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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0544
ARG 100.0408
VAL 110.0424
LYS 120.0421
ILE 130.0436
GLY 140.0544
HIS 150.0421
TYR 160.0290
ILE 170.0270
LEU 180.0176
GLY 190.0165
ASP 200.0157
THR 210.0189
LEU 220.0247
GLY 230.0235
VAL 240.0217
GLY 250.0204
THR 260.0154
PHE 270.0157
GLY 280.0193
LYS 290.0220
VAL 300.0254
LYS 310.0231
VAL 320.0195
GLY 330.0179
LYS 340.0161
HIS 350.0242
GLU 360.0406
LEU 370.0478
THR 380.0305
GLY 390.0280
HIS 400.0178
LYS 410.0198
VAL 420.0247
ALA 430.0302
VAL 440.0273
LYS 450.0256
ILE 460.0242
LEU 470.0178
ASN 480.0191
ARG 490.0195
GLN 500.0368
LYS 510.0288
ILE 520.0215
ARG 530.0339
SER 540.0439
LEU 550.0392
ASP 560.0418
VAL 570.0260
VAL 580.0287
GLY 590.0248
LYS 600.0151
ILE 610.0125
ARG 620.0172
ARG 630.0092
GLU 640.0065
ILE 650.0117
GLN 660.0082
ASN 670.0038
LEU 680.0089
LYS 690.0117
LEU 700.0091
PHE 710.0070
ARG 720.0085
HIS 730.0044
PRO 740.0055
HIS 750.0063
ILE 760.0116
ILE 770.0156
LYS 780.0169
LEU 790.0307
TYR 800.0306
GLN 810.0294
VAL 820.0419
ILE 830.0400
SER 840.0429
THR 850.0507
PRO 860.0491
SER 870.0379
ASP 880.0262
ILE 890.0294
PHE 900.0343
MET 910.0292
VAL 920.0280
MET 930.0298
GLU 940.0220
TYR 950.0207
VAL 960.0217
SER 970.0181
GLY 980.0140
GLY 990.0044
GLU 1000.0087
LEU 1010.0082
PHE 1020.0096
ASP 1030.0128
TYR 1040.0123
ILE 1050.0108
CYS 1060.0136
LYS 1070.0188
ASN 1080.0198
GLY 1090.0198
ARG 1100.0168
LEU 1110.0143
ASP 1120.0115
GLU 1130.0090
LYS 1140.0091
GLU 1150.0075
SER 1160.0077
ARG 1170.0065
ARG 1180.0061
LEU 1190.0059
PHE 1200.0065
GLN 1210.0061
GLN 1220.0056
ILE 1230.0057
LEU 1240.0063
SER 1250.0060
GLY 1260.0055
VAL 1270.0058
ASP 1280.0067
TYR 1290.0045
CYS 1300.0044
HIS 1310.0069
ARG 1320.0068
HIS 1330.0056
MET 1340.0081
VAL 1350.0056
VAL 1360.0078
HIS 1370.0069
ARG 1380.0080
ASP 1390.0081
LEU 1400.0075
LYS 1410.0076
PRO 1420.0062
GLU 1430.0077
ASN 1440.0061
VAL 1450.0031
LEU 1460.0036
LEU 1470.0060
ASP 1480.0144
ALA 1490.0192
HIS 1500.0142
MET 1510.0059
ASN 1520.0038
ALA 1530.0042
LYS 1540.0084
ILE 1550.0065
ALA 1560.0062
ASP 1570.0065
PHE 1580.0047
GLY 1590.0048
LEU 1600.0064
SER 1610.0061
ASN 1620.0073
MET 1630.0071
MET 1640.0079
SER 1650.0090
ASP 1660.0074
GLY 1670.0061
GLU 1680.0068
PHE 1690.0060
LEU 1700.0071
ARG 1710.0070
SER 1730.0089
CYS 1740.0092
