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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0608
ARG 100.0179
VAL 110.0144
LYS 120.0109
ILE 130.0106
GLY 140.0117
HIS 150.0077
TYR 160.0065
ILE 170.0071
LEU 180.0069
GLY 190.0120
ASP 200.0144
THR 210.0122
LEU 220.0141
GLY 230.0137
VAL 240.0157
GLY 250.0096
THR 260.0154
PHE 270.0096
GLY 280.0108
LYS 290.0077
VAL 300.0079
LYS 310.0072
VAL 320.0075
GLY 330.0059
LYS 340.0064
HIS 350.0112
GLU 360.0105
LEU 370.0218
THR 380.0248
GLY 390.0156
HIS 400.0102
LYS 410.0077
VAL 420.0084
ALA 430.0068
VAL 440.0057
LYS 450.0086
ILE 460.0083
LEU 470.0114
ASN 480.0133
ARG 490.0077
GLN 500.0125
LYS 510.0187
ILE 520.0138
ARG 530.0321
SER 540.0461
LEU 550.0324
ASP 560.0226
VAL 570.0139
VAL 580.0148
GLY 590.0182
LYS 600.0145
ILE 610.0124
ARG 620.0137
ARG 630.0152
GLU 640.0124
ILE 650.0114
GLN 660.0133
ASN 670.0112
LEU 680.0081
LYS 690.0104
LEU 700.0136
PHE 710.0096
ARG 720.0099
HIS 730.0096
PRO 740.0089
HIS 750.0054
ILE 760.0028
ILE 770.0018
LYS 780.0032
LEU 790.0019
TYR 800.0022
GLN 810.0040
VAL 820.0058
ILE 830.0071
SER 840.0106
THR 850.0189
PRO 860.0208
SER 870.0184
ASP 880.0139
ILE 890.0102
PHE 900.0080
MET 910.0061
VAL 920.0033
MET 930.0044
GLU 940.0062
TYR 950.0089
VAL 960.0114
SER 970.0210
GLY 980.0222
GLY 990.0186
GLU 1000.0114
LEU 1010.0092
PHE 1020.0095
ASP 1030.0105
TYR 1040.0073
ILE 1050.0064
CYS 1060.0102
LYS 1070.0058
ASN 1080.0032
GLY 1090.0142
ARG 1100.0119
LEU 1110.0107
ASP 1120.0143
GLU 1130.0127
LYS 1140.0143
GLU 1150.0073
SER 1160.0042
ARG 1170.0052
ARG 1180.0038
LEU 1190.0034
PHE 1200.0034
GLN 1210.0029
GLN 1220.0019
ILE 1230.0021
LEU 1240.0019
SER 1250.0030
GLY 1260.0060
VAL 1270.0043
ASP 1280.0061
TYR 1290.0079
CYS 1300.0071
HIS 1310.0088
ARG 1320.0111
HIS 1330.0101
MET 1340.0104
VAL 1350.0091
VAL 1360.0068
HIS 1370.0065
ARG 1380.0084
ASP 1390.0074
LEU 1400.0061
LYS 1410.0081
PRO 1420.0079
GLU 1430.0084
ASN 1440.0070
VAL 1450.0076
LEU 1460.0099
LEU 1470.0122
ASP 1480.0201
ALA 1490.0352
HIS 1500.0317
MET 1510.0149
ASN 1520.0108
ALA 1530.0058
LYS 1540.0049
ILE 1550.0023
ALA 1560.0027
ASP 1570.0067
PHE 1580.0084
GLY 1590.0112
LEU 1600.0112
SER 1610.0104
ASN 1620.0118
MET 1630.0120
MET 1640.0096
SER 1650.0111
ASP 1660.0084
GLY 1670.0061
GLU 1680.0074
PHE 1690.0050
LEU 1700.0061
ARG 1710.0070
SER 1730.0061
CYS 1740.0070
