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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0692
ARG 100.0692
VAL 110.0631
LYS 120.0455
ILE 130.0421
GLY 140.0400
HIS 150.0190
TYR 160.0179
ILE 170.0300
LEU 180.0362
GLY 190.0405
ASP 200.0289
THR 210.0299
LEU 220.0282
GLY 230.0354
VAL 240.0472
GLY 250.0302
THR 260.0270
PHE 270.0234
GLY 280.0338
LYS 290.0351
VAL 300.0327
LYS 310.0262
VAL 320.0205
GLY 330.0208
LYS 340.0193
HIS 350.0104
GLU 360.0221
LEU 370.0456
THR 380.0575
GLY 390.0434
HIS 400.0144
LYS 410.0063
VAL 420.0130
ALA 430.0227
VAL 440.0243
LYS 450.0244
ILE 460.0243
LEU 470.0111
ASN 480.0218
ARG 490.0401
GLN 500.0574
LYS 510.0352
ILE 520.0156
ARG 530.0482
SER 540.0391
LEU 550.0280
ASP 560.0607
VAL 570.0422
VAL 580.0409
GLY 590.0426
LYS 600.0289
ILE 610.0137
ARG 620.0135
ARG 630.0097
GLU 640.0125
ILE 650.0147
GLN 660.0144
ASN 670.0096
LEU 680.0116
LYS 690.0163
LEU 700.0148
PHE 710.0082
ARG 720.0071
HIS 730.0031
PRO 740.0040
HIS 750.0053
ILE 760.0009
ILE 770.0052
LYS 780.0079
LEU 790.0170
TYR 800.0188
GLN 810.0225
VAL 820.0257
ILE 830.0215
SER 840.0171
THR 850.0221
PRO 860.0538
SER 870.0502
ASP 880.0169
ILE 890.0107
PHE 900.0251
MET 910.0218
VAL 920.0218
MET 930.0205
GLU 940.0126
TYR 950.0111
VAL 960.0101
SER 970.0054
GLY 980.0072
GLY 990.0075
GLU 1000.0133
LEU 1010.0118
PHE 1020.0132
ASP 1030.0175
TYR 1040.0163
ILE 1050.0152
CYS 1060.0180
LYS 1070.0229
ASN 1080.0220
GLY 1090.0209
ARG 1100.0168
LEU 1110.0138
ASP 1120.0114
GLU 1130.0067
LYS 1140.0064
GLU 1150.0085
SER 1160.0088
ARG 1170.0057
ARG 1180.0073
LEU 1190.0098
PHE 1200.0097
GLN 1210.0080
GLN 1220.0092
ILE 1230.0096
LEU 1240.0099
SER 1250.0090
GLY 1260.0070
VAL 1270.0077
ASP 1280.0083
TYR 1290.0054
CYS 1300.0035
HIS 1310.0063
ARG 1320.0067
HIS 1330.0070
MET 1340.0057
VAL 1350.0026
VAL 1360.0041
HIS 1370.0040
ARG 1380.0055
ASP 1390.0088
LEU 1400.0090
LYS 1410.0092
PRO 1420.0091
GLU 1430.0099
ASN 1440.0085
VAL 1450.0072
LEU 1460.0058
LEU 1470.0052
ASP 1480.0042
ALA 1490.0045
HIS 1500.0062
MET 1510.0067
ASN 1520.0066
ALA 1530.0068
LYS 1540.0043
ILE 1550.0045
ALA 1560.0032
ASP 1570.0054
PHE 1580.0067
GLY 1590.0087
LEU 1600.0037
SER 1610.0039
ASN 1620.0040
MET 1630.0015
MET 1640.0026
SER 1650.0040
ASP 1660.0025
GLY 1670.0025
GLU 1680.0022
PHE 1690.0027
LEU 1700.0025
ARG 1710.0030
SER 1730.0074
CYS 1740.0075
