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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0680
ARG 100.0252
VAL 110.0216
LYS 120.0159
ILE 130.0128
GLY 140.0132
HIS 150.0090
TYR 160.0083
ILE 170.0119
LEU 180.0140
GLY 190.0208
ASP 200.0209
THR 210.0148
LEU 220.0132
GLY 230.0084
VAL 240.0062
GLY 250.0067
THR 260.0083
PHE 270.0071
GLY 280.0044
LYS 290.0023
VAL 300.0051
LYS 310.0104
VAL 320.0105
GLY 330.0087
LYS 340.0096
HIS 350.0095
GLU 360.0092
LEU 370.0167
THR 380.0213
GLY 390.0168
HIS 400.0109
LYS 410.0081
VAL 420.0063
ALA 430.0068
VAL 440.0051
LYS 450.0038
ILE 460.0020
LEU 470.0033
ASN 480.0096
ARG 490.0142
GLN 500.0170
LYS 510.0108
ILE 520.0021
ARG 530.0061
SER 540.0058
LEU 550.0107
ASP 560.0191
VAL 570.0159
VAL 580.0155
GLY 590.0180
LYS 600.0130
ILE 610.0079
ARG 620.0095
ARG 630.0080
GLU 640.0059
ILE 650.0061
GLN 660.0066
ASN 670.0053
LEU 680.0045
LYS 690.0053
LEU 700.0055
PHE 710.0049
ARG 720.0047
HIS 730.0048
PRO 740.0046
HIS 750.0046
ILE 760.0038
ILE 770.0042
LYS 780.0040
LEU 790.0059
TYR 800.0062
GLN 810.0056
VAL 820.0103
ILE 830.0104
SER 840.0136
THR 850.0226
PRO 860.0310
SER 870.0250
ASP 880.0129
ILE 890.0088
PHE 900.0054
MET 910.0049
VAL 920.0052
MET 930.0057
GLU 940.0053
TYR 950.0052
VAL 960.0064
SER 970.0072
GLY 980.0078
GLY 990.0082
GLU 1000.0078
LEU 1010.0068
PHE 1020.0069
ASP 1030.0080
TYR 1040.0073
ILE 1050.0060
CYS 1060.0060
LYS 1070.0080
ASN 1080.0073
GLY 1090.0052
ARG 1100.0035
LEU 1110.0037
ASP 1120.0031
GLU 1130.0026
LYS 1140.0036
GLU 1150.0039
SER 1160.0034
ARG 1170.0041
ARG 1180.0038
LEU 1190.0051
PHE 1200.0052
GLN 1210.0049
GLN 1220.0051
ILE 1230.0053
LEU 1240.0056
SER 1250.0049
GLY 1260.0054
VAL 1270.0050
ASP 1280.0055
TYR 1290.0057
CYS 1300.0050
HIS 1310.0050
ARG 1320.0058
HIS 1330.0047
MET 1340.0035
VAL 1350.0031
VAL 1360.0049
HIS 1370.0047
ARG 1380.0041
ASP 1390.0066
LEU 1400.0068
LYS 1410.0066
PRO 1420.0066
GLU 1430.0073
ASN 1440.0072
VAL 1450.0065
LEU 1460.0067
LEU 1470.0063
ASP 1480.0073
ALA 1490.0079
HIS 1500.0077
MET 1510.0058
ASN 1520.0057
ALA 1530.0056
LYS 1540.0049
ILE 1550.0053
ALA 1560.0060
ASP 1570.0055
PHE 1580.0054
GLY 1590.0054
LEU 1600.0041
SER 1610.0041
ASN 1620.0042
MET 1630.0027
MET 1640.0019
SER 1650.0028
ASP 1660.0029
GLY 1670.0027
GLU 1680.0030
PHE 1690.0019
LEU 1700.0020
ARG 1710.0021
SER 1730.0047
CYS 1740.0045