GLY 1750.0091
SER 1760.0106
PRO 1770.0079
ASN 1780.0086
TYR 1790.0091
ALA 1800.0086
ALA 1810.0079
PRO 1820.0057
GLU 1830.0057
VAL 1840.0062
ILE 1850.0042
SER 1860.0042
GLY 1870.0042
ARG 1880.0046
LEU 1890.0055
TYR 1900.0060
ALA 1910.0078
GLY 1920.0070
PRO 1930.0077
GLU 1940.0078
VAL 1950.0078
ASP 1960.0081
ILE 1970.0083
TRP 1980.0080
SER 1990.0092
SER 2000.0102
GLY 2010.0085
VAL 2020.0099
ILE 2030.0121
LEU 2040.0108
TYR 2050.0113
ALA 2060.0130
LEU 2070.0131
LEU 2080.0126
CYS 2090.0163
GLY 2100.0167
THR 2110.0154
LEU 2120.0134
PRO 2130.0120
PHE 2140.0101
ASP 2150.0129
ASP 2160.0126
ASP 2170.0147
HIS 2180.0185
VAL 2190.0115
PRO 2200.0142
THR 2210.0128
LEU 2220.0073
PHE 2230.0024
LYS 2240.0059
LYS 2250.0086
ILE 2260.0059
CYS 2270.0036
ASP 2280.0052
GLY 2290.0066
ILE 2300.0069
PHE 2310.0103
TYR 2320.0150
THR 2330.0159
PRO 2340.0265
GLN 2350.0332
TYR 2360.0219
LEU 2370.0170
ASN 2380.0136
PRO 2390.0129
SER 2400.0079
VAL 2410.0080
ILE 2420.0107
SER 2430.0070
LEU 2440.0046
LEU 2450.0076
LYS 2460.0058
HIS 2470.0038
MET 2480.0063
LEU 2490.0063
GLN 2500.0047
VAL 2510.0047
ASP 2520.0043
PRO 2530.0047
MET 2540.0042
LYS 2550.0037
ARG 2560.0044
ALA 2570.0048
THR 2580.0060
ILE 2590.0072
LYS 2600.0063
ASP 2610.0049
ILE 2620.0056
ARG 2630.0052
GLU 2640.0040
HIS 2650.0030
GLU 2660.0020
TRP 2670.0033
PHE 2680.0046
LYS 2690.0048
GLN 2700.0050
ASP 2710.0075
LEU 2720.0095
PRO 2730.0103
LYS 2740.0108
TYR 2750.0085
LEU 2760.0066
PHE 2770.0070
PRO 2780.0120
GLU 2790.0123
ASP 2800.0131
ALA 3210.0293
VAL 3220.0240
ALA 3230.0270
TYR 3240.0277
HIS 3250.0310
LEU 3260.0200
ILE 3270.0068
ILE 3280.0039
ASP 3290.0190
ASN 3300.0218
ARG 3310.0291
ARG 3320.0391
ILE 3330.0347
MET 3340.0242
ASN 3350.0436
GLU 3360.0472
ALA 3370.0335
LYS 3380.0218
ASP 3390.0166
PHE 3400.0165
TYR 3410.0167
LEU 3420.0063
ALA 3430.0033
THR 3440.0062
SER 3450.0018
PRO 3460.0038
PRO 3470.0063
ASP 3480.0037
SER 3490.0061
PHE 3500.0034
LEU 3510.0030
ASP 3520.0055
ASP 3530.0095
HIS 3540.0081
HIS 3550.0150
LEU 3560.0083
THR 3570.0030
ARG 3580.0074
PRO 3590.0066
HIS 3600.0055
PRO 3610.0028
GLU 3620.0024
ARG 3630.0041
VAL 3640.0054
PRO 3650.0068
PHE 3660.0087
LEU 3670.0107
VAL 3680.0122
ALA 3690.0126
GLU 3700.0112
THR 3710.0115
PRO 3720.0100
ARG 3730.0107
ALA 3740.0255
ALA 3940.0118
LYS 3950.0091
TRP 3960.0064
HIS 3970.0050
LEU 3980.0039
