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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1359
ARG 100.0079
VAL 110.0068
LYS 120.0057
ILE 130.0047
GLY 140.0043
HIS 150.0045
TYR 160.0046
ILE 170.0054
LEU 180.0061
GLY 190.0075
ASP 200.0086
THR 210.0087
LEU 220.0089
GLY 230.0085
VAL 240.0095
GLY 250.0060
THR 260.0065
PHE 270.0035
GLY 280.0046
LYS 290.0057
VAL 300.0066
LYS 310.0062
VAL 320.0055
GLY 330.0047
LYS 340.0047
HIS 350.0045
GLU 360.0047
LEU 370.0046
THR 380.0042
GLY 390.0041
HIS 400.0033
LYS 410.0033
VAL 420.0035
ALA 430.0046
VAL 440.0043
LYS 450.0045
ILE 460.0036
LEU 470.0018
ASN 480.0024
ARG 490.0049
GLN 500.0087
LYS 510.0082
ILE 520.0057
ARG 530.0129
SER 540.0154
LEU 550.0084
ASP 560.0086
VAL 570.0060
VAL 580.0067
GLY 590.0076
LYS 600.0050
ILE 610.0036
ARG 620.0038
ARG 630.0041
GLU 640.0039
ILE 650.0039
GLN 660.0037
ASN 670.0031
LEU 680.0030
LYS 690.0032
LEU 700.0032
PHE 710.0024
ARG 720.0022
HIS 730.0030
PRO 740.0035
HIS 750.0043
ILE 760.0021
ILE 770.0014
LYS 780.0014
LEU 790.0024
TYR 800.0023
GLN 810.0032
VAL 820.0043
ILE 830.0048
SER 840.0050
THR 850.0045
PRO 860.0018
SER 870.0028
ASP 880.0025
ILE 890.0034
PHE 900.0049
MET 910.0039
VAL 920.0034
MET 930.0030
GLU 940.0013
TYR 950.0014
VAL 960.0017
SER 970.0072
GLY 980.0074
GLY 990.0060
GLU 1000.0056
LEU 1010.0052
PHE 1020.0042
ASP 1030.0080
TYR 1040.0076
ILE 1050.0060
CYS 1060.0130
LYS 1070.0151
ASN 1080.0123
GLY 1090.0065
ARG 1100.0053
LEU 1110.0033
ASP 1120.0032
GLU 1130.0043
LYS 1140.0048
GLU 1150.0035
SER 1160.0030
ARG 1170.0041
ARG 1180.0046
LEU 1190.0047
PHE 1200.0046
GLN 1210.0044
GLN 1220.0043
ILE 1230.0047
LEU 1240.0044
SER 1250.0027
GLY 1260.0039
VAL 1270.0046
ASP 1280.0035
TYR 1290.0028
CYS 1300.0034
HIS 1310.0036
ARG 1320.0022
HIS 1330.0024
MET 1340.0033
VAL 1350.0019
VAL 1360.0035
HIS 1370.0035
ARG 1380.0039
ASP 1390.0037
LEU 1400.0038
LYS 1410.0037
PRO 1420.0033
GLU 1430.0033
ASN 1440.0035
VAL 1450.0030
LEU 1460.0040
LEU 1470.0055
ASP 1480.0073
ALA 1490.0126
HIS 1500.0128
MET 1510.0066
ASN 1520.0059
ALA 1530.0038
LYS 1540.0033
ILE 1550.0030
ALA 1560.0029
ASP 1570.0023
PHE 1580.0032
GLY 1590.0037
LEU 1600.0039
SER 1610.0037
ASN 1620.0037
MET 1630.0040
MET 1640.0050
SER 1650.0094
ASP 1660.0123
GLY 1670.0089
GLU 1680.0068
PHE 1690.0040
LEU 1700.0056
ARG 1710.0068
SER 1730.0063
CYS 1740.0054
