380.0135
ASP 3390.0104
PHE 3400.0179
TYR 3410.0178
LEU 3420.0090
ALA 3430.0043
THR 3440.0026
SER 3450.0085
PRO 3460.0133
PRO 3470.0219
ASP 3480.0226
SER 3490.0128
PHE 3500.0193
LEU 3510.0241
ASP 3520.0090
ASP 3530.0231
HIS 3540.0256
HIS 3550.0167
LEU 3560.0265
THR 3570.0150
ARG 3580.0050
PRO 3590.0068
HIS 3600.0053
PRO 3610.0074
GLU 3620.0043
ARG 3630.0024
VAL 3640.0056
PRO 3650.0078
PHE 3660.0092
LEU 3670.0096
VAL 3680.0103
ALA 3690.0095
GLU 3700.0096
THR 3710.0101
PRO 3720.0141
ARG 3730.0156
ALA 3740.0140
ALA 3940.0056
LYS 3950.0060
TRP 3960.0048
HIS 3970.0045
LEU 3980.0045
GLY 3990.0039
ILE 4000.0057
ARG 4010.0060
SER 4020.0084
GLN 4030.0110
SER 4040.0094
ARG 4050.0065
PRO 4060.0060
ASN 4070.0101
ASP 4080.0115
ILE 4090.0077
MET 4100.0077
ALA 4110.0097
GLU 4120.0063
VAL 4130.0039
CYS 4140.0031
ARG 4150.0048
ALA 4160.0049
ILE 4170.0029
LYS 4180.0046
GLN 4190.0073
LEU 4200.0073
ASP 4210.0080
TYR 4220.0062
GLU 4230.0064
TRP 4240.0022
LYS 4250.0029
VAL 4260.0044
VAL 4270.0074
ASN 4280.0094
PRO 4290.0098
TYR 4300.0067
TYR 4310.0057
LEU 4320.0039
ARG 4330.0041
VAL 4340.0034
ARG 4350.0063
ARG 4360.0101
LYS 4370.0102
ASN 4380.0059
PRO 4390.0123
VAL 4400.0089
THR 4410.0054
SER 4420.0088
THR 4430.0095
PHE 4440.0108
SER 4450.0075
LYS 4460.0060
MET 4470.0046
SER 4480.0035
LEU 4490.0031
GLN 4500.0045
LEU 4510.0038
TYR 4520.0042
GLN 4530.0063
VAL 4540.0083
ASP 4550.0121
SER 4560.0129
ARG 4570.0108
THR 4580.0093
TYR 4590.0052
LEU 4600.0043
LEU 4610.0040
ASP 4620.0037
PHE 4630.0037
ARG 4640.0042
SER 4650.0043
ILE 4660.0067
ASP 4670.0081
ASP 4680.0077
GLU 4690.0033
ILE 4700.0088
LYS 2030.0098
SER 2040.0068
PRO 2050.0054
PRO 2060.0072
ILE 2070.0085
LEU 2080.0075
PRO 2090.0066
PRO 2100.0064
HIS 2110.0056
LEU 2120.0039
LEU 2130.0053
GLN 2140.0053
VAL 2150.0067
ILE 2160.0066
LEU 2170.0056
ASN 2180.0053
LYS 2190.0059
ASP 2200.0067
THR 2210.0059
ASN 2220.0042
ILE 2230.0032
SER 2240.0037
CYS 2250.0013
ASP 2260.0044
PRO 2270.0045
ALA 2280.0086
LEU 2290.0074
LEU 2300.0082
PRO 2310.0081
GLU 2320.0082
PRO 2330.0042
ASN 2340.0024
HIS 2350.0014
VAL 2360.0019
MET 2370.0031
LEU 2380.0026
ASN 2390.0038
HIS 2400.0038
LEU 2410.0038
TYR 2420.0036
ALA 2430.0029
LEU 2440.0034
SER 2450.0105
ILE 2460.0100
LYS 2470.0152
ASP 2480.0202
SER 2490.0174
VAL 2500.0121
MET 2510.0061
VAL 2520.0028
LEU 2530.0010
SER 2540.0037
ALA 2550.0042
THR 2560.0047
HIS 2570.0044
ARG 2580.0034
TYR 2590.0056
LYS 2600.0108
LYS 2610.0082
LYS 2620.0064
TYR 2630.0028
VAL 2640.0040
THR 2650.0049
THR 2660.0050
LEU 2670.0029
LEU 2680.0020
TYR 2690.0045
LYS 2700.0084
PRO 2710.0141
PRO 5280.0618
GLY 5290.0345
SER 5300.0110
HIS 5310.0059
THR 5320.0053
ILE 5330.0049
GLU 5340.0044
PHE 5350.0035
PHE 5360.0027
GLU 5370.0037
MET 5380.0035
CYS 5390.0015
ALA 5400.0029
ASN 5410.0040
LEU 5420.0022
ILE 5430.0025
LYS 5440.0059
ILE 5450.0070
LEU 5460.0059
ALA 5470.0087
GLN 5480.0119

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.