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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1389
ARG 100.0123
VAL 110.0093
LYS 120.0075
ILE 130.0044
GLY 140.0041
HIS 150.0054
TYR 160.0058
ILE 170.0077
LEU 180.0079
GLY 190.0116
ASP 200.0128
THR 210.0095
LEU 220.0103
GLY 230.0082
VAL 240.0070
GLY 250.0063
THR 260.0080
PHE 270.0067
GLY 280.0056
LYS 290.0035
VAL 300.0052
LYS 310.0064
VAL 320.0076
GLY 330.0062
LYS 340.0078
HIS 350.0073
GLU 360.0078
LEU 370.0089
THR 380.0105
GLY 390.0100
HIS 400.0076
LYS 410.0065
VAL 420.0054
ALA 430.0053
VAL 440.0037
LYS 450.0035
ILE 460.0039
LEU 470.0046
ASN 480.0061
ARG 490.0066
GLN 500.0088
LYS 510.0078
ILE 520.0055
ARG 530.0054
SER 540.0069
LEU 550.0107
ASP 560.0150
VAL 570.0126
VAL 580.0124
GLY 590.0138
LYS 600.0098
ILE 610.0066
ARG 620.0087
ARG 630.0068
GLU 640.0043
ILE 650.0055
GLN 660.0059
ASN 670.0040
LEU 680.0034
LYS 690.0048
LEU 700.0041
PHE 710.0037
ARG 720.0045
HIS 730.0050
PRO 740.0051
HIS 750.0052
ILE 760.0031
ILE 770.0020
LYS 780.0008
LEU 790.0025
TYR 800.0029
GLN 810.0028
VAL 820.0032
ILE 830.0044
SER 840.0065
THR 850.0113
PRO 860.0146
SER 870.0126
ASP 880.0073
ILE 890.0047
PHE 900.0036
MET 910.0026
VAL 920.0029
MET 930.0034
GLU 940.0027
TYR 950.0028
VAL 960.0053
SER 970.0091
GLY 980.0105
GLY 990.0100
GLU 1000.0085
LEU 1010.0070
PHE 1020.0074
ASP 1030.0089
TYR 1040.0075
ILE 1050.0059
CYS 1060.0068
LYS 1070.0081
ASN 1080.0066
GLY 1090.0051
ARG 1100.0031
LEU 1110.0044
ASP 1120.0061
GLU 1130.0058
LYS 1140.0077
GLU 1150.0053
SER 1160.0032
ARG 1170.0034
ARG 1180.0049
LEU 1190.0052
PHE 1200.0044
GLN 1210.0046
GLN 1220.0056
ILE 1230.0058
LEU 1240.0058
SER 1250.0057
GLY 1260.0060
VAL 1270.0056
ASP 1280.0063
TYR 1290.0057
CYS 1300.0052
HIS 1310.0054
ARG 1320.0062
HIS 1330.0043
MET 1340.0037
VAL 1350.0034
VAL 1360.0040
HIS 1370.0039
ARG 1380.0035
ASP 1390.0057
LEU 1400.0058
LYS 1410.0060
PRO 1420.0057
GLU 1430.0073
ASN 1440.0064
VAL 1450.0059
LEU 1460.0067
LEU 1470.0069
ASP 1480.0086
ALA 1490.0096
HIS 1500.0081
MET 1510.0067
ASN 1520.0062
ALA 1530.0058
LYS 1540.0042
ILE 1550.0042
ALA 1560.0048
ASP 1570.0041
PHE 1580.0035
GLY 1590.0032
LEU 1600.0029
SER 1610.0027
ASN 1620.0026
MET 1630.0026
MET 1640.0027
SER 1650.0029
ASP 1660.0031
GLY 1670.0032
GLU 1680.0028
PHE 1690.0012
LEU 1700.0013
ARG 1710.0017
SER 1730.0036
CYS 1740.0034