GLY 1750.0075
SER 1760.0131
PRO 1770.0110
ASN 1780.0133
TYR 1790.0126
ALA 1800.0125
ALA 1810.0120
PRO 1820.0099
GLU 1830.0090
VAL 1840.0087
ILE 1850.0077
SER 1860.0068
GLY 1870.0064
ARG 1880.0047
LEU 1890.0041
TYR 1900.0054
ALA 1910.0050
GLY 1920.0054
PRO 1930.0086
GLU 1940.0105
VAL 1950.0102
ASP 1960.0101
ILE 1970.0127
TRP 1980.0123
SER 1990.0127
SER 2000.0137
GLY 2010.0122
VAL 2020.0125
ILE 2030.0129
LEU 2040.0106
TYR 2050.0098
ALA 2060.0128
LEU 2070.0120
LEU 2080.0095
CYS 2090.0128
GLY 2100.0155
THR 2110.0144
LEU 2120.0153
PRO 2130.0126
PHE 2140.0126
ASP 2150.0197
ASP 2160.0219
ASP 2170.0285
HIS 2180.0291
VAL 2190.0195
PRO 2200.0175
THR 2210.0165
LEU 2220.0125
PHE 2230.0051
LYS 2240.0063
LYS 2250.0077
ILE 2260.0070
CYS 2270.0049
ASP 2280.0042
GLY 2290.0082
ILE 2300.0078
PHE 2310.0065
TYR 2320.0053
THR 2330.0074
PRO 2340.0218
GLN 2350.0312
TYR 2360.0187
LEU 2370.0125
ASN 2380.0110
PRO 2390.0120
SER 2400.0093
VAL 2410.0033
ILE 2420.0030
SER 2430.0064
LEU 2440.0065
LEU 2450.0068
LYS 2460.0065
HIS 2470.0088
MET 2480.0110
LEU 2490.0104
GLN 2500.0103
VAL 2510.0098
ASP 2520.0098
PRO 2530.0099
MET 2540.0105
LYS 2550.0105
ARG 2560.0109
ALA 2570.0108
THR 2580.0126
ILE 2590.0121
LYS 2600.0150
ASP 2610.0121
ILE 2620.0105
ARG 2630.0109
GLU 2640.0106
HIS 2650.0088
GLU 2660.0098
TRP 2670.0062
PHE 2680.0074
LYS 2690.0103
GLN 2700.0084
ASP 2710.0086
LEU 2720.0096
PRO 2730.0137
LYS 2740.0199
TYR 2750.0179
LEU 2760.0145
PHE 2770.0156
PRO 2780.0188
GLU 2790.0303
ASP 2800.0378
ALA 3210.0525
VAL 3220.0288
ALA 3230.0264
TYR 3240.0294
HIS 3250.0201
LEU 3260.0224
ILE 3270.0257
ILE 3280.0240
ASP 3290.0368
ASN 3300.0249
ARG 3310.0177
ARG 3320.0268
ILE 3330.0274
MET 3340.0145
ASN 3350.0173
GLU 3360.0185
ALA 3370.0147
LYS 3380.0106
ASP 3390.0071
PHE 3400.0081
TYR 3410.0063
LEU 3420.0043
ALA 3430.0029
THR 3440.0038
SER 3450.0033
PRO 3460.0018
PRO 3470.0021
ASP 3480.0030
SER 3490.0028
PHE 3500.0020
LEU 3510.0022
ASP 3520.0019
ASP 3530.0042
HIS 3540.0051
HIS 3550.0072
LEU 3560.0044
THR 3570.0025
ARG 3580.0053
PRO 3590.0038
HIS 3600.0033
PRO 3610.0031
GLU 3620.0029
ARG 3630.0034
VAL 3640.0037
PRO 3650.0041
PHE 3660.0060
LEU 3670.0069
VAL 3680.0077
ALA 3690.0095
GLU 3700.0087
THR 3710.0078
PRO 3720.0073
ARG 3730.0068
ALA 3740.0159
ALA 3940.0036
LYS 3950.0031
TRP 3960.0023
HIS 3970.0023
LEU 3980.0022