GLY 1750.0051
SER 1760.0078
PRO 1770.0066
ASN 1780.0061
TYR 1790.0064
ALA 1800.0072
ALA 1810.0077
PRO 1820.0066
GLU 1830.0061
VAL 1840.0063
ILE 1850.0069
SER 1860.0052
GLY 1870.0040
ARG 1880.0015
LEU 1890.0014
TYR 1900.0023
ALA 1910.0029
GLY 1920.0038
PRO 1930.0050
GLU 1940.0059
VAL 1950.0058
ASP 1960.0056
ILE 1970.0075
TRP 1980.0071
SER 1990.0068
SER 2000.0071
GLY 2010.0067
VAL 2020.0061
ILE 2030.0059
LEU 2040.0054
TYR 2050.0046
ALA 2060.0041
LEU 2070.0039
LEU 2080.0030
CYS 2090.0032
GLY 2100.0031
THR 2110.0036
LEU 2120.0036
PRO 2130.0041
PHE 2140.0038
ASP 2150.0026
ASP 2160.0086
ASP 2170.0179
HIS 2180.0128
VAL 2190.0105
PRO 2200.0060
THR 2210.0024
LEU 2220.0024
PHE 2230.0050
LYS 2240.0047
LYS 2250.0042
ILE 2260.0062
CYS 2270.0080
ASP 2280.0081
GLY 2290.0085
ILE 2300.0087
PHE 2310.0073
TYR 2320.0071
THR 2330.0075
PRO 2340.0078
GLN 2350.0088
TYR 2360.0071
LEU 2370.0056
ASN 2380.0053
PRO 2390.0066
SER 2400.0060
VAL 2410.0058
ILE 2420.0066
SER 2430.0079
LEU 2440.0077
LEU 2450.0069
LYS 2460.0078
HIS 2470.0086
MET 2480.0079
LEU 2490.0075
GLN 2500.0082
VAL 2510.0077
ASP 2520.0077
PRO 2530.0078
MET 2540.0076
LYS 2550.0084
ARG 2560.0084
ALA 2570.0083
THR 2580.0087
ILE 2590.0080
LYS 2600.0091
ASP 2610.0086
ILE 2620.0076
ARG 2630.0069
GLU 2640.0066
HIS 2650.0067
GLU 2660.0056
TRP 2670.0050
PHE 2680.0056
LYS 2690.0057
GLN 2700.0052
ASP 2710.0052
LEU 2720.0057
PRO 2730.0056
LYS 2740.0050
TYR 2750.0056
LEU 2760.0058
PHE 2770.0055
PRO 2780.0083
GLU 2790.0116
ASP 2800.0095
ALA 3210.0547
VAL 3220.0277
ALA 3230.0400
TYR 3240.0347
HIS 3250.0308
LEU 3260.0351
ILE 3270.0319
ILE 3280.0158
ASP 3290.0232
ASN 3300.0234
ARG 3310.0327
ARG 3320.0511
ILE 3330.0550
MET 3340.0471
ASN 3350.0641
GLU 3360.0680
ALA 3370.0484
LYS 3380.0387
ASP 3390.0154
PHE 3400.0103
TYR 3410.0151
LEU 3420.0117
ALA 3430.0078
THR 3440.0025
SER 3450.0045
PRO 3460.0185
PRO 3470.0274
ASP 3480.0277
SER 3490.0253
PHE 3500.0342
LEU 3510.0390
ASP 3520.0312
ASP 3530.0358
HIS 3540.0282
HIS 3550.0347
LEU 3560.0136
THR 3570.0206
ARG 3580.0334
PRO 3590.0254
HIS 3600.0270
PRO 3610.0264
GLU 3620.0189
ARG 3630.0061
VAL 3640.0137
PRO 3650.0194
PHE 3660.0197
LEU 3670.0193
VAL 3680.0273
ALA 3690.0230
GLU 3700.0230
THR 3710.0240
PRO 3720.0361
ARG 3730.0452
ALA 3740.0206
ALA 3940.0043
LYS 3950.0046
TRP 3960.0040
HIS 3970.0047
LEU 3980.0036