GLY 1750.0033
SER 1760.0063
PRO 1770.0054
ASN 1780.0045
TYR 1790.0058
ALA 1800.0065
ALA 1810.0071
PRO 1820.0059
GLU 1830.0052
VAL 1840.0052
ILE 1850.0059
SER 1860.0033
GLY 1870.0023
ARG 1880.0030
LEU 1890.0027
TYR 1900.0017
ALA 1910.0031
GLY 1920.0037
PRO 1930.0052
GLU 1940.0059
VAL 1950.0057
ASP 1960.0054
ILE 1970.0069
TRP 1980.0066
SER 1990.0062
SER 2000.0061
GLY 2010.0058
VAL 2020.0054
ILE 2030.0047
LEU 2040.0034
TYR 2050.0036
ALA 2060.0035
LEU 2070.0020
LEU 2080.0027
CYS 2090.0037
GLY 2100.0024
THR 2110.0047
LEU 2120.0031
PRO 2130.0050
PHE 2140.0045
ASP 2150.0035
ASP 2160.0125
ASP 2170.0246
HIS 2180.0186
VAL 2190.0153
PRO 2200.0104
THR 2210.0046
LEU 2220.0030
PHE 2230.0050
LYS 2240.0049
LYS 2250.0056
ILE 2260.0068
CYS 2270.0094
ASP 2280.0105
GLY 2290.0107
ILE 2300.0125
PHE 2310.0107
TYR 2320.0110
THR 2330.0115
PRO 2340.0145
GLN 2350.0167
TYR 2360.0145
LEU 2370.0106
ASN 2380.0099
PRO 2390.0096
SER 2400.0061
VAL 2410.0045
ILE 2420.0070
SER 2430.0066
LEU 2440.0052
LEU 2450.0058
LYS 2460.0077
HIS 2470.0079
MET 2480.0071
LEU 2490.0074
GLN 2500.0086
VAL 2510.0081
ASP 2520.0083
PRO 2530.0083
MET 2540.0080
LYS 2550.0087
ARG 2560.0085
ALA 2570.0080
THR 2580.0087
ILE 2590.0080
LYS 2600.0094
ASP 2610.0078
ILE 2620.0059
ARG 2630.0057
GLU 2640.0048
HIS 2650.0035
GLU 2660.0025
TRP 2670.0028
PHE 2680.0030
LYS 2690.0041
GLN 2700.0052
ASP 2710.0075
LEU 2720.0061
PRO 2730.0073
LYS 2740.0070
TYR 2750.0087
LEU 2760.0076
PHE 2770.0078
PRO 2780.0098
GLU 2790.0056
ASP 2800.0082
ALA 3210.0269
VAL 3220.0356
ALA 3230.0295
TYR 3240.0243
HIS 3250.0259
LEU 3260.0147
ILE 3270.0032
ILE 3280.0103
ASP 3290.0207
ASN 3300.0230
ARG 3310.0200
ARG 3320.0220
ILE 3330.0281
MET 3340.0272
ASN 3350.0209
GLU 3360.0174
ALA 3370.0150
LYS 3380.0145
ASP 3390.0085
PHE 3400.0141
TYR 3410.0149
LEU 3420.0073
ALA 3430.0084
THR 3440.0066
SER 3450.0111
PRO 3460.0224
PRO 3470.0282
ASP 3480.0160
SER 3490.0189
PHE 3500.0260
LEU 3510.0203
ASP 3520.0249
ASP 3530.0142
HIS 3540.0146
HIS 3550.0264
LEU 3560.0129
THR 3570.0116
ARG 3580.0140
PRO 3590.0126
HIS 3600.0121
PRO 3610.0075
GLU 3620.0066
ARG 3630.0039
VAL 3640.0075
PRO 3650.0153
PHE 3660.0137
LEU 3670.0135
VAL 3680.0187
ALA 3690.0152
GLU 3700.0159
THR 3710.0183
PRO 3720.0243
ARG 3730.0307
ALA 3740.0231
ALA 3940.0054
LYS 3950.0042
TRP 3960.0041
HIS 3970.0043
LEU 3980.0041
