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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0779
ARG 100.0409
VAL 110.0349
LYS 120.0253
ILE 130.0195
GLY 140.0205
HIS 150.0138
TYR 160.0124
ILE 170.0187
LEU 180.0225
GLY 190.0335
ASP 200.0346
THR 210.0256
LEU 220.0227
GLY 230.0144
VAL 240.0099
GLY 250.0086
THR 260.0113
PHE 270.0089
GLY 280.0038
LYS 290.0045
VAL 300.0094
LYS 310.0178
VAL 320.0173
GLY 330.0136
LYS 340.0150
HIS 350.0135
GLU 360.0124
LEU 370.0225
THR 380.0310
GLY 390.0253
HIS 400.0176
LYS 410.0138
VAL 420.0101
ALA 430.0107
VAL 440.0085
LYS 450.0061
ILE 460.0042
LEU 470.0062
ASN 480.0154
ARG 490.0219
GLN 500.0254
LYS 510.0159
ILE 520.0021
ARG 530.0082
SER 540.0083
LEU 550.0166
ASP 560.0286
VAL 570.0235
VAL 580.0228
GLY 590.0270
LYS 600.0195
ILE 610.0115
ARG 620.0143
ARG 630.0125
GLU 640.0089
ILE 650.0088
GLN 660.0102
ASN 670.0083
LEU 680.0066
LYS 690.0076
LEU 700.0072
PHE 710.0064
ARG 720.0058
HIS 730.0069
PRO 740.0064
HIS 750.0065
ILE 760.0062
ILE 770.0064
LYS 780.0061
LEU 790.0096
TYR 800.0108
GLN 810.0102
VAL 820.0174
ILE 830.0182
SER 840.0228
THR 850.0360
PRO 860.0477
SER 870.0383
ASP 880.0209
ILE 890.0154
PHE 900.0105
MET 910.0080
VAL 920.0086
MET 930.0089
GLU 940.0084
TYR 950.0081
VAL 960.0091
SER 970.0094
GLY 980.0109
GLY 990.0113
GLU 1000.0124
LEU 1010.0114
PHE 1020.0108
ASP 1030.0128
TYR 1040.0125
ILE 1050.0102
CYS 1060.0110
LYS 1070.0149
ASN 1080.0136
GLY 1090.0096
ARG 1100.0069
LEU 1110.0069
ASP 1120.0047
GLU 1130.0048
LYS 1140.0072
GLU 1150.0076
SER 1160.0064
ARG 1170.0080
ARG 1180.0073
LEU 1190.0087
PHE 1200.0086
GLN 1210.0081
GLN 1220.0082
ILE 1230.0080
LEU 1240.0079
SER 1250.0068
GLY 1260.0070
VAL 1270.0068
ASP 1280.0068
TYR 1290.0070
CYS 1300.0063
HIS 1310.0061
ARG 1320.0068
HIS 1330.0054
MET 1340.0040
VAL 1350.0040
VAL 1360.0074
HIS 1370.0073
ARG 1380.0069
ASP 1390.0100
LEU 1400.0100
LYS 1410.0097
PRO 1420.0105
GLU 1430.0111
ASN 1440.0112
VAL 1450.0104
LEU 1460.0104
LEU 1470.0102
ASP 1480.0111
ALA 1490.0127
HIS 1500.0131
MET 1510.0093
ASN 1520.0093
ALA 1530.0087
LYS 1540.0083
ILE 1550.0088
ALA 1560.0093
ASP 1570.0081
PHE 1580.0081
GLY 1590.0084
LEU 1600.0068
SER 1610.0067
ASN 1620.0069
MET 1630.0044
MET 1640.0016
SER 1650.0014
ASP 1660.0030
GLY 1670.0023
GLU 1680.0022
PHE 1690.0042
LEU 1700.0051
ARG 1710.0067
SER 1730.0088
CYS 1740.0088
