CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0945
ARG 100.0029
VAL 110.0025
LYS 120.0030
ILE 130.0023
GLY 140.0040
HIS 150.0048
TYR 160.0030
ILE 170.0032
LEU 180.0026
GLY 190.0038
ASP 200.0047
THR 210.0042
LEU 220.0050
GLY 230.0049
VAL 240.0047
GLY 250.0042
THR 260.0046
PHE 270.0042
GLY 280.0044
LYS 290.0037
VAL 300.0041
LYS 310.0035
VAL 320.0039
GLY 330.0029
LYS 340.0044
HIS 350.0051
GLU 360.0062
LEU 370.0080
THR 380.0082
GLY 390.0073
HIS 400.0048
LYS 410.0040
VAL 420.0030
ALA 430.0037
VAL 440.0031
LYS 450.0035
ILE 460.0039
LEU 470.0041
ASN 480.0039
ARG 490.0044
GLN 500.0045
LYS 510.0042
ILE 520.0043
ARG 530.0047
SER 540.0042
LEU 550.0050
ASP 560.0064
VAL 570.0056
VAL 580.0061
GLY 590.0066
LYS 600.0046
ILE 610.0036
ARG 620.0049
ARG 630.0036
GLU 640.0024
ILE 650.0036
GLN 660.0037
ASN 670.0023
LEU 680.0026
LYS 690.0038
LEU 700.0029
PHE 710.0028
ARG 720.0040
HIS 730.0044
PRO 740.0043
HIS 750.0043
ILE 760.0034
ILE 770.0027
LYS 780.0027
LEU 790.0038
TYR 800.0043
GLN 810.0042
VAL 820.0042
ILE 830.0041
SER 840.0041
THR 850.0044
PRO 860.0044
SER 870.0042
ASP 880.0037
ILE 890.0038
PHE 900.0038
MET 910.0033
VAL 920.0032
MET 930.0037
GLU 940.0030
TYR 950.0027
VAL 960.0045
SER 970.0090
GLY 980.0104
GLY 990.0091
GLU 1000.0078
LEU 1010.0068
PHE 1020.0073
ASP 1030.0093
TYR 1040.0078
ILE 1050.0066
CYS 1060.0093
LYS 1070.0103
ASN 1080.0079
GLY 1090.0029
ARG 1100.0009
LEU 1110.0029
ASP 1120.0043
GLU 1130.0045
LYS 1140.0060
GLU 1150.0038
SER 1160.0018
ARG 1170.0020
ARG 1180.0033
LEU 1190.0035
PHE 1200.0027
GLN 1210.0028
GLN 1220.0040
ILE 1230.0041
LEU 1240.0044
SER 1250.0045
GLY 1260.0049
VAL 1270.0043
ASP 1280.0053
TYR 1290.0043
CYS 1300.0033
HIS 1310.0040
ARG 1320.0048
HIS 1330.0017
MET 1340.0021
VAL 1350.0022
VAL 1360.0025
HIS 1370.0028
ARG 1380.0030
ASP 1390.0045
LEU 1400.0043
LYS 1410.0047
PRO 1420.0049
GLU 1430.0064
ASN 1440.0053
VAL 1450.0050
LEU 1460.0060
LEU 1470.0067
ASP 1480.0087
ALA 1490.0109
HIS 1500.0093
MET 1510.0068
ASN 1520.0057
ALA 1530.0050
LYS 1540.0043
ILE 1550.0037
ALA 1560.0037
ASP 1570.0032
PHE 1580.0025
GLY 1590.0021
LEU 1600.0024
SER 1610.0020
ASN 1620.0017
MET 1630.0019
MET 1640.0028
SER 1650.0038
ASP 1660.0048
GLY 1670.0055
GLU 1680.0054
PHE 1690.0029
LEU 1700.0018
ARG 1710.0020
SER 1730.0038
CYS 1740.0037
GLY 1750.0032
SER 1760.0048