GLY 3990.0044
ILE 4000.0052
ARG 4010.0043
SER 4020.0060
GLN 4030.0160
SER 4040.0158
ARG 4050.0161
PRO 4060.0112
ASN 4070.0111
ASP 4080.0133
ILE 4090.0054
MET 4100.0046
ALA 4110.0071
GLU 4120.0053
VAL 4130.0055
CYS 4140.0065
ARG 4150.0103
ALA 4160.0110
ILE 4170.0093
LYS 4180.0110
GLN 4190.0134
LEU 4200.0118
ASP 4210.0095
TYR 4220.0082
GLU 4230.0077
TRP 4240.0062
LYS 4250.0053
VAL 4260.0051
VAL 4270.0045
ASN 4280.0044
PRO 4290.0047
TYR 4300.0042
TYR 4310.0045
LEU 4320.0047
ARG 4330.0071
VAL 4340.0071
ARG 4350.0070
ARG 4360.0109
LYS 4370.0098
ASN 4380.0080
PRO 4390.0150
VAL 4400.0138
THR 4410.0105
SER 4420.0095
THR 4430.0061
PHE 4440.0069
SER 4450.0073
LYS 4460.0071
MET 4470.0068
SER 4480.0060
LEU 4490.0048
GLN 4500.0045
LEU 4510.0028
TYR 4520.0053
GLN 4530.0079
VAL 4540.0154
ASP 4550.0219
SER 4560.0257
ARG 4570.0230
THR 4580.0168
TYR 4590.0094
LEU 4600.0039
LEU 4610.0029
ASP 4620.0044
PHE 4630.0054
ARG 4640.0048
SER 4650.0045
ILE 4660.0069
ASP 4670.0077
ASP 4680.0087
GLU 4690.0066
ILE 4700.0023
LYS 2030.0050
SER 2040.0051
PRO 2050.0050
PRO 2060.0046
ILE 2070.0047
LEU 2080.0052
PRO 2090.0022
PRO 2100.0026
HIS 2110.0037
LEU 2120.0020
LEU 2130.0029
GLN 2140.0040
VAL 2150.0062
ILE 2160.0065
LEU 2170.0064
ASN 2180.0065
LYS 2190.0069
ASP 2200.0062
THR 2210.0059
ASN 2220.0058
ILE 2230.0070
SER 2240.0065
CYS 2250.0060
ASP 2260.0060
PRO 2270.0057
ALA 2280.0071
LEU 2290.0061
LEU 2300.0051
PRO 2310.0083
GLU 2320.0113
PRO 2330.0099
ASN 2340.0096
HIS 2350.0091
VAL 2360.0059
MET 2370.0057
LEU 2380.0050
ASN 2390.0029
HIS 2400.0038
LEU 2410.0047
TYR 2420.0045
ALA 2430.0061
LEU 2440.0082
SER 2450.0134
ILE 2460.0089
LYS 2470.0083
ASP 2480.0271
SER 2490.0252
VAL 2500.0086
MET 2510.0079
VAL 2520.0079
LEU 2530.0084
SER 2540.0053
ALA 2550.0047
THR 2560.0049
HIS 2570.0039
ARG 2580.0102
TYR 2590.0151
LYS 2600.0285
LYS 2610.0249
LYS 2620.0157
TYR 2630.0089
VAL 2640.0054
THR 2650.0038
THR 2660.0062
LEU 2670.0064
LEU 2680.0064
TYR 2690.0077
LYS 2700.0094
PRO 2710.0108
PRO 5280.0149
GLY 5290.0069
SER 5300.0052
HIS 5310.0063
THR 5320.0062
ILE 5330.0064
GLU 5340.0060
PHE 5350.0057
PHE 5360.0061
GLU 5370.0072
MET 5380.0073
CYS 5390.0081
ALA 5400.0103
ASN 5410.0100
LEU 5420.0099
ILE 5430.0119
LYS 5440.0145
ILE 5450.0140
LEU 5460.0121
ALA 5470.0173
GLN 5480.0225

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.