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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0587
ARG 100.0186
VAL 110.0143
LYS 120.0106
ILE 130.0107
GLY 140.0111
HIS 150.0065
TYR 160.0054
ILE 170.0070
LEU 180.0061
GLY 190.0125
ASP 200.0158
THR 210.0137
LEU 220.0162
GLY 230.0167
VAL 240.0187
GLY 250.0115
THR 260.0179
PHE 270.0122
GLY 280.0147
LYS 290.0111
VAL 300.0111
LYS 310.0083
VAL 320.0085
GLY 330.0055
LYS 340.0073
HIS 350.0114
GLU 360.0115
LEU 370.0226
THR 380.0259
GLY 390.0169
HIS 400.0110
LYS 410.0084
VAL 420.0085
ALA 430.0083
VAL 440.0080
LYS 450.0118
ILE 460.0126
LEU 470.0140
ASN 480.0138
ARG 490.0095
GLN 500.0091
LYS 510.0152
ILE 520.0117
ARG 530.0387
SER 540.0526
LEU 550.0286
ASP 560.0140
VAL 570.0177
VAL 580.0218
GLY 590.0292
LYS 600.0246
ILE 610.0201
ARG 620.0214
ARG 630.0212
GLU 640.0163
ILE 650.0157
GLN 660.0182
ASN 670.0138
LEU 680.0107
LYS 690.0142
LEU 700.0161
PHE 710.0107
ARG 720.0109
HIS 730.0096
PRO 740.0098
HIS 750.0083
ILE 760.0047
ILE 770.0026
LYS 780.0049
LEU 790.0048
TYR 800.0048
GLN 810.0068
VAL 820.0091
ILE 830.0104
SER 840.0132
THR 850.0282
PRO 860.0329
SER 870.0258
ASP 880.0172
ILE 890.0131
PHE 900.0129
MET 910.0084
VAL 920.0053
MET 930.0060
GLU 940.0052
TYR 950.0076
VAL 960.0070
SER 970.0131
GLY 980.0134
GLY 990.0110
GLU 1000.0059
LEU 1010.0060
PHE 1020.0065
ASP 1030.0108
TYR 1040.0096
ILE 1050.0091
CYS 1060.0185
LYS 1070.0197
ASN 1080.0151
GLY 1090.0053
ARG 1100.0071
LEU 1110.0071
ASP 1120.0077
GLU 1130.0072
LYS 1140.0058
GLU 1150.0060
SER 1160.0059
ARG 1170.0055
ARG 1180.0047
LEU 1190.0051
PHE 1200.0044
GLN 1210.0045
GLN 1220.0054
ILE 1230.0045
LEU 1240.0022
SER 1250.0029
GLY 1260.0043
VAL 1270.0043
ASP 1280.0031
TYR 1290.0032
CYS 1300.0064
HIS 1310.0076
ARG 1320.0054
HIS 1330.0057
MET 1340.0090
VAL 1350.0101
VAL 1360.0102
HIS 1370.0097
ARG 1380.0104
ASP 1390.0078
LEU 1400.0061
LYS 1410.0048
PRO 1420.0029
GLU 1430.0027
ASN 1440.0028
VAL 1450.0019
LEU 1460.0042
LEU 1470.0077
ASP 1480.0132
ALA 1490.0269
HIS 1500.0268
MET 1510.0126
ASN 1520.0090
ALA 1530.0045
LYS 1540.0034
ILE 1550.0021
ALA 1560.0033
ASP 1570.0079
PHE 1580.0109
GLY 1590.0139
LEU 1600.0125
SER 1610.0130
ASN 1620.0133
MET 1630.0120
MET 1640.0110
SER 1650.0116
ASP 1660.0127
GLY 1670.0101
GLU 1680.0103
PHE 1690.0076
LEU 1700.0076
ARG 1710.0059
SER 1730.0057
CYS 1740.0064