PRO 1770.0035
ASN 1780.0028
TYR 1790.0042
ALA 1800.0046
ALA 1810.0049
PRO 1820.0041
GLU 1830.0040
VAL 1840.0040
ILE 1850.0049
SER 1860.0044
GLY 1870.0034
ARG 1880.0023
LEU 1890.0019
TYR 1900.0020
ALA 1910.0019
GLY 1920.0015
PRO 1930.0030
GLU 1940.0036
VAL 1950.0037
ASP 1960.0035
ILE 1970.0046
TRP 1980.0044
SER 1990.0041
SER 2000.0041
GLY 2010.0038
VAL 2020.0036
ILE 2030.0033
LEU 2040.0020
TYR 2050.0027
ALA 2060.0027
LEU 2070.0008
LEU 2080.0018
CYS 2090.0029
GLY 2100.0024
THR 2110.0043
LEU 2120.0025
PRO 2130.0036
PHE 2140.0032
ASP 2150.0029
ASP 2160.0086
ASP 2170.0155
HIS 2180.0112
VAL 2190.0071
PRO 2200.0017
THR 2210.0045
LEU 2220.0020
PHE 2230.0027
LYS 2240.0050
LYS 2250.0054
ILE 2260.0049
CYS 2270.0067
ASP 2280.0081
GLY 2290.0077
ILE 2300.0094
PHE 2310.0083
TYR 2320.0084
THR 2330.0090
PRO 2340.0110
GLN 2350.0125
TYR 2360.0109
LEU 2370.0083
ASN 2380.0081
PRO 2390.0083
SER 2400.0056
VAL 2410.0039
ILE 2420.0058
SER 2430.0054
LEU 2440.0038
LEU 2450.0043
LYS 2460.0059
HIS 2470.0059
MET 2480.0049
LEU 2490.0052
GLN 2500.0061
VAL 2510.0053
ASP 2520.0054
PRO 2530.0054
MET 2540.0051
LYS 2550.0060
ARG 2560.0059
ALA 2570.0059
THR 2580.0064
ILE 2590.0058
LYS 2600.0072
ASP 2610.0060
ILE 2620.0039
ARG 2630.0039
GLU 2640.0027
HIS 2650.0018
GLU 2660.0023
TRP 2670.0025
PHE 2680.0013
LYS 2690.0030
GLN 2700.0052
ASP 2710.0078
LEU 2720.0074
PRO 2730.0095
LYS 2740.0114
TYR 2750.0106
LEU 2760.0083
PHE 2770.0091
PRO 2780.0129
GLU 2790.0140
ASP 2800.0156
ALA 3210.0359
VAL 3220.0379
ALA 3230.0292
TYR 3240.0282
HIS 3250.0251
LEU 3260.0085
ILE 3270.0115
ILE 3280.0134
ASP 3290.0198
ASN 3300.0224
ARG 3310.0197
ARG 3320.0217
ILE 3330.0272
MET 3340.0247
ASN 3350.0185
GLU 3360.0151
ALA 3370.0146
LYS 3380.0147
ASP 3390.0203
PHE 3400.0248
TYR 3410.0213
LEU 3420.0234
ALA 3430.0245
THR 3440.0193
SER 3450.0300
PRO 3460.0454
PRO 3470.0652
ASP 3480.0414
SER 3490.0205
PHE 3500.0624
LEU 3510.0572
ASP 3520.0326
ASP 3530.0712
HIS 3540.0538
HIS 3550.0422
LEU 3560.0945
THR 3570.0374
ARG 3580.0151
PRO 3590.0194
HIS 3600.0259
PRO 3610.0386
GLU 3620.0337
ARG 3630.0143
VAL 3640.0172
PRO 3650.0138
PHE 3660.0122
LEU 3670.0162
VAL 3680.0258
ALA 3690.0308
GLU 3700.0260
THR 3710.0201
PRO 3720.0190
ARG 3730.0246
ALA 3740.0374
ALA 3940.0038
LYS 3950.0029
TRP 3960.0016
HIS 3970.0030
LEU 3980.0055
GLY 3990.0063
ILE 4000.0056