GLY 1750.0040
SER 1760.0045
PRO 1770.0034
ASN 1780.0039
TYR 1790.0043
ALA 1800.0050
ALA 1810.0052
PRO 1820.0060
GLU 1830.0060
VAL 1840.0062
ILE 1850.0063
SER 1860.0077
GLY 1870.0088
ARG 1880.0077
LEU 1890.0057
TYR 1900.0038
ALA 1910.0029
GLY 1920.0026
PRO 1930.0041
GLU 1940.0047
VAL 1950.0048
ASP 1960.0047
ILE 1970.0052
TRP 1980.0050
SER 1990.0051
SER 2000.0053
GLY 2010.0044
VAL 2020.0041
ILE 2030.0043
LEU 2040.0033
TYR 2050.0030
ALA 2060.0041
LEU 2070.0034
LEU 2080.0030
CYS 2090.0053
GLY 2100.0070
THR 2110.0073
LEU 2120.0041
PRO 2130.0027
PHE 2140.0027
ASP 2150.0039
ASP 2160.0060
ASP 2170.0092
HIS 2180.0099
VAL 2190.0056
PRO 2200.0068
THR 2210.0063
LEU 2220.0028
PHE 2230.0033
LYS 2240.0040
LYS 2250.0021
ILE 2260.0032
CYS 2270.0042
ASP 2280.0039
GLY 2290.0051
ILE 2300.0047
PHE 2310.0052
TYR 2320.0068
THR 2330.0080
PRO 2340.0149
GLN 2350.0198
TYR 2360.0123
LEU 2370.0098
ASN 2380.0102
PRO 2390.0093
SER 2400.0080
VAL 2410.0050
ILE 2420.0052
SER 2430.0052
LEU 2440.0043
LEU 2450.0038
LYS 2460.0038
HIS 2470.0041
MET 2480.0047
LEU 2490.0048
GLN 2500.0050
VAL 2510.0056
ASP 2520.0053
PRO 2530.0046
MET 2540.0046
LYS 2550.0048
ARG 2560.0045
ALA 2570.0044
THR 2580.0053
ILE 2590.0048
LYS 2600.0054
ASP 2610.0048
ILE 2620.0040
ARG 2630.0053
GLU 2640.0047
HIS 2650.0035
GLU 2660.0059
TRP 2670.0050
PHE 2680.0047
LYS 2690.0053
GLN 2700.0047
ASP 2710.0049
LEU 2720.0057
PRO 2730.0074
LYS 2740.0140
TYR 2750.0121
LEU 2760.0067
PHE 2770.0073
PRO 2780.0144
GLU 2790.0338
ASP 2800.0432
ALA 3210.1359
VAL 3220.1121
ALA 3230.0601
TYR 3240.0534
HIS 3250.0435
LEU 3260.0785
ILE 3270.0549
ILE 3280.0430
ASP 3290.1019
ASN 3300.0556
ARG 3310.0158
ARG 3320.0466
ILE 3330.0276
MET 3340.0290
ASN 3350.0391
GLU 3360.0335
ALA 3370.0492
LYS 3380.0411
ASP 3390.0473
PHE 3400.0457
TYR 3410.0295
LEU 3420.0178
ALA 3430.0084
THR 3440.0143
SER 3450.0120
PRO 3460.0069
PRO 3470.0058
ASP 3480.0102
SER 3490.0068
PHE 3500.0138
LEU 3510.0111
ASP 3520.0173
ASP 3530.0156
HIS 3540.0127
HIS 3550.0151
LEU 3560.0128
THR 3570.0140
ARG 3580.0263
PRO 3590.0132
HIS 3600.0104
PRO 3610.0119
GLU 3620.0083
ARG 3630.0096
VAL 3640.0105
PRO 3650.0097
PHE 3660.0156
LEU 3670.0175
VAL 3680.0197
ALA 3690.0315
GLU 3700.0301
THR 3710.0230
PRO 3720.0234
ARG 3730.0188
ALA 3740.0390
ALA 3940.0105
LYS 3950.0085
TRP 3960.0061
HIS 3970.0031
LEU 3980.0015