GLY 1750.0083
SER 1760.0039
PRO 1770.0043
ASN 1780.0058
TYR 1790.0050
ALA 1800.0055
ALA 1810.0064
PRO 1820.0069
GLU 1830.0061
VAL 1840.0051
ILE 1850.0049
SER 1860.0053
GLY 1870.0030
ARG 1880.0033
LEU 1890.0043
TYR 1900.0068
ALA 1910.0089
GLY 1920.0089
PRO 1930.0093
GLU 1940.0077
VAL 1950.0074
ASP 1960.0075
ILE 1970.0061
TRP 1980.0062
SER 1990.0063
SER 2000.0049
GLY 2010.0051
VAL 2020.0057
ILE 2030.0051
LEU 2040.0049
TYR 2050.0067
ALA 2060.0068
LEU 2070.0063
LEU 2080.0067
CYS 2090.0087
GLY 2100.0096
THR 2110.0095
LEU 2120.0079
PRO 2130.0090
PHE 2140.0083
ASP 2150.0070
ASP 2160.0082
ASP 2170.0172
HIS 2180.0143
VAL 2190.0158
PRO 2200.0212
THR 2210.0145
LEU 2220.0104
PHE 2230.0130
LYS 2240.0154
LYS 2250.0137
ILE 2260.0127
CYS 2270.0147
ASP 2280.0152
GLY 2290.0164
ILE 2300.0150
PHE 2310.0148
TYR 2320.0158
THR 2330.0158
PRO 2340.0189
GLN 2350.0197
TYR 2360.0167
LEU 2370.0133
ASN 2380.0107
PRO 2390.0066
SER 2400.0048
VAL 2410.0061
ILE 2420.0066
SER 2430.0047
LEU 2440.0046
LEU 2450.0058
LYS 2460.0061
HIS 2470.0047
MET 2480.0052
LEU 2490.0058
GLN 2500.0057
VAL 2510.0071
ASP 2520.0066
PRO 2530.0069
MET 2540.0067
LYS 2550.0053
ARG 2560.0049
ALA 2570.0048
THR 2580.0045
ILE 2590.0032
LYS 2600.0054
ASP 2610.0063
ILE 2620.0038
ARG 2630.0077
GLU 2640.0093
HIS 2650.0071
GLU 2660.0092
TRP 2670.0061
PHE 2680.0062
LYS 2690.0107
GLN 2700.0119
ASP 2710.0136
LEU 2720.0140
PRO 2730.0213
LYS 2740.0301
TYR 2750.0230
LEU 2760.0148
PHE 2770.0136
PRO 2780.0104
GLU 2790.0356
ASP 2800.0489
ALA 3210.0184
VAL 3220.0200
ALA 3230.0135
TYR 3240.0269
HIS 3250.0228
LEU 3260.0133
ILE 3270.0121
ILE 3280.0052
ASP 3290.0094
ASN 3300.0035
ARG 3310.0198
ARG 3320.0231
ILE 3330.0209
MET 3340.0230
ASN 3350.0254
GLU 3360.0292
ALA 3370.0356
LYS 3380.0092
ASP 3390.0360
PHE 3400.0481
TYR 3410.0391
LEU 3420.0108
ALA 3430.0082
THR 3440.0108
SER 3450.0062
PRO 3460.0086
PRO 3470.0128
ASP 3480.0193
SER 3490.0136
PHE 3500.0299
LEU 3510.0226
ASP 3520.0340
ASP 3530.0446
HIS 3540.0212
HIS 3550.0110
LEU 3560.0105
THR 3570.0199
ARG 3580.0137
PRO 3590.0084
HIS 3600.0079
PRO 3610.0060
GLU 3620.0063
ARG 3630.0065
VAL 3640.0031
PRO 3650.0019
PHE 3660.0049
LEU 3670.0013
VAL 3680.0052
ALA 3690.0087
GLU 3700.0082
THR 3710.0066
PRO 3720.0096
ARG 3730.0076
ALA 3740.0094
ALA 3940.0137
LYS 3950.0093
TRP 3960.0048
HIS 3970.0054
LEU 3980.0067