GLY 1750.0061
SER 1760.0084
PRO 1770.0074
ASN 1780.0066
TYR 1790.0059
ALA 1800.0053
ALA 1810.0048
PRO 1820.0057
GLU 1830.0040
VAL 1840.0044
ILE 1850.0024
SER 1860.0024
GLY 1870.0030
ARG 1880.0051
LEU 1890.0044
TYR 1900.0039
ALA 1910.0038
GLY 1920.0047
PRO 1930.0049
GLU 1940.0052
VAL 1950.0063
ASP 1960.0052
ILE 1970.0066
TRP 1980.0068
SER 1990.0068
SER 2000.0063
GLY 2010.0064
VAL 2020.0068
ILE 2030.0045
LEU 2040.0032
TYR 2050.0064
ALA 2060.0064
LEU 2070.0044
LEU 2080.0075
CYS 2090.0107
GLY 2100.0117
THR 2110.0128
LEU 2120.0121
PRO 2130.0127
PHE 2140.0109
ASP 2150.0108
ASP 2160.0098
ASP 2170.0223
HIS 2180.0229
VAL 2190.0246
PRO 2200.0278
THR 2210.0143
LEU 2220.0059
PHE 2230.0085
LYS 2240.0149
LYS 2250.0116
ILE 2260.0095
CYS 2270.0143
ASP 2280.0175
GLY 2290.0215
ILE 2300.0276
PHE 2310.0247
TYR 2320.0270
THR 2330.0233
PRO 2340.0353
GLN 2350.0424
TYR 2360.0352
LEU 2370.0241
ASN 2380.0217
PRO 2390.0123
SER 2400.0134
VAL 2410.0066
ILE 2420.0042
SER 2430.0053
LEU 2440.0057
LEU 2450.0058
LYS 2460.0083
HIS 2470.0091
MET 2480.0075
LEU 2490.0091
GLN 2500.0108
VAL 2510.0091
ASP 2520.0102
PRO 2530.0094
MET 2540.0102
LYS 2550.0119
ARG 2560.0095
ALA 2570.0107
THR 2580.0110
ILE 2590.0076
LYS 2600.0145
ASP 2610.0141
ILE 2620.0099
ARG 2630.0109
GLU 2640.0167
HIS 2650.0146
GLU 2660.0173
TRP 2670.0125
PHE 2680.0106
LYS 2690.0121
GLN 2700.0166
ASP 2710.0170
LEU 2720.0174
PRO 2730.0173
LYS 2740.0264
TYR 2750.0243
LEU 2760.0142
PHE 2770.0181
PRO 2780.0437
GLU 2790.0516
ASP 2800.0579
ALA 3210.0222
VAL 3220.0608
ALA 3230.0598
TYR 3240.0320
HIS 3250.0382
LEU 3260.0362
ILE 3270.0246
ILE 3280.0248
ASP 3290.0205
ASN 3300.0481
ARG 3310.0491
ARG 3320.0191
ILE 3330.0188
MET 3340.0409
ASN 3350.0516
GLU 3360.0431
ALA 3370.0382
LYS 3380.0256
ASP 3390.0317
PHE 3400.0383
TYR 3410.0379
LEU 3420.0165
ALA 3430.0119
THR 3440.0180
SER 3450.0071
PRO 3460.0051
PRO 3470.0135
ASP 3480.0207
SER 3490.0127
PHE 3500.0230
LEU 3510.0051
ASP 3520.0280
ASP 3530.0239
HIS 3540.0225
HIS 3550.0152
LEU 3560.0143
THR 3570.0169
ARG 3580.0228
PRO 3590.0080
HIS 3600.0087
PRO 3610.0057
GLU 3620.0014
ARG 3630.0030
VAL 3640.0029
PRO 3650.0021
PHE 3660.0037
LEU 3670.0044
VAL 3680.0035
ALA 3690.0062
GLU 3700.0055
THR 3710.0038
PRO 3720.0057
ARG 3730.0023
ALA 3740.0040
ALA 3940.0040
LYS 3950.0028
TRP 3960.0015
HIS 3970.0025
LEU 3980.0026