GLY 3990.0014
ILE 4000.0027
ARG 4010.0020
SER 4020.0041
GLN 4030.0082
SER 4040.0069
ARG 4050.0058
PRO 4060.0061
ASN 4070.0098
ASP 4080.0115
ILE 4090.0088
MET 4100.0088
ALA 4110.0104
GLU 4120.0092
VAL 4130.0081
CYS 4140.0054
ARG 4150.0051
ALA 4160.0068
ILE 4170.0034
LYS 4180.0023
GLN 4190.0065
LEU 4200.0071
ASP 4210.0056
TYR 4220.0047
GLU 4230.0057
TRP 4240.0025
LYS 4250.0029
VAL 4260.0037
VAL 4270.0045
ASN 4280.0039
PRO 4290.0061
TYR 4300.0044
TYR 4310.0038
LEU 4320.0049
ARG 4330.0044
VAL 4340.0031
ARG 4350.0032
ARG 4360.0085
LYS 4370.0123
ASN 4380.0140
PRO 4390.0280
VAL 4400.0298
THR 4410.0298
SER 4420.0269
THR 4430.0187
PHE 4440.0100
SER 4450.0031
LYS 4460.0022
MET 4470.0039
SER 4480.0050
LEU 4490.0047
GLN 4500.0039
LEU 4510.0045
TYR 4520.0036
GLN 4530.0054
VAL 4540.0079
ASP 4550.0120
SER 4560.0140
ARG 4570.0104
THR 4580.0077
TYR 4590.0033
LEU 4600.0017
LEU 4610.0032
ASP 4620.0035
PHE 4630.0044
ARG 4640.0049
SER 4650.0052
ILE 4660.0043
ASP 4670.0039
ASP 4680.0030
GLU 4690.0031
ILE 4700.0010
LYS 2030.0153
SER 2040.0107
PRO 2050.0063
PRO 2060.0077
ILE 2070.0075
LEU 2080.0053
PRO 2090.0035
PRO 2100.0049
HIS 2110.0035
LEU 2120.0035
LEU 2130.0063
GLN 2140.0087
VAL 2150.0089
ILE 2160.0096
LEU 2170.0096
ASN 2180.0086
LYS 2190.0082
ASP 2200.0072
THR 2210.0043
ASN 2220.0058
ILE 2230.0062
SER 2240.0108
CYS 2250.0096
ASP 2260.0085
PRO 2270.0037
ALA 2280.0159
LEU 2290.0149
LEU 2300.0079
PRO 2310.0112
GLU 2320.0139
PRO 2330.0153
ASN 2340.0132
HIS 2350.0123
VAL 2360.0075
MET 2370.0070
LEU 2380.0094
ASN 2390.0064
HIS 2400.0045
LEU 2410.0035
TYR 2420.0030
ALA 2430.0029
LEU 2440.0054
SER 2450.0095
ILE 2460.0047
LYS 2470.0090
ASP 2480.0110
SER 2490.0114
VAL 2500.0077
MET 2510.0035
VAL 2520.0040
LEU 2530.0028
SER 2540.0035
ALA 2550.0041
THR 2560.0072
HIS 2570.0110
ARG 2580.0190
TYR 2590.0224
LYS 2600.0546
LYS 2610.0579
LYS 2620.0322
TYR 2630.0183
VAL 2640.0130
THR 2650.0109
THR 2660.0052
LEU 2670.0050
LEU 2680.0042
TYR 2690.0056
LYS 2700.0052
PRO 2710.0064
PRO 5280.0561
GLY 5290.0301
SER 5300.0180
HIS 5310.0028
THR 5320.0037
ILE 5330.0044
GLU 5340.0028
PHE 5350.0012
PHE 5360.0028
GLU 5370.0028
MET 5380.0024
CYS 5390.0026
ALA 5400.0062
ASN 5410.0073
LEU 5420.0056
ILE 5430.0085
LYS 5440.0143
ILE 5450.0152
LEU 5460.0153
ALA 5470.0243
GLN 5480.0354

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.