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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1024
ARG 100.0034
VAL 110.0027
LYS 120.0023
ILE 130.0050
GLY 140.0059
HIS 150.0038
TYR 160.0024
ILE 170.0017
LEU 180.0042
GLY 190.0052
ASP 200.0070
THR 210.0073
LEU 220.0080
GLY 230.0082
VAL 240.0092
GLY 250.0066
THR 260.0060
PHE 270.0042
GLY 280.0055
LYS 290.0060
VAL 300.0068
LYS 310.0060
VAL 320.0057
GLY 330.0046
LYS 340.0028
HIS 350.0014
GLU 360.0037
LEU 370.0070
THR 380.0044
GLY 390.0032
HIS 400.0027
LYS 410.0042
VAL 420.0052
ALA 430.0062
VAL 440.0060
LYS 450.0060
ILE 460.0045
LEU 470.0029
ASN 480.0014
ARG 490.0047
GLN 500.0060
LYS 510.0045
ILE 520.0023
ARG 530.0096
SER 540.0129
LEU 550.0059
ASP 560.0026
VAL 570.0033
VAL 580.0039
GLY 590.0062
LYS 600.0055
ILE 610.0047
ARG 620.0046
ARG 630.0045
GLU 640.0045
ILE 650.0041
GLN 660.0044
ASN 670.0032
LEU 680.0029
LYS 690.0032
LEU 700.0029
PHE 710.0013
ARG 720.0013
HIS 730.0025
PRO 740.0036
HIS 750.0037
ILE 760.0025
ILE 770.0028
LYS 780.0018
LEU 790.0048
TYR 800.0047
GLN 810.0050
VAL 820.0067
ILE 830.0058
SER 840.0045
THR 850.0053
PRO 860.0064
SER 870.0041
ASP 880.0022
ILE 890.0041
PHE 900.0054
MET 910.0060
VAL 920.0057
MET 930.0058
GLU 940.0034
TYR 950.0035
VAL 960.0044
SER 970.0069
GLY 980.0060
GLY 990.0059
GLU 1000.0050
LEU 1010.0038
PHE 1020.0045
ASP 1030.0053
TYR 1040.0038
ILE 1050.0044
CYS 1060.0063
LYS 1070.0047
ASN 1080.0036
GLY 1090.0066
ARG 1100.0064
LEU 1110.0041
ASP 1120.0053
GLU 1130.0041
LYS 1140.0038
GLU 1150.0017
SER 1160.0024
ARG 1170.0018
ARG 1180.0024
LEU 1190.0033
PHE 1200.0036
GLN 1210.0038
GLN 1220.0042
ILE 1230.0044
LEU 1240.0041
SER 1250.0038
GLY 1260.0032
VAL 1270.0022
ASP 1280.0022
TYR 1290.0012
CYS 1300.0017
HIS 1310.0021
ARG 1320.0014
HIS 1330.0046
MET 1340.0068
VAL 1350.0044
VAL 1360.0022
HIS 1370.0014
ARG 1380.0017
ASP 1390.0017
LEU 1400.0022
LYS 1410.0032
PRO 1420.0033
GLU 1430.0037
ASN 1440.0037
VAL 1450.0042
LEU 1460.0045
LEU 1470.0046
ASP 1480.0057
ALA 1490.0075
HIS 1500.0069
MET 1510.0051
ASN 1520.0047
ALA 1530.0044
LYS 1540.0034
ILE 1550.0032
ALA 1560.0030
ASP 1570.0024
PHE 1580.0025
GLY 1590.0032
LEU 1600.0024
SER 1610.0026
ASN 1620.0034
MET 1630.0053
MET 1640.0070
SER 1650.0097
ASP 1660.0123
GLY 1670.0094
GLU 1680.0105
PHE 1690.0048
LEU 1700.0035
ARG 1710.0031
SER 1730.0016
CYS 1740.0012
