CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0746
ARG 100.0254
VAL 110.0239
LYS 120.0223
ILE 130.0217
GLY 140.0277
HIS 150.0203
TYR 160.0135
ILE 170.0140
LEU 180.0088
GLY 190.0100
ASP 200.0082
THR 210.0083
LEU 220.0119
GLY 230.0122
VAL 240.0121
GLY 250.0106
THR 260.0092
PHE 270.0092
GLY 280.0119
LYS 290.0124
VAL 300.0132
LYS 310.0108
VAL 320.0092
GLY 330.0083
LYS 340.0087
HIS 350.0097
GLU 360.0188
LEU 370.0189
THR 380.0126
GLY 390.0158
HIS 400.0116
LYS 410.0116
VAL 420.0124
ALA 430.0147
VAL 440.0138
LYS 450.0134
ILE 460.0140
LEU 470.0115
ASN 480.0109
ARG 490.0101
GLN 500.0167
LYS 510.0105
ILE 520.0075
ARG 530.0169
SER 540.0200
LEU 550.0208
ASP 560.0251
VAL 570.0131
VAL 580.0155
GLY 590.0134
LYS 600.0069
ILE 610.0054
ARG 620.0078
ARG 630.0036
GLU 640.0041
ILE 650.0062
GLN 660.0046
ASN 670.0028
LEU 680.0048
LYS 690.0053
LEU 700.0022
PHE 710.0024
ARG 720.0027
HIS 730.0025
PRO 740.0029
HIS 750.0032
ILE 760.0051
ILE 770.0071
LYS 780.0073
LEU 790.0143
TYR 800.0135
GLN 810.0132
VAL 820.0198
ILE 830.0191
SER 840.0202
THR 850.0219
PRO 860.0193
SER 870.0165
ASP 880.0135
ILE 890.0155
PHE 900.0181
MET 910.0146
VAL 920.0133
MET 930.0140
GLU 940.0100
TYR 950.0097
VAL 960.0102
SER 970.0102
GLY 980.0066
GLY 990.0050
GLU 1000.0038
LEU 1010.0030
PHE 1020.0038
ASP 1030.0056
TYR 1040.0049
ILE 1050.0052
CYS 1060.0080
LYS 1070.0079
ASN 1080.0070
GLY 1090.0072
ARG 1100.0077
LEU 1110.0058
ASP 1120.0046
GLU 1130.0040
LYS 1140.0022
GLU 1150.0027
SER 1160.0042
ARG 1170.0037
ARG 1180.0027
LEU 1190.0036
PHE 1200.0043
GLN 1210.0035
GLN 1220.0035
ILE 1230.0037
LEU 1240.0038
SER 1250.0038
GLY 1260.0037
VAL 1270.0023
ASP 1280.0024
TYR 1290.0022
CYS 1300.0011
HIS 1310.0005
ARG 1320.0012
HIS 1330.0040
MET 1340.0043
VAL 1350.0028
VAL 1360.0030
HIS 1370.0026
ARG 1380.0025
ASP 1390.0023
LEU 1400.0031
LYS 1410.0035
PRO 1420.0025
GLU 1430.0033
ASN 1440.0029
VAL 1450.0027
LEU 1460.0033
LEU 1470.0036
ASP 1480.0068
ALA 1490.0080
HIS 1500.0067
MET 1510.0044
ASN 1520.0038
ALA 1530.0036
LYS 1540.0032
ILE 1550.0029
ALA 1560.0030
ASP 1570.0025
PHE 1580.0022
GLY 1590.0021
LEU 1600.0025
SER 1610.0031
ASN 1620.0035
MET 1630.0035
MET 1640.0055
SER 1650.0090
ASP 1660.0098
GLY 1670.0087
GLU 1680.0109
PHE 1690.0054
LEU 1700.0051
ARG 1710.0043
SER 1730.0040
CYS 1740.0043
GLY 1750.0044
SER 1760.0050