ARG 4010.0068
SER 4020.0072
GLN 4030.0148
SER 4040.0136
ARG 4050.0146
PRO 4060.0104
ASN 4070.0084
ASP 4080.0104
ILE 4090.0061
MET 4100.0041
ALA 4110.0053
GLU 4120.0027
VAL 4130.0014
CYS 4140.0018
ARG 4150.0030
ALA 4160.0034
ILE 4170.0044
LYS 4180.0054
GLN 4190.0065
LEU 4200.0079
ASP 4210.0083
TYR 4220.0068
GLU 4230.0056
TRP 4240.0042
LYS 4250.0036
VAL 4260.0033
VAL 4270.0052
ASN 4280.0057
PRO 4290.0053
TYR 4300.0060
TYR 4310.0061
LEU 4320.0051
ARG 4330.0051
VAL 4340.0057
ARG 4350.0074
ARG 4360.0091
LYS 4370.0129
ASN 4380.0183
PRO 4390.0334
VAL 4400.0380
THR 4410.0292
SER 4420.0231
THR 4430.0153
PHE 4440.0097
SER 4450.0096
LYS 4460.0081
MET 4470.0081
SER 4480.0079
LEU 4490.0067
GLN 4500.0075
LEU 4510.0065
TYR 4520.0087
GLN 4530.0103
VAL 4540.0162
ASP 4550.0206
SER 4560.0234
ARG 4570.0209
THR 4580.0162
TYR 4590.0108
LEU 4600.0075
LEU 4610.0063
ASP 4620.0076
PHE 4630.0076
ARG 4640.0086
SER 4650.0092
ILE 4660.0106
ASP 4670.0118
ASP 4680.0104
GLU 4690.0067
ILE 4700.0053
LYS 2030.0110
SER 2040.0097
PRO 2050.0082
PRO 2060.0083
ILE 2070.0083
LEU 2080.0087
PRO 2090.0041
PRO 2100.0025
HIS 2110.0022
LEU 2120.0032
LEU 2130.0032
GLN 2140.0025
VAL 2150.0091
ILE 2160.0105
LEU 2170.0109
ASN 2180.0134
LYS 2190.0225
ASP 2200.0351
THR 2210.0331
ASN 2220.0186
ILE 2230.0095
SER 2240.0078
CYS 2250.0188
ASP 2260.0341
PRO 2270.0362
ALA 2280.0463
LEU 2290.0388
LEU 2300.0312
PRO 2310.0289
GLU 2320.0253
PRO 2330.0072
ASN 2340.0053
HIS 2350.0024
VAL 2360.0048
MET 2370.0042
LEU 2380.0037
ASN 2390.0072
HIS 2400.0070
LEU 2410.0065
TYR 2420.0025
ALA 2430.0015
LEU 2440.0008
SER 2450.0050
ILE 2460.0052
LYS 2470.0102
ASP 2480.0183
SER 2490.0165
VAL 2500.0084
MET 2510.0044
VAL 2520.0033
LEU 2530.0040
SER 2540.0048
ALA 2550.0051
THR 2560.0042
HIS 2570.0069
ARG 2580.0106
TYR 2590.0174
LYS 2600.0204
LYS 2610.0236
LYS 2620.0203
TYR 2630.0139
VAL 2640.0142
THR 2650.0115
THR 2660.0050
LEU 2670.0050
LEU 2680.0049
TYR 2690.0056
LYS 2700.0073
PRO 2710.0101
PRO 5280.0253
GLY 5290.0205
SER 5300.0164
HIS 5310.0108
THR 5320.0105
ILE 5330.0101
GLU 5340.0104
PHE 5350.0091
PHE 5360.0086
GLU 5370.0095
MET 5380.0092
CYS 5390.0086
ALA 5400.0082
ASN 5410.0076
LEU 5420.0065
ILE 5430.0061
LYS 5440.0067
ILE 5450.0049
LEU 5460.0038
ALA 5470.0062
GLN 5480.0047

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.