GLY 1750.0010
SER 1760.0030
PRO 1770.0031
ASN 1780.0032
TYR 1790.0037
ALA 1800.0033
ALA 1810.0028
PRO 1820.0020
GLU 1830.0023
VAL 1840.0016
ILE 1850.0031
SER 1860.0032
GLY 1870.0027
ARG 1880.0029
LEU 1890.0022
TYR 1900.0028
ALA 1910.0059
GLY 1920.0034
PRO 1930.0020
GLU 1940.0020
VAL 1950.0017
ASP 1960.0021
ILE 1970.0037
TRP 1980.0040
SER 1990.0039
SER 2000.0050
GLY 2010.0049
VAL 2020.0053
ILE 2030.0060
LEU 2040.0045
TYR 2050.0058
ALA 2060.0068
LEU 2070.0047
LEU 2080.0049
CYS 2090.0076
GLY 2100.0084
THR 2110.0094
LEU 2120.0070
PRO 2130.0075
PHE 2140.0067
ASP 2150.0056
ASP 2160.0068
ASP 2170.0128
HIS 2180.0104
VAL 2190.0095
PRO 2200.0092
THR 2210.0033
LEU 2220.0027
PHE 2230.0042
LYS 2240.0057
LYS 2250.0055
ILE 2260.0062
CYS 2270.0079
ASP 2280.0090
GLY 2290.0104
ILE 2300.0131
PHE 2310.0118
TYR 2320.0115
THR 2330.0117
PRO 2340.0161
GLN 2350.0179
TYR 2360.0139
LEU 2370.0103
ASN 2380.0085
PRO 2390.0064
SER 2400.0036
VAL 2410.0034
ILE 2420.0052
SER 2430.0035
LEU 2440.0039
LEU 2450.0053
LYS 2460.0062
HIS 2470.0060
MET 2480.0054
LEU 2490.0060
GLN 2500.0064
VAL 2510.0048
ASP 2520.0045
PRO 2530.0050
MET 2540.0046
LYS 2550.0054
ARG 2560.0061
ALA 2570.0059
THR 2580.0060
ILE 2590.0048
LYS 2600.0072
ASP 2610.0057
ILE 2620.0041
ARG 2630.0046
GLU 2640.0057
HIS 2650.0042
GLU 2660.0039
TRP 2670.0025
PHE 2680.0030
LYS 2690.0042
GLN 2700.0042
ASP 2710.0042
LEU 2720.0048
PRO 2730.0045
LYS 2740.0038
TYR 2750.0045
LEU 2760.0044
PHE 2770.0040
PRO 2780.0043
GLU 2790.0056
ASP 2800.0055
ALA 3210.0525
VAL 3220.0791
ALA 3230.0500
TYR 3240.0417
HIS 3250.0537
LEU 3260.0371
ILE 3270.0209
ILE 3280.0240
ASP 3290.0573
ASN 3300.0569
ARG 3310.0332
ARG 3320.0257
ILE 3330.0310
MET 3340.0287
ASN 3350.0140
GLU 3360.0096
ALA 3370.0086
LYS 3380.0098
ASP 3390.0076
PHE 3400.0074
TYR 3410.0084
LEU 3420.0068
ALA 3430.0079
THR 3440.0076
SER 3450.0109
PRO 3460.0163
PRO 3470.0195
ASP 3480.0160
SER 3490.0153
PHE 3500.0067
LEU 3510.0089
ASP 3520.0125
ASP 3530.0085
HIS 3540.0184
HIS 3550.0227
LEU 3560.0146
THR 3570.0131
ARG 3580.0181
PRO 3590.0202
HIS 3600.0204
PRO 3610.0193
GLU 3620.0210
ARG 3630.0163
VAL 3640.0157
PRO 3650.0212
PHE 3660.0327
LEU 3670.0365
VAL 3680.0423
ALA 3690.0538
GLU 3700.0508
THR 3710.0467
PRO 3720.0422
ARG 3730.0397
ALA 3740.1024
ALA 3940.0124
LYS 3950.0084
TRP 3960.0051
HIS 3970.0021
LEU 3980.0033