PRO 1770.0045
ASN 1780.0048
TYR 1790.0054
ALA 1800.0049
ALA 1810.0046
PRO 1820.0029
GLU 1830.0033
VAL 1840.0037
ILE 1850.0039
SER 1860.0028
GLY 1870.0036
ARG 1880.0031
LEU 1890.0034
TYR 1900.0030
ALA 1910.0050
GLY 1920.0040
PRO 1930.0040
GLU 1940.0038
VAL 1950.0036
ASP 1960.0040
ILE 1970.0052
TRP 1980.0054
SER 1990.0057
SER 2000.0068
GLY 2010.0066
VAL 2020.0073
ILE 2030.0083
LEU 2040.0074
TYR 2050.0081
ALA 2060.0088
LEU 2070.0076
LEU 2080.0074
CYS 2090.0098
GLY 2100.0103
THR 2110.0110
LEU 2120.0082
PRO 2130.0081
PHE 2140.0067
ASP 2150.0045
ASP 2160.0048
ASP 2170.0107
HIS 2180.0099
VAL 2190.0073
PRO 2200.0062
THR 2210.0031
LEU 2220.0010
PHE 2230.0028
LYS 2240.0023
LYS 2250.0041
ILE 2260.0055
CYS 2270.0058
ASP 2280.0062
GLY 2290.0075
ILE 2300.0088
PHE 2310.0095
TYR 2320.0101
THR 2330.0111
PRO 2340.0143
GLN 2350.0151
TYR 2360.0107
LEU 2370.0096
ASN 2380.0079
PRO 2390.0080
SER 2400.0058
VAL 2410.0068
ILE 2420.0083
SER 2430.0070
LEU 2440.0070
LEU 2450.0079
LYS 2460.0077
HIS 2470.0074
MET 2480.0069
LEU 2490.0068
GLN 2500.0063
VAL 2510.0046
ASP 2520.0037
PRO 2530.0044
MET 2540.0033
LYS 2550.0045
ARG 2560.0060
ALA 2570.0066
THR 2580.0064
ILE 2590.0054
LYS 2600.0065
ASP 2610.0061
ILE 2620.0056
ARG 2630.0054
GLU 2640.0049
HIS 2650.0048
GLU 2660.0034
TRP 2670.0039
PHE 2680.0042
LYS 2690.0036
GLN 2700.0023
ASP 2710.0021
LEU 2720.0038
PRO 2730.0051
LYS 2740.0083
TYR 2750.0058
LEU 2760.0055
PHE 2770.0070
PRO 2780.0092
GLU 2790.0119
ASP 2800.0120
ALA 3210.0398
VAL 3220.0509
ALA 3230.0424
TYR 3240.0462
HIS 3250.0516
LEU 3260.0262
ILE 3270.0067
ILE 3280.0123
ASP 3290.0357
ASN 3300.0397
ARG 3310.0409
ARG 3320.0433
ILE 3330.0291
MET 3340.0293
ASN 3350.0405
GLU 3360.0306
ALA 3370.0147
LYS 3380.0156
ASP 3390.0102
PHE 3400.0282
TYR 3410.0378
LEU 3420.0171
ALA 3430.0085
THR 3440.0147
SER 3450.0085
PRO 3460.0088
PRO 3470.0132
ASP 3480.0177
SER 3490.0176
PHE 3500.0104
LEU 3510.0066
ASP 3520.0053
ASP 3530.0259
HIS 3540.0213
HIS 3550.0311
LEU 3560.0306
THR 3570.0058
ARG 3580.0221
PRO 3590.0177
HIS 3600.0155
PRO 3610.0120
GLU 3620.0107
ARG 3630.0155
VAL 3640.0177
PRO 3650.0203
PHE 3660.0280
LEU 3670.0328
VAL 3680.0363
ALA 3690.0410
GLU 3700.0369
THR 3710.0353
PRO 3720.0332
ARG 3730.0309
ALA 3740.0746
ALA 3940.0059
LYS 3950.0051
TRP 3960.0034
HIS 3970.0027
LEU 3980.0043
GLY 3990.0052