GLY 3990.0047
ILE 4000.0113
ARG 4010.0092
SER 4020.0119
GLN 4030.0181
SER 4040.0117
ARG 4050.0053
PRO 4060.0007
ASN 4070.0055
ASP 4080.0060
ILE 4090.0061
MET 4100.0075
ALA 4110.0092
GLU 4120.0083
VAL 4130.0075
CYS 4140.0064
ARG 4150.0058
ALA 4160.0075
ILE 4170.0058
LYS 4180.0082
GLN 4190.0108
LEU 4200.0108
ASP 4210.0099
TYR 4220.0081
GLU 4230.0098
TRP 4240.0082
LYS 4250.0091
VAL 4260.0090
VAL 4270.0103
ASN 4280.0071
PRO 4290.0039
TYR 4300.0033
TYR 4310.0054
LEU 4320.0059
ARG 4330.0077
VAL 4340.0061
ARG 4350.0065
ARG 4360.0078
LYS 4370.0057
ASN 4380.0078
PRO 4390.0217
VAL 4400.0240
THR 4410.0203
SER 4420.0163
THR 4430.0090
PHE 4440.0015
SER 4450.0028
LYS 4460.0040
MET 4470.0045
SER 4480.0060
LEU 4490.0053
GLN 4500.0056
LEU 4510.0042
TYR 4520.0024
GLN 4530.0062
VAL 4540.0079
ASP 4550.0173
SER 4560.0229
ARG 4570.0211
THR 4580.0157
TYR 4590.0075
LEU 4600.0049
LEU 4610.0061
ASP 4620.0064
PHE 4630.0056
ARG 4640.0052
SER 4650.0047
ILE 4660.0046
ASP 4670.0042
ASP 4680.0041
GLU 4690.0022
ILE 4700.0043
LYS 2030.0178
SER 2040.0111
PRO 2050.0031
PRO 2060.0015
ILE 2070.0016
LEU 2080.0022
PRO 2090.0032
PRO 2100.0034
HIS 2110.0026
LEU 2120.0013
LEU 2130.0021
GLN 2140.0038
VAL 2150.0045
ILE 2160.0051
LEU 2170.0041
ASN 2180.0043
LYS 2190.0046
ASP 2200.0035
THR 2210.0108
ASN 2220.0107
ILE 2230.0099
SER 2240.0124
CYS 2250.0123
ASP 2260.0096
PRO 2270.0108
ALA 2280.0103
LEU 2290.0110
LEU 2300.0116
PRO 2310.0128
GLU 2320.0145
PRO 2330.0087
ASN 2340.0062
HIS 2350.0065
VAL 2360.0038
MET 2370.0023
LEU 2380.0041
ASN 2390.0023
HIS 2400.0026
LEU 2410.0029
TYR 2420.0008
ALA 2430.0014
LEU 2440.0022
SER 2450.0036
ILE 2460.0041
LYS 2470.0102
ASP 2480.0108
SER 2490.0044
VAL 2500.0070
MET 2510.0047
VAL 2520.0040
LEU 2530.0034
SER 2540.0029
ALA 2550.0020
THR 2560.0040
HIS 2570.0054
ARG 2580.0092
TYR 2590.0078
LYS 2600.0196
LYS 2610.0297
LYS 2620.0236
TYR 2630.0125
VAL 2640.0105
THR 2650.0092
THR 2660.0038
LEU 2670.0043
LEU 2680.0050
TYR 2690.0074
LYS 2700.0079
PRO 2710.0085
PRO 5280.0319
GLY 5290.0168
SER 5300.0098
HIS 5310.0022
THR 5320.0039
ILE 5330.0050
GLU 5340.0024
PHE 5350.0030
PHE 5360.0048
GLU 5370.0043
MET 5380.0043
CYS 5390.0045
ALA 5400.0065
ASN 5410.0082
LEU 5420.0063
ILE 5430.0097
LYS 5440.0170
ILE 5450.0191
LEU 5460.0194
ALA 5470.0334
GLN 5480.0501

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.