GLY 1750.0085
SER 1760.0110
PRO 1770.0089
ASN 1780.0085
TYR 1790.0087
ALA 1800.0096
ALA 1810.0100
PRO 1820.0094
GLU 1830.0099
VAL 1840.0098
ILE 1850.0103
SER 1860.0110
GLY 1870.0114
ARG 1880.0094
LEU 1890.0076
TYR 1900.0064
ALA 1910.0042
GLY 1920.0051
PRO 1930.0061
GLU 1940.0081
VAL 1950.0079
ASP 1960.0076
ILE 1970.0100
TRP 1980.0091
SER 1990.0091
SER 2000.0097
GLY 2010.0086
VAL 2020.0077
ILE 2030.0082
LEU 2040.0076
TYR 2050.0055
ALA 2060.0057
LEU 2070.0066
LEU 2080.0041
CYS 2090.0037
GLY 2100.0058
THR 2110.0048
LEU 2120.0063
PRO 2130.0045
PHE 2140.0047
ASP 2150.0077
ASP 2160.0100
ASP 2170.0156
HIS 2180.0120
VAL 2190.0076
PRO 2200.0057
THR 2210.0075
LEU 2220.0054
PHE 2230.0064
LYS 2240.0078
LYS 2250.0063
ILE 2260.0070
CYS 2270.0091
ASP 2280.0090
GLY 2290.0094
ILE 2300.0087
PHE 2310.0059
TYR 2320.0052
THR 2330.0055
PRO 2340.0063
GLN 2350.0090
TYR 2360.0046
LEU 2370.0032
ASN 2380.0053
PRO 2390.0082
SER 2400.0095
VAL 2410.0084
ILE 2420.0077
SER 2430.0103
LEU 2440.0105
LEU 2450.0083
LYS 2460.0091
HIS 2470.0108
MET 2480.0101
LEU 2490.0090
GLN 2500.0101
VAL 2510.0099
ASP 2520.0103
PRO 2530.0107
MET 2540.0110
LYS 2550.0115
ARG 2560.0112
ALA 2570.0104
THR 2580.0113
ILE 2590.0109
LYS 2600.0130
ASP 2610.0121
ILE 2620.0111
ARG 2630.0111
GLU 2640.0113
HIS 2650.0112
GLU 2660.0117
TRP 2670.0101
PHE 2680.0106
LYS 2690.0123
GLN 2700.0126
ASP 2710.0133
LEU 2720.0123
PRO 2730.0123
LYS 2740.0111
TYR 2750.0112
LEU 2760.0097
PHE 2770.0086
PRO 2780.0090
GLU 2790.0141
ASP 2800.0141
ALA 3210.0556
VAL 3220.0168
ALA 3230.0335
TYR 3240.0303
HIS 3250.0238
LEU 3260.0253
ILE 3270.0342
ILE 3280.0273
ASP 3290.0239
ASN 3300.0211
ARG 3310.0278
ARG 3320.0484
ILE 3330.0588
MET 3340.0380
ASN 3350.0596
GLU 3360.0779
ALA 3370.0636
LYS 3380.0456
ASP 3390.0323
PHE 3400.0269
TYR 3410.0078
LEU 3420.0093
ALA 3430.0100
THR 3440.0148
SER 3450.0162
PRO 3460.0200
PRO 3470.0207
ASP 3480.0153
SER 3490.0126
PHE 3500.0281
LEU 3510.0216
ASP 3520.0251
ASP 3530.0091
HIS 3540.0174
HIS 3550.0119
LEU 3560.0146
THR 3570.0115
ARG 3580.0135
PRO 3590.0123
HIS 3600.0122
PRO 3610.0113
GLU 3620.0110
ARG 3630.0099
VAL 3640.0063
PRO 3650.0148
PHE 3660.0155
LEU 3670.0128
VAL 3680.0145
ALA 3690.0136
GLU 3700.0143
THR 3710.0172
PRO 3720.0281
ARG 3730.0287
ALA 3740.0158
ALA 3940.0092
LYS 3950.0090
TRP 3960.0082
HIS 3970.0089
LEU 3980.0091