ILE 4000.0051
ARG 4010.0039
SER 4020.0016
GLN 4030.0036
SER 4040.0083
ARG 4050.0139
PRO 4060.0103
ASN 4070.0122
ASP 4080.0117
ILE 4090.0066
MET 4100.0067
ALA 4110.0089
GLU 4120.0075
VAL 4130.0041
CYS 4140.0050
ARG 4150.0072
ALA 4160.0047
ILE 4170.0021
LYS 4180.0056
GLN 4190.0082
LEU 4200.0073
ASP 4210.0064
TYR 4220.0035
GLU 4230.0026
TRP 4240.0041
LYS 4250.0081
VAL 4260.0110
VAL 4270.0147
ASN 4280.0156
PRO 4290.0141
TYR 4300.0093
TYR 4310.0095
LEU 4320.0074
ARG 4330.0092
VAL 4340.0063
ARG 4350.0059
ARG 4360.0096
LYS 4370.0096
ASN 4380.0187
PRO 4390.0425
VAL 4400.0500
THR 4410.0353
SER 4420.0257
THR 4430.0124
PHE 4440.0048
SER 4450.0113
LYS 4460.0104
MET 4470.0113
SER 4480.0094
LEU 4490.0073
GLN 4500.0085
LEU 4510.0048
TYR 4520.0065
GLN 4530.0076
VAL 4540.0105
ASP 4550.0124
SER 4560.0147
ARG 4570.0109
THR 4580.0077
TYR 4590.0063
LEU 4600.0052
LEU 4610.0050
ASP 4620.0065
PHE 4630.0087
ARG 4640.0099
SER 4650.0108
ILE 4660.0144
ASP 4670.0164
ASP 4680.0152
GLU 4690.0125
ILE 4700.0044
LYS 2030.0105
SER 2040.0097
PRO 2050.0077
PRO 2060.0055
ILE 2070.0050
LEU 2080.0053
PRO 2090.0040
PRO 2100.0037
HIS 2110.0037
LEU 2120.0051
LEU 2130.0055
GLN 2140.0058
VAL 2150.0059
ILE 2160.0051
LEU 2170.0040
ASN 2180.0069
LYS 2190.0087
ASP 2200.0109
THR 2210.0126
ASN 2220.0145
ILE 2230.0164
SER 2240.0170
CYS 2250.0145
ASP 2260.0123
PRO 2270.0117
ALA 2280.0125
LEU 2290.0124
LEU 2300.0092
PRO 2310.0159
GLU 2320.0223
PRO 2330.0158
ASN 2340.0150
HIS 2350.0136
VAL 2360.0096
MET 2370.0072
LEU 2380.0044
ASN 2390.0048
HIS 2400.0065
LEU 2410.0077
TYR 2420.0042
ALA 2430.0033
LEU 2440.0032
SER 2450.0132
ILE 2460.0099
LYS 2470.0247
ASP 2480.0269
SER 2490.0227
VAL 2500.0207
MET 2510.0082
VAL 2520.0053
LEU 2530.0053
SER 2540.0062
ALA 2550.0050
THR 2560.0016
HIS 2570.0070
ARG 2580.0227
TYR 2590.0406
LYS 2600.0712
LYS 2610.0680
LYS 2620.0529
TYR 2630.0200
VAL 2640.0162
THR 2650.0093
THR 2660.0038
LEU 2670.0032
LEU 2680.0059
TYR 2690.0107
LYS 2700.0147
PRO 2710.0202
PRO 5280.0249
GLY 5290.0212
SER 5300.0198
HIS 5310.0150
THR 5320.0137
ILE 5330.0126
GLU 5340.0132
PHE 5350.0117
PHE 5360.0101
GLU 5370.0118
MET 5380.0114
CYS 5390.0093
ALA 5400.0086
ASN 5410.0075
LEU 5420.0054
ILE 5430.0044
LYS 5440.0069
ILE 5450.0053
LEU 5460.0033
ALA 5470.0046
GLN 5480.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.