GLY 3990.0034
ILE 4000.0036
ARG 4010.0031
SER 4020.0079
GLN 4030.0180
SER 4040.0193
ARG 4050.0183
PRO 4060.0106
ASN 4070.0117
ASP 4080.0155
ILE 4090.0065
MET 4100.0068
ALA 4110.0105
GLU 4120.0086
VAL 4130.0077
CYS 4140.0091
ARG 4150.0129
ALA 4160.0127
ILE 4170.0100
LYS 4180.0121
GLN 4190.0143
LEU 4200.0116
ASP 4210.0088
TYR 4220.0077
GLU 4230.0082
TRP 4240.0067
LYS 4250.0060
VAL 4260.0060
VAL 4270.0052
ASN 4280.0054
PRO 4290.0058
TYR 4300.0041
TYR 4310.0050
LEU 4320.0054
ARG 4330.0071
VAL 4340.0073
ARG 4350.0069
ARG 4360.0114
LYS 4370.0106
ASN 4380.0094
PRO 4390.0189
VAL 4400.0183
THR 4410.0152
SER 4420.0135
THR 4430.0082
PHE 4440.0067
SER 4450.0065
LYS 4460.0065
MET 4470.0063
SER 4480.0062
LEU 4490.0054
GLN 4500.0050
LEU 4510.0023
TYR 4520.0035
GLN 4530.0058
VAL 4540.0147
ASP 4550.0229
SER 4560.0287
ARG 4570.0255
THR 4580.0175
TYR 4590.0083
LEU 4600.0024
LEU 4610.0026
ASP 4620.0043
PHE 4630.0050
ARG 4640.0046
SER 4650.0043
ILE 4660.0058
ASP 4670.0056
ASP 4680.0064
GLU 4690.0053
ILE 4700.0018
LYS 2030.0063
SER 2040.0041
PRO 2050.0036
PRO 2060.0044
ILE 2070.0041
LEU 2080.0037
PRO 2090.0044
PRO 2100.0061
HIS 2110.0067
LEU 2120.0073
LEU 2130.0085
GLN 2140.0108
VAL 2150.0098
ILE 2160.0100
LEU 2170.0113
ASN 2180.0162
LYS 2190.0178
ASP 2200.0229
THR 2210.0187
ASN 2220.0157
ILE 2230.0217
SER 2240.0217
CYS 2250.0221
ASP 2260.0257
PRO 2270.0277
ALA 2280.0251
LEU 2290.0156
LEU 2300.0113
PRO 2310.0148
GLU 2320.0191
PRO 2330.0206
ASN 2340.0195
HIS 2350.0181
VAL 2360.0117
MET 2370.0095
LEU 2380.0069
ASN 2390.0023
HIS 2400.0037
LEU 2410.0047
TYR 2420.0040
ALA 2430.0057
LEU 2440.0076
SER 2450.0182
ILE 2460.0116
LYS 2470.0202
ASP 2480.0385
SER 2490.0349
VAL 2500.0173
MET 2510.0108
VAL 2520.0085
LEU 2530.0084
SER 2540.0059
ALA 2550.0040
THR 2560.0028
HIS 2570.0127
ARG 2580.0303
TYR 2590.0506
LYS 2600.0910
LYS 2610.0702
LYS 2620.0339
TYR 2630.0177
VAL 2640.0108
THR 2650.0070
THR 2660.0073
LEU 2670.0059
LEU 2680.0065
TYR 2690.0106
LYS 2700.0158
PRO 2710.0230
PRO 5280.0135
GLY 5290.0073
SER 5300.0073
HIS 5310.0051
THR 5320.0039
ILE 5330.0044
GLU 5340.0052
PHE 5350.0045
PHE 5360.0044
GLU 5370.0068
MET 5380.0066
CYS 5390.0074
ALA 5400.0102
ASN 5410.0097
LEU 5420.0099
ILE 5430.0121
LYS 5440.0152
ILE 5450.0149
LEU 5460.0130
ALA 5470.0171
GLN 5480.0218

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.