GLY 3990.0093
ILE 4000.0128
ARG 4010.0117
SER 4020.0152
GLN 4030.0213
SER 4040.0151
ARG 4050.0070
PRO 4060.0038
ASN 4070.0078
ASP 4080.0088
ILE 4090.0078
MET 4100.0089
ALA 4110.0113
GLU 4120.0081
VAL 4130.0065
CYS 4140.0062
ARG 4150.0060
ALA 4160.0061
ILE 4170.0036
LYS 4180.0034
GLN 4190.0064
LEU 4200.0059
ASP 4210.0067
TYR 4220.0042
GLU 4230.0046
TRP 4240.0027
LYS 4250.0032
VAL 4260.0047
VAL 4270.0055
ASN 4280.0079
PRO 4290.0095
TYR 4300.0067
TYR 4310.0060
LEU 4320.0056
ARG 4330.0054
VAL 4340.0022
ARG 4350.0045
ARG 4360.0086
LYS 4370.0185
ASN 4380.0167
PRO 4390.0422
VAL 4400.0402
THR 4410.0217
SER 4420.0284
THR 4430.0173
PHE 4440.0145
SER 4450.0057
LYS 4460.0062
MET 4470.0066
SER 4480.0070
LEU 4490.0064
GLN 4500.0062
LEU 4510.0041
TYR 4520.0050
GLN 4530.0109
VAL 4540.0134
ASP 4550.0232
SER 4560.0285
ARG 4570.0251
THR 4580.0193
TYR 4590.0100
LEU 4600.0067
LEU 4610.0071
ASP 4620.0074
PHE 4630.0079
ARG 4640.0081
SER 4650.0082
ILE 4660.0091
ASP 4670.0097
ASP 4680.0104
GLU 4690.0055
ILE 4700.0165
LYS 2030.0184
SER 2040.0138
PRO 2050.0079
PRO 2060.0088
ILE 2070.0099
LEU 2080.0075
PRO 2090.0063
PRO 2100.0063
HIS 2110.0050
LEU 2120.0036
LEU 2130.0041
GLN 2140.0039
VAL 2150.0041
ILE 2160.0033
LEU 2170.0040
ASN 2180.0049
LYS 2190.0056
ASP 2200.0125
THR 2210.0165
ASN 2220.0149
ILE 2230.0145
SER 2240.0109
CYS 2250.0109
ASP 2260.0106
PRO 2270.0126
ALA 2280.0112
LEU 2290.0073
LEU 2300.0061
PRO 2310.0060
GLU 2320.0050
PRO 2330.0028
ASN 2340.0030
HIS 2350.0032
VAL 2360.0029
MET 2370.0029
LEU 2380.0053
ASN 2390.0076
HIS 2400.0074
LEU 2410.0074
TYR 2420.0076
ALA 2430.0076
LEU 2440.0088
SER 2450.0219
ILE 2460.0176
LYS 2470.0259
ASP 2480.0306
SER 2490.0234
VAL 2500.0195
MET 2510.0112
VAL 2520.0094
LEU 2530.0064
SER 2540.0074
ALA 2550.0076
THR 2560.0077
HIS 2570.0108
ARG 2580.0125
TYR 2590.0180
LYS 2600.0246
LYS 2610.0189
LYS 2620.0137
TYR 2630.0091
VAL 2640.0100
THR 2650.0090
THR 2660.0062
LEU 2670.0067
LEU 2680.0057
TYR 2690.0093
LYS 2700.0120
PRO 2710.0189
PRO 5280.0699
GLY 5290.0410
SER 5300.0195
HIS 5310.0057
THR 5320.0068
ILE 5330.0063
GLU 5340.0031
PHE 5350.0043
PHE 5360.0056
GLU 5370.0050
MET 5380.0031
CYS 5390.0047
ALA 5400.0058
ASN 5410.0046
LEU 5420.0044
ILE 5430.0059
LYS 5440.0071
ILE 5450.0084
LEU 5460.0086
ALA 5470.0123
GLN 5480.0140

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.