GLY 3990.0032
ILE 4000.0074
ARG 4010.0091
SER 4020.0110
GLN 4030.0155
SER 4040.0106
ARG 4050.0030
PRO 4060.0010
ASN 4070.0076
ASP 4080.0098
ILE 4090.0065
MET 4100.0073
ALA 4110.0111
GLU 4120.0085
VAL 4130.0059
CYS 4140.0068
ARG 4150.0090
ALA 4160.0081
ILE 4170.0057
LYS 4180.0074
GLN 4190.0098
LEU 4200.0082
ASP 4210.0063
TYR 4220.0041
GLU 4230.0017
TRP 4240.0032
LYS 4250.0055
VAL 4260.0076
VAL 4270.0089
ASN 4280.0103
PRO 4290.0106
TYR 4300.0055
TYR 4310.0048
LEU 4320.0037
ARG 4330.0026
VAL 4340.0018
ARG 4350.0041
ARG 4360.0091
LYS 4370.0154
ASN 4380.0148
PRO 4390.0347
VAL 4400.0340
THR 4410.0179
SER 4420.0214
THR 4430.0129
PHE 4440.0106
SER 4450.0055
LYS 4460.0040
MET 4470.0024
SER 4480.0016
LEU 4490.0011
GLN 4500.0028
LEU 4510.0016
TYR 4520.0053
GLN 4530.0091
VAL 4540.0120
ASP 4550.0193
SER 4560.0226
ARG 4570.0189
THR 4580.0151
TYR 4590.0078
LEU 4600.0048
LEU 4610.0026
ASP 4620.0020
PHE 4630.0016
ARG 4640.0021
SER 4650.0024
ILE 4660.0037
ASP 4670.0052
ASP 4680.0066
GLU 4690.0049
ILE 4700.0040
LYS 2030.0192
SER 2040.0139
PRO 2050.0069
PRO 2060.0063
ILE 2070.0066
LEU 2080.0056
PRO 2090.0014
PRO 2100.0021
HIS 2110.0025
LEU 2120.0014
LEU 2130.0013
GLN 2140.0007
VAL 2150.0027
ILE 2160.0025
LEU 2170.0023
ASN 2180.0052
LYS 2190.0051
ASP 2200.0072
THR 2210.0120
ASN 2220.0128
ILE 2230.0196
SER 2240.0204
CYS 2250.0208
ASP 2260.0216
PRO 2270.0212
ALA 2280.0208
LEU 2290.0151
LEU 2300.0077
PRO 2310.0071
GLU 2320.0086
PRO 2330.0027
ASN 2340.0016
HIS 2350.0016
VAL 2360.0014
MET 2370.0006
LEU 2380.0017
ASN 2390.0023
HIS 2400.0017
LEU 2410.0014
TYR 2420.0029
ALA 2430.0032
LEU 2440.0036
SER 2450.0062
ILE 2460.0076
LYS 2470.0079
ASP 2480.0144
SER 2490.0125
VAL 2500.0060
MET 2510.0039
VAL 2520.0036
LEU 2530.0037
SER 2540.0020
ALA 2550.0019
THR 2560.0023
HIS 2570.0039
ARG 2580.0078
TYR 2590.0137
LYS 2600.0190
LYS 2610.0181
LYS 2620.0160
TYR 2630.0070
VAL 2640.0061
THR 2650.0041
THR 2660.0028
LEU 2670.0028
LEU 2680.0025
TYR 2690.0031
LYS 2700.0032
PRO 2710.0036
PRO 5280.0675
GLY 5290.0363
SER 5300.0111
HIS 5310.0029
THR 5320.0030
ILE 5330.0029
GLU 5340.0033
PHE 5350.0030
PHE 5360.0031
GLU 5370.0045
MET 5380.0040
CYS 5390.0040
ALA 5400.0057
ASN 5410.0050
LEU 5420.0042
ILE 5430.0051
LYS 5440.0082
ILE 5450.0077
LEU 5460.0063
ALA 5470.0074
GLN 5480.0086

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.