GLY 3990.0067
ILE 4000.0161
ARG 4010.0194
SER 4020.0267
GLN 4030.0387
SER 4040.0299
ARG 4050.0130
PRO 4060.0048
ASN 4070.0170
ASP 4080.0242
ILE 4090.0167
MET 4100.0179
ALA 4110.0248
GLU 4120.0166
VAL 4130.0121
CYS 4140.0130
ARG 4150.0151
ALA 4160.0139
ILE 4170.0098
LYS 4180.0115
GLN 4190.0158
LEU 4200.0138
ASP 4210.0127
TYR 4220.0091
GLU 4230.0061
TRP 4240.0059
LYS 4250.0082
VAL 4260.0127
VAL 4270.0155
ASN 4280.0195
PRO 4290.0216
TYR 4300.0113
TYR 4310.0096
LEU 4320.0085
ARG 4330.0042
VAL 4340.0022
ARG 4350.0077
ARG 4360.0175
LYS 4370.0340
ASN 4380.0324
PRO 4390.0772
VAL 4400.0749
THR 4410.0410
SER 4420.0517
THR 4430.0313
PHE 4440.0248
SER 4450.0093
LYS 4460.0067
MET 4470.0036
SER 4480.0040
LEU 4490.0043
GLN 4500.0056
LEU 4510.0029
TYR 4520.0092
GLN 4530.0181
VAL 4540.0251
ASP 4550.0427
SER 4560.0512
ARG 4570.0444
THR 4580.0348
TYR 4590.0172
LEU 4600.0093
LEU 4610.0062
ASP 4620.0044
PHE 4630.0039
ARG 4640.0039
SER 4650.0040
ILE 4660.0068
ASP 4670.0092
ASP 4680.0115
GLU 4690.0052
ILE 4700.0148
LYS 2030.0344
SER 2040.0246
PRO 2050.0123
PRO 2060.0133
ILE 2070.0146
LEU 2080.0122
PRO 2090.0032
PRO 2100.0042
HIS 2110.0035
LEU 2120.0022
LEU 2130.0033
GLN 2140.0029
VAL 2150.0018
ILE 2160.0035
LEU 2170.0048
ASN 2180.0061
LYS 2190.0092
ASP 2200.0163
THR 2210.0168
ASN 2220.0142
ILE 2230.0161
SER 2240.0110
CYS 2250.0125
ASP 2260.0147
PRO 2270.0172
ALA 2280.0198
LEU 2290.0158
LEU 2300.0089
PRO 2310.0068
GLU 2320.0034
PRO 2330.0027
ASN 2340.0028
HIS 2350.0030
VAL 2360.0026
MET 2370.0028
LEU 2380.0031
ASN 2390.0030
HIS 2400.0031
LEU 2410.0034
TYR 2420.0040
ALA 2430.0048
LEU 2440.0056
SER 2450.0047
ILE 2460.0029
LYS 2470.0039
ASP 2480.0048
SER 2490.0036
VAL 2500.0033
MET 2510.0029
VAL 2520.0030
LEU 2530.0025
SER 2540.0041
ALA 2550.0035
THR 2560.0034
HIS 2570.0028
ARG 2580.0031
TYR 2590.0042
LYS 2600.0056
LYS 2610.0042
LYS 2620.0051
TYR 2630.0035
VAL 2640.0035
THR 2650.0040
THR 2660.0035
LEU 2670.0037
LEU 2680.0036
TYR 2690.0029
LYS 2700.0021
PRO 2710.0021
PRO 5280.1389
GLY 5290.0769
SER 5300.0309
HIS 5310.0047
THR 5320.0033
ILE 5330.0029
GLU 5340.0029
PHE 5350.0028
PHE 5360.0036
GLU 5370.0059
MET 5380.0056
CYS 5390.0054
ALA 5400.0073
ASN 5410.0066
LEU 5420.0059
ILE 5430.0054
LYS 5440.0110
ILE 5450.0126
LEU 5460.0108
ALA 5470.0130
GLN 5480.0136

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.