GLY 3990.0100
ILE 4000.0167
ARG 4010.0121
SER 4020.0117
GLN 4030.0168
SER 4040.0170
ARG 4050.0131
PRO 4060.0063
ASN 4070.0065
ASP 4080.0102
ILE 4090.0081
MET 4100.0053
ALA 4110.0061
GLU 4120.0068
VAL 4130.0057
CYS 4140.0056
ARG 4150.0095
ALA 4160.0095
ILE 4170.0057
LYS 4180.0117
GLN 4190.0155
LEU 4200.0117
ASP 4210.0078
TYR 4220.0025
GLU 4230.0061
TRP 4240.0067
LYS 4250.0109
VAL 4260.0117
VAL 4270.0153
ASN 4280.0133
PRO 4290.0094
TYR 4300.0059
TYR 4310.0086
LEU 4320.0080
ARG 4330.0096
VAL 4340.0069
ARG 4350.0069
ARG 4360.0081
LYS 4370.0047
ASN 4380.0052
PRO 4390.0133
VAL 4400.0137
THR 4410.0101
SER 4420.0075
THR 4430.0061
PHE 4440.0082
SER 4450.0109
LYS 4460.0113
MET 4470.0123
SER 4480.0128
LEU 4490.0113
GLN 4500.0109
LEU 4510.0078
TYR 4520.0060
GLN 4530.0051
VAL 4540.0059
ASP 4550.0069
SER 4560.0090
ARG 4570.0124
THR 4580.0111
TYR 4590.0084
LEU 4600.0096
LEU 4610.0112
ASP 4620.0120
PHE 4630.0119
ARG 4640.0121
SER 4650.0125
ILE 4660.0131
ASP 4670.0144
ASP 4680.0141
GLU 4690.0157
ILE 4700.0165
LYS 2030.0086
SER 2040.0068
PRO 2050.0041
PRO 2060.0026
ILE 2070.0027
LEU 2080.0035
PRO 2090.0029
PRO 2100.0043
HIS 2110.0060
LEU 2120.0040
LEU 2130.0035
GLN 2140.0068
VAL 2150.0086
ILE 2160.0102
LEU 2170.0102
ASN 2180.0097
LYS 2190.0108
ASP 2200.0105
THR 2210.0131
ASN 2220.0111
ILE 2230.0109
SER 2240.0083
CYS 2250.0078
ASP 2260.0075
PRO 2270.0116
ALA 2280.0141
LEU 2290.0115
LEU 2300.0148
PRO 2310.0129
GLU 2320.0116
PRO 2330.0117
ASN 2340.0123
HIS 2350.0113
VAL 2360.0102
MET 2370.0063
LEU 2380.0071
ASN 2390.0061
HIS 2400.0059
LEU 2410.0058
TYR 2420.0027
ALA 2430.0042
LEU 2440.0065
SER 2450.0115
ILE 2460.0047
LYS 2470.0064
ASP 2480.0104
SER 2490.0066
VAL 2500.0043
MET 2510.0063
VAL 2520.0042
LEU 2530.0029
SER 2540.0042
ALA 2550.0030
THR 2560.0055
HIS 2570.0083
ARG 2580.0144
TYR 2590.0174
LYS 2600.0235
LYS 2610.0586
LYS 2620.0583
TYR 2630.0198
VAL 2640.0185
THR 2650.0150
THR 2660.0046
LEU 2670.0059
LEU 2680.0067
TYR 2690.0051
LYS 2700.0069
PRO 2710.0109
PRO 5280.0128
GLY 5290.0064
SER 5300.0108
HIS 5310.0109
THR 5320.0098
ILE 5330.0101
GLU 5340.0103
PHE 5350.0095
PHE 5360.0088
GLU 5370.0093
MET 5380.0093
CYS 5390.0100
ALA 5400.0111
ASN 5410.0082
LEU 5420.0088
ILE 5430.0163
LYS 5440.0196
ILE 5450.0190
LEU 5460.0233
ALA 5470.0406
GLN 5480.0587

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.