GLY 3990.0019
ILE 4000.0020
ARG 4010.0016
SER 4020.0018
GLN 4030.0034
SER 4040.0038
ARG 4050.0033
PRO 4060.0018
ASN 4070.0027
ASP 4080.0034
ILE 4090.0019
MET 4100.0022
ALA 4110.0028
GLU 4120.0011
VAL 4130.0014
CYS 4140.0015
ARG 4150.0003
ALA 4160.0010
ILE 4170.0008
LYS 4180.0005
GLN 4190.0014
LEU 4200.0017
ASP 4210.0014
TYR 4220.0009
GLU 4230.0008
TRP 4240.0013
LYS 4250.0023
VAL 4260.0030
VAL 4270.0043
ASN 4280.0040
PRO 4290.0033
TYR 4300.0021
TYR 4310.0026
LEU 4320.0026
ARG 4330.0026
VAL 4340.0016
ARG 4350.0013
ARG 4360.0021
LYS 4370.0023
ASN 4380.0032
PRO 4390.0048
VAL 4400.0057
THR 4410.0050
SER 4420.0041
THR 4430.0032
PHE 4440.0024
SER 4450.0027
LYS 4460.0024
MET 4470.0027
SER 4480.0027
LEU 4490.0022
GLN 4500.0023
LEU 4510.0016
TYR 4520.0011
GLN 4530.0007
VAL 4540.0018
ASP 4550.0035
SER 4560.0047
ARG 4570.0042
THR 4580.0028
TYR 4590.0013
LEU 4600.0013
LEU 4610.0017
ASP 4620.0020
PHE 4630.0023
ARG 4640.0026
SER 4650.0025
ILE 4660.0034
ASP 4670.0041
ASP 4680.0040
GLU 4690.0036
ILE 4700.0029
LYS 2030.0010
SER 2040.0009
PRO 2050.0008
PRO 2060.0008
ILE 2070.0013
LEU 2080.0018
PRO 2090.0030
PRO 2100.0041
HIS 2110.0038
LEU 2120.0018
LEU 2130.0026
GLN 2140.0032
VAL 2150.0007
ILE 2160.0008
LEU 2170.0007
ASN 2180.0015
LYS 2190.0019
ASP 2200.0028
THR 2210.0032
ASN 2220.0034
ILE 2230.0036
SER 2240.0036
CYS 2250.0031
ASP 2260.0022
PRO 2270.0024
ALA 2280.0022
LEU 2290.0026
LEU 2300.0024
PRO 2310.0033
GLU 2320.0034
PRO 2330.0013
ASN 2340.0016
HIS 2350.0018
VAL 2360.0013
MET 2370.0016
LEU 2380.0017
ASN 2390.0017
HIS 2400.0020
LEU 2410.0019
TYR 2420.0016
ALA 2430.0020
LEU 2440.0025
SER 2450.0055
ILE 2460.0035
LYS 2470.0048
ASP 2480.0052
SER 2490.0036
VAL 2500.0036
MET 2510.0025
VAL 2520.0026
LEU 2530.0022
SER 2540.0022
ALA 2550.0020
THR 2560.0019
HIS 2570.0029
ARG 2580.0031
TYR 2590.0036
LYS 2600.0047
LYS 2610.0040
LYS 2620.0034
TYR 2630.0028
VAL 2640.0026
THR 2650.0024
THR 2660.0026
LEU 2670.0026
LEU 2680.0026
TYR 2690.0030
LYS 2700.0029
PRO 2710.0033
PRO 5280.0137
GLY 5290.0073
SER 5300.0041
HIS 5310.0035
THR 5320.0038
ILE 5330.0039
GLU 5340.0032
PHE 5350.0028
PHE 5360.0028
GLU 5370.0030
MET 5380.0025
CYS 5390.0024
ALA 5400.0029
ASN 5410.0022
LEU 5420.0019
ILE 5430.0025
LYS 5440.0026
ILE 5450.0022
LEU 5460.0024
ALA 5470.0036
GLN 5480.0048

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.